RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 POLRMTO00411 1230 aaKnown RBP12.65□□□□□ -0.38
SNX17-207ENST00000489402 CYP19A1P11511 503 aaPredicted RBP12.65□□□□□ -0.38
SNX17-207ENST00000489402 C9orf131Q5VYM1 1079 aa12.65□□□□□ -0.38
SNX17-207ENST00000489402 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
SNX17-207ENST00000489402 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
SNX17-207ENST00000489402 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
SNX17-207ENST00000489402 TM4SF1P30408 202 aa12.64□□□□□ -0.39
SNX17-207ENST00000489402 CHRNA5P30532 468 aa12.64□□□□□ -0.39
SNX17-207ENST00000489402 APLP1P51693 650 aa12.64□□□□□ -0.39
SNX17-207ENST00000489402 C16orf71Q8IYS4 520 aaPredicted RBP12.64□□□□□ -0.39
SNX17-207ENST00000489402 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
SNX17-207ENST00000489402 VSIG10Q8N0Z9 540 aa12.64□□□□□ -0.39
SNX17-207ENST00000489402 NARFQ9UHQ1 456 aa12.64□□□□□ -0.39
SNX17-207ENST00000489402 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
SNX17-207ENST00000489402 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
SNX17-207ENST00000489402 NMRK2Q9NPI5 230 aa12.63□□□□□ -0.39
SNX17-207ENST00000489402 RNF181Q9P0P0 153 aa12.63□□□□□ -0.39
SNX17-207ENST00000489402 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
SNX17-207ENST00000489402 COL3A1P02461 1466 aaPredicted RBP12.63□□□□□ -0.39
SNX17-207ENST00000489402 KDM2BQ8NHM5 1336 aa12.62□□□□□ -0.39
SNX17-207ENST00000489402 NRXN2Q9P2S2 1712 aa12.62□□□□□ -0.39
SNX17-207ENST00000489402 NFIXQ14938 502 aa12.62□□□□□ -0.39
SNX17-207ENST00000489402 SBF1O95248 1867 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
SNX17-207ENST00000489402 NPC1L1Q9UHC9 1359 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 U2SURPO15042 1029 aaKnown RBP12.61□□□□□ -0.39
SNX17-207ENST00000489402 STARD3NLO95772 234 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 SERPINB2P05120 415 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
SNX17-207ENST00000489402 PRELPP51888 382 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 TEFQ10587 303 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
SNX17-207ENST00000489402 A0A087WZG4 1122 aa12.6□□□□□ -0.39
SNX17-207ENST00000489402 GNAT3A8MTJ3 354 aa12.6□□□□□ -0.39
SNX17-207ENST00000489402 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
SNX17-207ENST00000489402 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
SNX17-207ENST00000489402 KCNQ3O43525 872 aa12.59□□□□□ -0.39
SNX17-207ENST00000489402 TEX13AQ9BXU3 409 aaPredicted RBP12.59□□□□□ -0.39
SNX17-207ENST00000489402 PCNTO95613 3336 aa12.59□□□□□ -0.39
SNX17-207ENST00000489402 WDR90Q96KV7 1748 aa12.59□□□□□ -0.39
SNX17-207ENST00000489402 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.39
SNX17-207ENST00000489402 CARMIL3Q8ND23 1372 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 HEG1Q9ULI3 1381 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 SCN7AQ01118 1682 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 H0YIN7 160 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 BICDL1Q6ZP65 573 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.4
SNX17-207ENST00000489402 CCDC24Q8N4L8 307 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 TTLL6Q8N841 843 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 PHACTR3Q96KR7 559 aa12.58□□□□□ -0.4
SNX17-207ENST00000489402 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
SNX17-207ENST00000489402 ZC3H4Q9UPT8 1303 aaKnown RBP12.58□□□□□ -0.4
SNX17-207ENST00000489402 HTRA3P83110 453 aa12.57□□□□□ -0.4
SNX17-207ENST00000489402 RASSF7Q02833 373 aa12.57□□□□□ -0.4
SNX17-207ENST00000489402 FSTL1Q12841 308 aa12.57□□□□□ -0.4
SNX17-207ENST00000489402 C2CD5Q86YS7 1000 aa12.57□□□□□ -0.4
SNX17-207ENST00000489402 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
SNX17-207ENST00000489402 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
SNX17-207ENST00000489402 LMNB1P20700 586 aa12.56□□□□□ -0.4
SNX17-207ENST00000489402 EIF5P55010 431 aaKnown RBP12.56□□□□□ -0.4
SNX17-207ENST00000489402 FMNL2Q96PY5 1086 aa12.56□□□□□ -0.4
SNX17-207ENST00000489402 RRAGCQ9HB90 399 aa12.56□□□□□ -0.4
SNX17-207ENST00000489402 TIAM2Q8IVF5 1701 aa12.56□□□□□ -0.4
SNX17-207ENST00000489402 CCDC88AQ3V6T2 1871 aa12.55□□□□□ -0.4
SNX17-207ENST00000489402 PRAMEF22A3QJZ6 481 aa12.55□□□□□ -0.4
SNX17-207ENST00000489402 NPHP1O15259 732 aa12.55□□□□□ -0.4
SNX17-207ENST00000489402 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
SNX17-207ENST00000489402 PIP4K2AP48426 406 aaPredicted RBP12.55□□□□□ -0.4
SNX17-207ENST00000489402 PDZRN3Q9UPQ7 1066 aa12.55□□□□□ -0.4
SNX17-207ENST00000489402 ANKRD31Q8N7Z5 1873 aa12.55□□□□□ -0.4
SNX17-207ENST00000489402 BTBD11A6QL63 1104 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 PDE6BP35913 854 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 TBC1D9BQ66K14 1250 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 DNAJC5GQ8N7S2 189 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 SMC1BQ8NDV3 1235 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 TBC1D2BQ9UPU7 963 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 NUDCQ9Y266 331 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
SNX17-207ENST00000489402 A1BGP04217 495 aa12.53□□□□□ -0.4
SNX17-207ENST00000489402 PRKAR2BP31323 418 aa12.53□□□□□ -0.4
SNX17-207ENST00000489402 ZNF622Q969S3 477 aaKnown RBP eCLIP12.53□□□□□ -0.4
SNX17-207ENST00000489402 BRIP1Q9BX63 1249 aa12.53□□□□□ -0.4
SNX17-207ENST00000489402 BCORQ6W2J9 1755 aa12.53□□□□□ -0.4
SNX17-207ENST00000489402 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
SNX17-207ENST00000489402 GLTPD2A6NH11 291 aa12.52□□□□□ -0.41
SNX17-207ENST00000489402 VEGFAP15692 232 aaPredicted RBP12.52□□□□□ -0.41
SNX17-207ENST00000489402 CNBD1Q8NA66 436 aa12.52□□□□□ -0.41
SNX17-207ENST00000489402 RTF1Q92541 710 aaKnown RBP12.52□□□□□ -0.41
SNX17-207ENST00000489402 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
SNX17-207ENST00000489402 RSPH6AQ9H0K4 717 aa12.52□□□□□ -0.41
SNX17-207ENST00000489402 NFKBIEO00221 500 aa12.51□□□□□ -0.41
SNX17-207ENST00000489402 ST5P78524 1137 aa12.51□□□□□ -0.41
SNX17-207ENST00000489402 DCTN1Q14203 1278 aa12.51□□□□□ -0.41
SNX17-207ENST00000489402 PRR5LQ6MZQ0 368 aa12.51□□□□□ -0.41
SNX17-207ENST00000489402 DPY19L2Q6NUT2 758 aa12.51□□□□□ -0.41
SNX17-207ENST00000489402 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
SNX17-207ENST00000489402 KLRG1Q96E93 195 aa12.51□□□□□ -0.41
SNX17-207ENST00000489402 CACNA1SQ13698 1873 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms