RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 ZNF330Q9Y3S2 320 aaPredicted RBP18.01■□□□□ 0.47
UBAP2-211ENST00000488443 KCPQ6ZWJ8 1503 aa18.01■□□□□ 0.47
UBAP2-211ENST00000488443 COL15A1P39059 1388 aa18.01■□□□□ 0.47
UBAP2-211ENST00000488443 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
UBAP2-211ENST00000488443 DIAPH1O60610 1272 aaKnown RBP18■□□□□ 0.47
UBAP2-211ENST00000488443 TOMM70O94826 608 aa18■□□□□ 0.47
UBAP2-211ENST00000488443 CYP19A1P11511 503 aaPredicted RBP18■□□□□ 0.47
UBAP2-211ENST00000488443 RASSF7Q02833 373 aa18■□□□□ 0.47
UBAP2-211ENST00000488443 BICDL1Q6ZP65 573 aa18■□□□□ 0.47
UBAP2-211ENST00000488443 CEP350Q5VT06 3117 aa18■□□□□ 0.47
UBAP2-211ENST00000488443 NFIXQ14938 502 aa17.99■□□□□ 0.47
UBAP2-211ENST00000488443 MRC1P22897 1456 aa17.99■□□□□ 0.47
UBAP2-211ENST00000488443 TM4SF1P30408 202 aa17.98■□□□□ 0.47
UBAP2-211ENST00000488443 HTRA3P83110 453 aa17.98■□□□□ 0.47
UBAP2-211ENST00000488443 SBF1O95248 1867 aa17.97■□□□□ 0.47
UBAP2-211ENST00000488443 APLP1P51693 650 aa17.97■□□□□ 0.47
UBAP2-211ENST00000488443 TTC5Q8N0Z6 440 aa17.97■□□□□ 0.47
UBAP2-211ENST00000488443 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
UBAP2-211ENST00000488443 NARFQ9UHQ1 456 aa17.96■□□□□ 0.47
UBAP2-211ENST00000488443 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
UBAP2-211ENST00000488443 UBR2Q8IWV8 1755 aa17.95■□□□□ 0.46
UBAP2-211ENST00000488443 SERPINB2P05120 415 aa17.95■□□□□ 0.46
UBAP2-211ENST00000488443 CCDC24Q8N4L8 307 aa17.95■□□□□ 0.46
UBAP2-211ENST00000488443 BCL2L12Q9HB09 334 aa17.95■□□□□ 0.46
UBAP2-211ENST00000488443 ZNF219Q9P2Y4 722 aaPredicted RBP17.95■□□□□ 0.46
UBAP2-211ENST00000488443 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
UBAP2-211ENST00000488443 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
UBAP2-211ENST00000488443 C2CD5Q86YS7 1000 aa17.94■□□□□ 0.46
UBAP2-211ENST00000488443 KDM2BQ8NHM5 1336 aa17.94■□□□□ 0.46
UBAP2-211ENST00000488443 TEFQ10587 303 aa17.93■□□□□ 0.46
UBAP2-211ENST00000488443 DLEC1Q9Y238 1755 aa17.92■□□□□ 0.46
UBAP2-211ENST00000488443 TNRC6CQ9HCJ0 1690 aaKnown RBP17.92■□□□□ 0.46
UBAP2-211ENST00000488443 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
UBAP2-211ENST00000488443 PER1O15534 1290 aaPredicted RBP17.91■□□□□ 0.46
UBAP2-211ENST00000488443 STARD3NLO95772 234 aa17.91■□□□□ 0.46
UBAP2-211ENST00000488443 RBM46Q8TBY0 533 aaKnown RBP17.91■□□□□ 0.46
UBAP2-211ENST00000488443 ZNF496Q96IT1 587 aaPredicted RBP17.91■□□□□ 0.46
UBAP2-211ENST00000488443 TBC1D2BQ9UPU7 963 aa17.91■□□□□ 0.46
UBAP2-211ENST00000488443 TIAM2Q8IVF5 1701 aa17.91■□□□□ 0.46
UBAP2-211ENST00000488443 CACNA1SQ13698 1873 aa17.9■□□□□ 0.46
UBAP2-211ENST00000488443 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
UBAP2-211ENST00000488443 NPHP1O15259 732 aa17.9■□□□□ 0.46
UBAP2-211ENST00000488443 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
UBAP2-211ENST00000488443 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.463e-14■□□□□ 8.8
UBAP2-211ENST00000488443 ANKRD31Q8N7Z5 1873 aa17.89■□□□□ 0.45
UBAP2-211ENST00000488443 GNAT3A8MTJ3 354 aa17.89■□□□□ 0.45
UBAP2-211ENST00000488443 H0YIN7 160 aa17.89■□□□□ 0.45
UBAP2-211ENST00000488443 VSIG10Q8N0Z9 540 aa17.89■□□□□ 0.45
UBAP2-211ENST00000488443 TTLL6Q8N841 843 aa17.89■□□□□ 0.45
UBAP2-211ENST00000488443 IL17REQ8NFR9 667 aa17.89■□□□□ 0.45
UBAP2-211ENST00000488443 SIPA1L3O60292 1781 aaPredicted RBP17.89■□□□□ 0.45
UBAP2-211ENST00000488443 SCN7AQ01118 1682 aa17.88■□□□□ 0.45
UBAP2-211ENST00000488443 PIP4K2AP48426 406 aaPredicted RBP17.88■□□□□ 0.45
UBAP2-211ENST00000488443 PRELPP51888 382 aa17.88■□□□□ 0.45
UBAP2-211ENST00000488443 DNAJC5GQ8N7S2 189 aa17.88■□□□□ 0.45
UBAP2-211ENST00000488443 GAS2L2Q8NHY3 880 aa17.88■□□□□ 0.45
UBAP2-211ENST00000488443 HEG1Q9ULI3 1381 aa17.88■□□□□ 0.45
UBAP2-211ENST00000488443 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
UBAP2-211ENST00000488443 KCNQ3O43525 872 aa17.87■□□□□ 0.45
UBAP2-211ENST00000488443 A1BGP04217 495 aa17.87■□□□□ 0.45
UBAP2-211ENST00000488443 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
UBAP2-211ENST00000488443 A0A087WZG4 1122 aa17.86■□□□□ 0.45
UBAP2-211ENST00000488443 LMNB1P20700 586 aa17.86■□□□□ 0.45
UBAP2-211ENST00000488443 PRKAR2BP31323 418 aa17.86■□□□□ 0.45
UBAP2-211ENST00000488443 EIF5P55010 431 aaKnown RBP17.86■□□□□ 0.45
UBAP2-211ENST00000488443 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
UBAP2-211ENST00000488443 C21orf2O43822 256 aa17.85■□□□□ 0.45
UBAP2-211ENST00000488443 FSTL1Q12841 308 aa17.85■□□□□ 0.45
UBAP2-211ENST00000488443 PHACTR3Q96KR7 559 aa17.85■□□□□ 0.45
UBAP2-211ENST00000488443 BTBD11A6QL63 1104 aa17.84■□□□□ 0.45
UBAP2-211ENST00000488443 NFKBIEO00221 500 aa17.84■□□□□ 0.45
UBAP2-211ENST00000488443 FMNL2Q96PY5 1086 aa17.84■□□□□ 0.45
UBAP2-211ENST00000488443 PRR5LQ6MZQ0 368 aa17.83■□□□□ 0.44
UBAP2-211ENST00000488443 SMC1BQ8NDV3 1235 aa17.83■□□□□ 0.44
UBAP2-211ENST00000488443 KLRG1Q96E93 195 aa17.83■□□□□ 0.44
UBAP2-211ENST00000488443 CFAP53Q96M91 514 aa17.83■□□□□ 0.44
UBAP2-211ENST00000488443 PRAMEF22A3QJZ6 481 aa17.82■□□□□ 0.44
UBAP2-211ENST00000488443 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
UBAP2-211ENST00000488443 PDE6BP35913 854 aa17.81■□□□□ 0.44
UBAP2-211ENST00000488443 MCM10Q7L590 875 aa17.81■□□□□ 0.44
UBAP2-211ENST00000488443 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
UBAP2-211ENST00000488443 CNBD1Q8NA66 436 aa17.81■□□□□ 0.44
UBAP2-211ENST00000488443 SETDB2Q96T68 719 aa17.81■□□□□ 0.44
UBAP2-211ENST00000488443 TEX13AQ9BXU3 409 aaPredicted RBP17.81■□□□□ 0.44
UBAP2-211ENST00000488443 BCORQ6W2J9 1755 aa17.81■□□□□ 0.44
UBAP2-211ENST00000488443 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
UBAP2-211ENST00000488443 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
UBAP2-211ENST00000488443 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
UBAP2-211ENST00000488443 VEGFAP15692 232 aaPredicted RBP17.8■□□□□ 0.44
UBAP2-211ENST00000488443 IL6STP40189 918 aaPredicted RBP17.8■□□□□ 0.44
UBAP2-211ENST00000488443 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBAP2-211ENST00000488443 DCTN1Q14203 1278 aa17.8■□□□□ 0.44
UBAP2-211ENST00000488443 RSPH6AQ9H0K4 717 aa17.8■□□□□ 0.44
UBAP2-211ENST00000488443 USP16Q9Y5T5 823 aa17.8■□□□□ 0.44
UBAP2-211ENST00000488443 SLX4Q8IY92 1834 aa17.79■□□□□ 0.44
UBAP2-211ENST00000488443 ST5P78524 1137 aa17.79■□□□□ 0.44
UBAP2-211ENST00000488443 ERFEQ4G0M1 354 aa17.79■□□□□ 0.44
UBAP2-211ENST00000488443 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
UBAP2-211ENST00000488443 BRIP1Q9BX63 1249 aa17.79■□□□□ 0.44
UBAP2-211ENST00000488443 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms