RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 ITGB4P16144 1822 aa3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 PRIM1P49642 420 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 APLP1P51693 650 aa3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 TXNRD1Q16881 649 aa3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 RC3H1Q5TC82 1133 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 SPNS2Q8IVW8 549 aa3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 RBM46Q8TBY0 533 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 NLRP7Q8WX94 980 aa3.89□□□□□ -1.79
DEPDC1-203ENST00000488146 KDRP35968 1356 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 LOC105371045A0A1W2PR82 267 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 C2orf72A6NCS6 295 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 SSFA2P28290 1259 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 JMYQ8N9B5 988 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 CCDC102AQ96A19 550 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 TERF2IPQ9NYB0 399 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 PPP1R1BQ9UD71 204 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 KTN1Q86UP2 1357 aaKnown RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 FAM205CA6NFA0 338 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 TGFB2P61812 414 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 MMRN1Q13201 1228 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 LARP1Q6PKG0 1096 aaKnown RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 MICALL2Q8IY33 904 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 ABTB2Q8N961 1025 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 HS3ST6Q96QI5 342 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 UBR2Q8IWV8 1755 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 SCN7AQ01118 1682 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 CNTNAP4Q9C0A0 1308 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 TRIM37O94972 964 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 TRIM26Q12899 539 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 TMEM132EQ6IEE7 984 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 ERICH6Q7L0X2 663 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 HDGFL2Q7Z4V5 671 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 PLPP6Q8IY26 295 aa3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 MARCH10Q8NA82 808 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 ZNF784Q8NCA9 323 aaPredicted RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 CCDC9Q9Y3X0 531 aaKnown RBP3.88□□□□□ -1.79
DEPDC1-203ENST00000488146 DICER1Q9UPY3 1922 aaKnown RBP3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 PCDH11XQ9BZA7 1347 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 PCDH11YQ9BZA8 1340 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 GIGYF1O75420 1035 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 PDIA6Q15084 440 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 FAM161AQ3B820 660 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 PARP9Q8IXQ6 854 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 ZNF710Q8N1W2 664 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 STK26Q9P289 416 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 FLT4P35916 1363 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 HOXB3P14651 431 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 TTLL12Q14166 644 aaPredicted RBP3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 SYT17Q9BSW7 474 aa3.87□□□□□ -1.79
DEPDC1-203ENST00000488146 TJP1Q07157 1748 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 BCORQ6W2J9 1755 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 PNPLA7Q6ZV29 1317 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 MINK1Q8N4C8 1332 aaPredicted RBP3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 LTBP3Q9NS15 1303 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 HSP90AB1P08238 724 aaKnown RBP3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 HSPA6P17066 643 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 DOK7Q18PE1 504 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 GRIPAP1Q4V328 841 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 XP32Q5T750 250 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 CLUAP1Q96AJ1 413 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 REPIN1Q9BWE0 567 aaKnown RBP3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 ZMYND15Q9H091 742 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 SCN11AQ9UI33 1791 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 NPC1L1Q9UHC9 1359 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 POTEB3A0JP26 581 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 APBB1O00213 710 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 POTEBQ6S5H4 581 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 TMEM92Q6UXU6 159 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 TMC2Q8TDI7 906 aa3.86□□□□□ -1.79
DEPDC1-203ENST00000488146 IBTKQ9P2D0 1353 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 ADAMTSL1Q8N6G6 1762 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 TOM1L2Q6ZVM7 507 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 ANO8Q9HCE9 1232 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 TRAK1Q9UPV9 953 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 ARIH1Q9Y4X5 557 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 SCN4AP35499 1836 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 LAMB1P07942 1786 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 WASHC2AQ641Q2 1341 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 TIAM2Q8IVF5 1701 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 ZNF609O15014 1411 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 RIMBP2O15034 1052 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 HOXB1P14653 301 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 MAP3K9P80192 1104 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 PMFBP1Q8TBY8 1022 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 DCAF11Q8TEB1 546 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 KRTAP3-3Q9BYR6 98 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 KRTAP3-2Q9BYR7 98 aa3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 VIRMAQ69YN4 1812 aaKnown RBP3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 ROCK2O75116 1388 aaKnown RBP3.85□□□□□ -1.79
DEPDC1-203ENST00000488146 SIPA1L3O60292 1781 aaPredicted RBP3.84□□□□□ -1.79
DEPDC1-203ENST00000488146 OSBPP22059 807 aa3.84□□□□□ -1.79
DEPDC1-203ENST00000488146 CABLES1Q8TDN4 633 aa3.84□□□□□ -1.79
DEPDC1-203ENST00000488146 CDHR5Q9HBB8 845 aa3.84□□□□□ -1.79
DEPDC1-203ENST00000488146 MEGF6O75095 1541 aa3.84□□□□□ -1.79
DEPDC1-203ENST00000488146 ERVV-2B6SEH9 535 aa3.84□□□□□ -1.8
DEPDC1-203ENST00000488146 IRF6O14896 467 aa3.84□□□□□ -1.8
DEPDC1-203ENST00000488146 MS4A1P11836 297 aa3.84□□□□□ -1.8
DEPDC1-203ENST00000488146 FOXK1P85037 733 aa3.84□□□□□ -1.8
DEPDC1-203ENST00000488146 XPCQ01831 940 aaPredicted RBP3.84□□□□□ -1.8
DEPDC1-203ENST00000488146 USP47Q96K76 1375 aa3.84□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms