RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 DDR1Q08345 913 aa17.89■□□□□ 0.45
LMO4-203ENST00000489303 VSIG10Q8N0Z9 540 aa17.89■□□□□ 0.45
LMO4-203ENST00000489303 BCS1LQ9Y276 419 aa17.89■□□□□ 0.45
LMO4-203ENST00000489303 KCNA3P22001 575 aa17.88■□□□□ 0.45
LMO4-203ENST00000489303 GPBP1L1Q9HC44 474 aaPredicted RBP17.88■□□□□ 0.45
LMO4-203ENST00000489303 CEMIPQ8WUJ3 1361 aa17.88■□□□□ 0.45
LMO4-203ENST00000489303 BTBD11A6QL63 1104 aa17.87■□□□□ 0.45
LMO4-203ENST00000489303 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
LMO4-203ENST00000489303 PARP3Q9Y6F1 533 aa17.87■□□□□ 0.45
LMO4-203ENST00000489303 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
LMO4-203ENST00000489303 KCPQ6ZWJ8 1503 aa17.87■□□□□ 0.45
LMO4-203ENST00000489303 TGFB2P61812 414 aa17.86■□□□□ 0.45
LMO4-203ENST00000489303 MCM10Q7L590 875 aa17.86■□□□□ 0.45
LMO4-203ENST00000489303 TEX13AQ9BXU3 409 aaPredicted RBP17.86■□□□□ 0.45
LMO4-203ENST00000489303 CCDC87Q9NVE4 849 aa17.86■□□□□ 0.45
LMO4-203ENST00000489303 BRCA1P38398 1863 aaKnown RBP17.86■□□□□ 0.45
LMO4-203ENST00000489303 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
LMO4-203ENST00000489303 STARD3NLO95772 234 aa17.85■□□□□ 0.45
LMO4-203ENST00000489303 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
LMO4-203ENST00000489303 WDR43Q15061 677 aaKnown RBP eCLIP17.85■□□□□ 0.45
LMO4-203ENST00000489303 FMNL2Q96PY5 1086 aa17.85■□□□□ 0.45
LMO4-203ENST00000489303 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
LMO4-203ENST00000489303 NFE2L2Q16236 605 aa17.84■□□□□ 0.45
LMO4-203ENST00000489303 USPL1Q5W0Q7 1092 aa17.84■□□□□ 0.45
LMO4-203ENST00000489303 PLEKHF1Q96S99 279 aa17.84■□□□□ 0.45
LMO4-203ENST00000489303 ZBTB1Q9Y2K1 713 aa17.84■□□□□ 0.45
LMO4-203ENST00000489303 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
LMO4-203ENST00000489303 CHRNA5P30532 468 aa17.83■□□□□ 0.44
LMO4-203ENST00000489303 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.44
LMO4-203ENST00000489303 ZNF496Q96IT1 587 aaPredicted RBP17.83■□□□□ 0.44
LMO4-203ENST00000489303 POLRMTO00411 1230 aaKnown RBP17.82■□□□□ 0.44
LMO4-203ENST00000489303 TM4SF1P30408 202 aa17.82■□□□□ 0.44
LMO4-203ENST00000489303 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
LMO4-203ENST00000489303 CEP350Q5VT06 3117 aa17.82■□□□□ 0.44
LMO4-203ENST00000489303 HEG1Q9ULI3 1381 aa17.81■□□□□ 0.44
LMO4-203ENST00000489303 KIF3CO14782 793 aa17.81■□□□□ 0.44
LMO4-203ENST00000489303 ZPR1O75312 459 aa17.81■□□□□ 0.44
LMO4-203ENST00000489303 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
LMO4-203ENST00000489303 PNISRQ8TF01 805 aaKnown RBP17.81■□□□□ 0.44
LMO4-203ENST00000489303 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
LMO4-203ENST00000489303 NPM2Q86SE8 214 aaKnown RBP17.8■□□□□ 0.44
LMO4-203ENST00000489303 UBR2Q8IWV8 1755 aa17.8■□□□□ 0.44
LMO4-203ENST00000489303 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
LMO4-203ENST00000489303 LMOD3Q0VAK6 560 aa17.79■□□□□ 0.44
LMO4-203ENST00000489303 NFIXQ14938 502 aa17.79■□□□□ 0.44
LMO4-203ENST00000489303 AFDNP55196 1824 aaKnown RBP17.79■□□□□ 0.44
LMO4-203ENST00000489303 COL15A1P39059 1388 aa17.79■□□□□ 0.44
LMO4-203ENST00000489303 A0A087WZG4 1122 aa17.78■□□□□ 0.44
LMO4-203ENST00000489303 RIPK4P57078 832 aa17.78■□□□□ 0.44
LMO4-203ENST00000489303 KCNQ3O43525 872 aa17.77■□□□□ 0.44
LMO4-203ENST00000489303 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
LMO4-203ENST00000489303 PIM2Q9P1W9 311 aa17.77■□□□□ 0.44
LMO4-203ENST00000489303 NARFQ9UHQ1 456 aa17.77■□□□□ 0.44
LMO4-203ENST00000489303 ARFGEF1Q9Y6D6 1849 aa17.77■□□□□ 0.43
LMO4-203ENST00000489303 SIPA1L3O60292 1781 aaPredicted RBP17.76■□□□□ 0.43
LMO4-203ENST00000489303 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
LMO4-203ENST00000489303 NMRK2Q9NPI5 230 aa17.76■□□□□ 0.43
LMO4-203ENST00000489303 DALRD3Q5D0E6 543 aaKnown RBP17.75■□□□□ 0.43
LMO4-203ENST00000489303 C9orf131Q5VYM1 1079 aa17.75■□□□□ 0.43
LMO4-203ENST00000489303 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
LMO4-203ENST00000489303 ZNF330Q9Y3S2 320 aaPredicted RBP17.75■□□□□ 0.43
LMO4-203ENST00000489303 CARMIL3Q8ND23 1372 aa17.75■□□□□ 0.43
LMO4-203ENST00000489303 TMPOP42166 694 aaKnown RBP17.74■□□□□ 0.43
LMO4-203ENST00000489303 BICDL1Q6ZP65 573 aa17.74■□□□□ 0.43
LMO4-203ENST00000489303 ADAMTS8Q9UP79 889 aa17.74■□□□□ 0.43
LMO4-203ENST00000489303 NRXN2Q9P2S2 1712 aa17.74■□□□□ 0.43
LMO4-203ENST00000489303 ANP32CO43423 234 aa17.73■□□□□ 0.43
LMO4-203ENST00000489303 SERPINB2P05120 415 aa17.73■□□□□ 0.43
LMO4-203ENST00000489303 HSPA6P17066 643 aa17.73■□□□□ 0.43
LMO4-203ENST00000489303 IL6STP40189 918 aaPredicted RBP17.73■□□□□ 0.43
LMO4-203ENST00000489303 EIF5P55010 431 aaKnown RBP17.73■□□□□ 0.43
LMO4-203ENST00000489303 CCDC24Q8N4L8 307 aa17.73■□□□□ 0.43
LMO4-203ENST00000489303 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
LMO4-203ENST00000489303 MIS18AQ9NYP9 233 aa17.73■□□□□ 0.43
LMO4-203ENST00000489303 A1BGP04217 495 aa17.72■□□□□ 0.43
LMO4-203ENST00000489303 PRELPP51888 382 aa17.72■□□□□ 0.43
LMO4-203ENST00000489303 NEUROD2Q15784 382 aa17.72■□□□□ 0.43
LMO4-203ENST00000489303 USP16Q9Y5T5 823 aa17.72■□□□□ 0.43
LMO4-203ENST00000489303 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
LMO4-203ENST00000489303 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
LMO4-203ENST00000489303 RASSF7Q02833 373 aa17.71■□□□□ 0.43
LMO4-203ENST00000489303 TBC1D9BQ66K14 1250 aa17.71■□□□□ 0.43
LMO4-203ENST00000489303 TBC1D2BQ9UPU7 963 aa17.71■□□□□ 0.43
LMO4-203ENST00000489303 RRP7AQ9Y3A4 280 aaKnown RBP17.71■□□□□ 0.43
LMO4-203ENST00000489303 TSPYL4Q9UJ04 414 aa17.7■□□□□ 0.42
LMO4-203ENST00000489303 SBF1O95248 1867 aa17.69■□□□□ 0.42
LMO4-203ENST00000489303 BABAM1Q9NWV8 329 aa17.69■□□□□ 0.42
LMO4-203ENST00000489303 RNF181Q9P0P0 153 aa17.69■□□□□ 0.42
LMO4-203ENST00000489303 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
LMO4-203ENST00000489303 ANKRD31Q8N7Z5 1873 aa17.68■□□□□ 0.42
LMO4-203ENST00000489303 DLEC1Q9Y238 1755 aa17.67■□□□□ 0.42
LMO4-203ENST00000489303 DZIP3Q86Y13 1208 aaKnown RBP17.67■□□□□ 0.42
LMO4-203ENST00000489303 C2CD5Q86YS7 1000 aa17.67■□□□□ 0.42
LMO4-203ENST00000489303 SCN7AQ01118 1682 aa17.67■□□□□ 0.42
LMO4-203ENST00000489303 DLG5Q8TDM6 1919 aa17.66■□□□□ 0.42
LMO4-203ENST00000489303 TOMM70O94826 608 aa17.65■□□□□ 0.42
LMO4-203ENST00000489303 COL11A2P13942 1736 aaPredicted RBP17.64■□□□□ 0.41
LMO4-203ENST00000489303 CAMTA2O94983 1202 aa17.64■□□□□ 0.41
LMO4-203ENST00000489303 HTRA3P83110 453 aa17.64■□□□□ 0.41
LMO4-203ENST00000489303 PRR5LQ6MZQ0 368 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms