RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 HYPKQ9NX55 129 aa14.12□□□□□ -0.15
HDLBP-242ENST00000488013 PLSCR1O15162 318 aa14.11□□□□□ -0.15
HDLBP-242ENST00000488013 EIF2S2P20042 333 aaKnown RBP14.11□□□□□ -0.15
HDLBP-242ENST00000488013 ATP6V1AP38606 617 aa14.11□□□□□ -0.15
HDLBP-242ENST00000488013 SF3B2Q13435 895 aaKnown RBP14.11□□□□□ -0.15
HDLBP-242ENST00000488013 KRT24Q2M2I5 525 aa14.11□□□□□ -0.15
HDLBP-242ENST00000488013 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
HDLBP-242ENST00000488013 SSH1Q8WYL5 1049 aa14.11□□□□□ -0.15
HDLBP-242ENST00000488013 DDX21Q9NR30 783 aaKnown RBP eCLIP14.11□□□□□ -0.15
HDLBP-242ENST00000488013 CANXP27824 592 aaKnown RBP14.1□□□□□ -0.15
HDLBP-242ENST00000488013 PTPRCP08575 1304 aa14.1□□□□□ -0.15
HDLBP-242ENST00000488013 MRPL50Q8N5N7 158 aaKnown RBP14.09□□□□□ -0.15
HDLBP-242ENST00000488013 API5Q9BZZ5 524 aaKnown RBP14.09□□□□□ -0.15
HDLBP-242ENST00000488013 RNF123Q5XPI4 1314 aa14.09□□□□□ -0.15
HDLBP-242ENST00000488013 DDX58O95786 925 aaKnown RBP14.08□□□□□ -0.16
HDLBP-242ENST00000488013 APBA3O96018 575 aa14.08□□□□□ -0.16
HDLBP-242ENST00000488013 ZKSCAN2Q63HK3 967 aa14.08□□□□□ -0.16
HDLBP-242ENST00000488013 CCNL1Q9UK58 526 aaPredicted RBP14.08□□□□□ -0.16
HDLBP-242ENST00000488013 USP16Q9Y5T5 823 aa14.08□□□□□ -0.16
HDLBP-242ENST00000488013 KCPQ6ZWJ8 1503 aa14.07□□□□□ -0.16
HDLBP-242ENST00000488013 NEFLP07196 543 aa14.07□□□□□ -0.16
HDLBP-242ENST00000488013 CYP19A1P11511 503 aaPredicted RBP14.07□□□□□ -0.16
HDLBP-242ENST00000488013 RRP1P56182 461 aaKnown RBP14.07□□□□□ -0.16
HDLBP-242ENST00000488013 PDE3AQ14432 1141 aa14.07□□□□□ -0.16
HDLBP-242ENST00000488013 RC3H1Q5TC82 1133 aaKnown RBP14.07□□□□□ -0.16
HDLBP-242ENST00000488013 DNAJC10Q8IXB1 793 aa14.07□□□□□ -0.16
HDLBP-242ENST00000488013 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
HDLBP-242ENST00000488013 BCAR3O75815 825 aa14.06□□□□□ -0.16
HDLBP-242ENST00000488013 ATF7IPQ6VMQ6 1270 aa14.06□□□□□ -0.16
HDLBP-242ENST00000488013 CHMP4BQ9H444 224 aaKnown RBP14.06□□□□□ -0.16
HDLBP-242ENST00000488013 CHPF2Q9P2E5 772 aa14.06□□□□□ -0.16
HDLBP-242ENST00000488013 NHSQ6T4R5 1651 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 TOGARAM1Q9Y4F4 1720 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 SIPA1L3O60292 1781 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-242ENST00000488013 KDM3BQ7LBC6 1761 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 IL6STP40189 918 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-242ENST00000488013 BAG6P46379 1132 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 FLIIQ13045 1269 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
HDLBP-242ENST00000488013 SLC4A9Q96Q91 983 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 BCL2L13Q9BXK5 485 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 NOB1Q9ULX3 412 aaKnown RBP14.05□□□□□ -0.16
HDLBP-242ENST00000488013 CNTNAP4Q9C0A0 1308 aa14.05□□□□□ -0.16
HDLBP-242ENST00000488013 A0A087WZG4 1122 aa14.04□□□□□ -0.16
HDLBP-242ENST00000488013 PRAMEF22A3QJZ6 481 aa14.04□□□□□ -0.16
HDLBP-242ENST00000488013 PTF1AQ7RTS3 328 aa14.04□□□□□ -0.16
HDLBP-242ENST00000488013 FTSJ3Q8IY81 847 aaKnown RBP14.04□□□□□ -0.16
HDLBP-242ENST00000488013 NECTIN2Q92692 538 aa14.04□□□□□ -0.16
HDLBP-242ENST00000488013 CCDC87Q9NVE4 849 aa14.04□□□□□ -0.16
HDLBP-242ENST00000488013 DOT1LQ8TEK3 1739 aa14.04□□□□□ -0.16
HDLBP-242ENST00000488013 RGL2O15211 777 aa14.03□□□□□ -0.16
HDLBP-242ENST00000488013 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
HDLBP-242ENST00000488013 FKBP5Q13451 457 aaPredicted RBP14.03□□□□□ -0.16
HDLBP-242ENST00000488013 PDIA6Q15084 440 aa14.03□□□□□ -0.16
HDLBP-242ENST00000488013 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
HDLBP-242ENST00000488013 PAPPAQ13219 1627 aa14.02□□□□□ -0.16
HDLBP-242ENST00000488013 A1BGP04217 495 aa14.02□□□□□ -0.17
HDLBP-242ENST00000488013 ITPK1Q13572 414 aa14.02□□□□□ -0.17
HDLBP-242ENST00000488013 AAMPQ13685 434 aa14.02□□□□□ -0.17
HDLBP-242ENST00000488013 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
HDLBP-242ENST00000488013 DZIP1LQ8IYY4 767 aaKnown RBP14.02□□□□□ -0.17
HDLBP-242ENST00000488013 TCERG1O14776 1098 aaKnown RBP14.01□□□□□ -0.17
HDLBP-242ENST00000488013 TRIM27P14373 513 aa14.01□□□□□ -0.17
HDLBP-242ENST00000488013 MYL6BP14649 208 aa14.01□□□□□ -0.17
HDLBP-242ENST00000488013 INTS5Q6P9B9 1019 aaKnown RBP14.01□□□□□ -0.17
HDLBP-242ENST00000488013 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
HDLBP-242ENST00000488013 KIF6Q6ZMV9 814 aa14.01□□□□□ -0.17
HDLBP-242ENST00000488013 NBPF26B4DH59 902 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 RPS6KA4O75676 772 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 CCT4P50991 539 aaKnown RBP14□□□□□ -0.17
HDLBP-242ENST00000488013 EIF5P55010 431 aaKnown RBP14□□□□□ -0.17
HDLBP-242ENST00000488013 NBPF14Q5TI25 921 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 NBPF10Q6P3W6 841 aaKnown RBP14□□□□□ -0.17
HDLBP-242ENST00000488013 ANKRD13DQ6ZTN6 518 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 COPS6Q7L5N1 327 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 NBPF15Q8N660 670 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 LINC00116Q8NCU8 138 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 FLAD1Q8NFF5 587 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 PLBD2Q8NHP8 589 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 XAGE3Q8WTP9 111 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 AK7Q96M32 723 aa14□□□□□ -0.17
HDLBP-242ENST00000488013 RTCBQ9Y3I0 505 aaKnown RBP14□□□□□ -0.17
HDLBP-242ENST00000488013 ERVV-1B6SEH8 477 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 NEXNQ0ZGT2 675 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 PROSER3Q2NL68 480 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 LRP10Q7Z4F1 713 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 RIC3Q7Z5B4 369 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 HDAC5Q9UQL6 1122 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 ZBTB1Q9Y2K1 713 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
HDLBP-242ENST00000488013 DNAAF4Q8WXU2 420 aa13.98□□□□□ -0.17
HDLBP-242ENST00000488013 CAMKK2Q96RR4 588 aa13.98□□□□□ -0.17
HDLBP-242ENST00000488013 PHAXQ9H814 394 aaKnown RBP13.98□□□□□ -0.17
HDLBP-242ENST00000488013 ITGB4P16144 1822 aa13.98□□□□□ -0.17
HDLBP-242ENST00000488013 ZNF831Q5JPB2 1677 aa13.98□□□□□ -0.17
HDLBP-242ENST00000488013 IBTKQ9P2D0 1353 aaPredicted RBP13.97□□□□□ -0.17
HDLBP-242ENST00000488013 BRWD3Q6RI45 1802 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 ABCC4O15439 1325 aa13.97□□□□□ -0.17
HDLBP-242ENST00000488013 PI4KAP2A4QPH2 592 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms