RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 DCAF5Q96JK2 942 aa22.59■■□□□ 1.21
POLR2J3-205ENST00000489144 PDZRN3Q9UPQ7 1066 aa22.59■■□□□ 1.21
POLR2J3-205ENST00000489144 GIGYF1O75420 1035 aaPredicted RBP22.58■■□□□ 1.21
POLR2J3-205ENST00000489144 ZNF496Q96IT1 587 aaPredicted RBP22.58■■□□□ 1.21
POLR2J3-205ENST00000489144 BABAM1Q9NWV8 329 aa22.58■■□□□ 1.21
POLR2J3-205ENST00000489144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.58■■□□□ 1.21
POLR2J3-205ENST00000489144 PTPRCP08575 1304 aa22.58■■□□□ 1.21
POLR2J3-205ENST00000489144 MAP7D2Q96T17 732 aa22.58■■□□□ 1.21
POLR2J3-205ENST00000489144 SCN11AQ9UI33 1791 aa22.58■■□□□ 1.2
POLR2J3-205ENST00000489144 PKD1L3Q7Z443 1732 aa22.57■■□□□ 1.2
POLR2J3-205ENST00000489144 KAT6BQ8WYB5 2073 aa22.57■■□□□ 1.2
POLR2J3-205ENST00000489144 PCDH11XQ9BZA7 1347 aa22.57■■□□□ 1.2
POLR2J3-205ENST00000489144 PCDH11YQ9BZA8 1340 aa22.57■■□□□ 1.2
POLR2J3-205ENST00000489144 SIRT2Q8IXJ6 389 aa22.56■■□□□ 1.2
POLR2J3-205ENST00000489144 SIPA1L3O60292 1781 aaPredicted RBP22.56■■□□□ 1.2
POLR2J3-205ENST00000489144 INTS3Q68E01 1043 aaKnown RBP22.56■■□□□ 1.2
POLR2J3-205ENST00000489144 CCDC9Q9Y3X0 531 aaKnown RBP22.55■■□□□ 1.2
POLR2J3-205ENST00000489144 AIMP1Q12904 312 aaKnown RBP22.55■■□□□ 1.2
POLR2J3-205ENST00000489144 MYL6BP14649 208 aa22.54■■□□□ 1.2
POLR2J3-205ENST00000489144 A0A0G2JS52 829 aa22.54■■□□□ 1.2
POLR2J3-205ENST00000489144 PTCD1O75127 700 aaKnown RBP22.53■■□□□ 1.2
POLR2J3-205ENST00000489144 TTC5Q8N0Z6 440 aa22.53■■□□□ 1.2
POLR2J3-205ENST00000489144 PARP4Q9UKK3 1724 aaKnown RBP22.53■■□□□ 1.2
POLR2J3-205ENST00000489144 ESPNB1AK53 854 aa22.53■■□□□ 1.2
POLR2J3-205ENST00000489144 USP16Q9Y5T5 823 aa22.52■■□□□ 1.2
POLR2J3-205ENST00000489144 ADAMTS7Q9UKP4 1686 aa22.52■■□□□ 1.2
POLR2J3-205ENST00000489144 APBB1O00213 710 aa22.51■■□□□ 1.19
POLR2J3-205ENST00000489144 PI4KAP2A4QPH2 592 aa22.51■■□□□ 1.19
POLR2J3-205ENST00000489144 GOLGA6L3A6NEY3 463 aa22.51■■□□□ 1.19
POLR2J3-205ENST00000489144 PI4KAP1Q8N8J0 262 aa22.51■■□□□ 1.19
POLR2J3-205ENST00000489144 C8orf37Q96NL8 207 aa22.51■■□□□ 1.19
POLR2J3-205ENST00000489144 COL14A1Q05707 1796 aaKnown RBP22.51■■□□□ 1.19
POLR2J3-205ENST00000489144 COL22A1Q8NFW1 1626 aaPredicted RBP22.51■■□□□ 1.19
POLR2J3-205ENST00000489144 ZHX1Q9UKY1 873 aaPredicted RBP22.5■■□□□ 1.19
POLR2J3-205ENST00000489144 SHANK3Q9BYB0 1731 aa22.5■■□□□ 1.19
POLR2J3-205ENST00000489144 HDAC1Q13547 482 aaPredicted RBP22.5■■□□□ 1.19
POLR2J3-205ENST00000489144 FSD2A1L4K1 749 aa22.49■■□□□ 1.19
POLR2J3-205ENST00000489144 UTP14CQ5TAP6 766 aaKnown RBP22.49■■□□□ 1.19
POLR2J3-205ENST00000489144 LNPKQ9C0E8 428 aa22.49■■□□□ 1.19
POLR2J3-205ENST00000489144 C5P01031 1676 aa22.49■■□□□ 1.19
POLR2J3-205ENST00000489144 HSP90AB1P08238 724 aaKnown RBP22.49■■□□□ 1.19
POLR2J3-205ENST00000489144 SYTL4Q96C24 671 aaPredicted RBP22.48■■□□□ 1.19
POLR2J3-205ENST00000489144 HEG1Q9ULI3 1381 aa22.48■■□□□ 1.19
POLR2J3-205ENST00000489144 DBF4Q9UBU7 674 aaPredicted RBP22.47■■□□□ 1.19
POLR2J3-205ENST00000489144 PLCH1Q4KWH8 1693 aa22.47■■□□□ 1.19
POLR2J3-205ENST00000489144 HOXB7P09629 217 aa22.46■■□□□ 1.19
POLR2J3-205ENST00000489144 CCT4P50991 539 aaKnown RBP22.45■■□□□ 1.19
POLR2J3-205ENST00000489144 PDIA6Q15084 440 aa22.45■■□□□ 1.19
POLR2J3-205ENST00000489144 ANKRD45Q5TZF3 282 aa22.45■■□□□ 1.18
POLR2J3-205ENST00000489144 PANK2Q9BZ23 570 aa22.45■■□□□ 1.18
POLR2J3-205ENST00000489144 FMNL2Q96PY5 1086 aa22.45■■□□□ 1.18
POLR2J3-205ENST00000489144 MAP3K2Q9Y2U5 619 aa22.45■■□□□ 1.18
POLR2J3-205ENST00000489144 ADCY9O60503 1353 aa22.44■■□□□ 1.18
POLR2J3-205ENST00000489144 CEP85Q6P2H3 762 aa22.44■■□□□ 1.18
POLR2J3-205ENST00000489144 KIAA1211Q6ZU35 1233 aa22.44■■□□□ 1.18
POLR2J3-205ENST00000489144 ASAP1Q9ULH1 1129 aa22.44■■□□□ 1.18
POLR2J3-205ENST00000489144 MRC1P22897 1456 aa22.44■■□□□ 1.18
POLR2J3-205ENST00000489144 SMC5Q8IY18 1101 aa22.44■■□□□ 1.18
POLR2J3-205ENST00000489144 ATP10DQ9P241 1426 aa22.43■■□□□ 1.18
POLR2J3-205ENST00000489144 SOS1Q07889 1333 aaPredicted RBP22.43■■□□□ 1.18
POLR2J3-205ENST00000489144 CWF19L2Q2TBE0 894 aaKnown RBP22.43■■□□□ 1.18
POLR2J3-205ENST00000489144 CERKQ8TCT0 537 aa22.43■■□□□ 1.18
POLR2J3-205ENST00000489144 NGLY1Q96IV0 654 aa22.43■■□□□ 1.18
POLR2J3-205ENST00000489144 TOGARAM1Q9Y4F4 1720 aa22.43■■□□□ 1.18
POLR2J3-205ENST00000489144 DNAAF4Q8WXU2 420 aa22.43■■□□□ 1.18
POLR2J3-205ENST00000489144 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
POLR2J3-205ENST00000489144 ARXQ96QS3 562 aa22.42■■□□□ 1.18
POLR2J3-205ENST00000489144 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
POLR2J3-205ENST00000489144 LRRFIP2Q9Y608 721 aaKnown RBP22.42■■□□□ 1.18
POLR2J3-205ENST00000489144 EXOC5O00471 708 aa22.42■■□□□ 1.18
POLR2J3-205ENST00000489144 PIGBQ92521 554 aa22.42■■□□□ 1.18
POLR2J3-205ENST00000489144 ACSBG1Q96GR2 724 aa22.42■■□□□ 1.18
POLR2J3-205ENST00000489144 ERBB4Q15303 1308 aa22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 NKX1-1Q15270 411 aaPredicted RBP22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 C8orf34Q49A92 452 aa22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 XAGE3Q8WTP9 111 aa22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 SPATA31A1Q5TZJ5 1347 aa22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 NBPF7P0C2Y1 421 aaPredicted RBP22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 DMTNQ08495 405 aa22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 ZNF330Q9Y3S2 320 aaPredicted RBP22.41■■□□□ 1.18
POLR2J3-205ENST00000489144 DISP2A7MBM2 1401 aa22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 ERVV-2B6SEH9 535 aa22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 SMARCA5O60264 1052 aaPredicted RBP22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 A1BGP04217 495 aa22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 COPS6Q7L5N1 327 aa22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 SRCIN1Q9C0H9 1055 aa22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 DDX21Q9NR30 783 aaKnown RBP eCLIP22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 TMEM51Q9NW97 253 aa22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 TERF1P54274 439 aa22.4■■□□□ 1.18
POLR2J3-205ENST00000489144 FAM98CQ17RN3 349 aaKnown RBP22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 ANKRD44Q8N8A2 993 aa22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 JARID2Q92833 1246 aaPredicted RBP22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 CACNA1FO60840 1977 aa22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 PNMA6EA0A0J9YXQ4 647 aa22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 HSPA1LP34931 641 aa22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 BEND3Q5T5X7 828 aa22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 RBM42Q9BTD8 480 aaKnown RBP22.39■■□□□ 1.17
POLR2J3-205ENST00000489144 NUCB1Q02818 461 aa22.38■■□□□ 1.17
POLR2J3-205ENST00000489144 CHD1LQ86WJ1 897 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 2176.6 ms