RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 BCORQ6W2J9 1755 aa22.49■■□□□ 1.19
HMG20B-212ENST00000487894 ANP32CO43423 234 aa22.49■■□□□ 1.19
HMG20B-212ENST00000487894 RIPK4P57078 832 aa22.49■■□□□ 1.19
HMG20B-212ENST00000487894 TAF7Q15545 349 aaPredicted RBP22.49■■□□□ 1.19
HMG20B-212ENST00000487894 SYT17Q9BSW7 474 aa22.48■■□□□ 1.19
HMG20B-212ENST00000487894 COL15A1P39059 1388 aa22.48■■□□□ 1.19
HMG20B-212ENST00000487894 RFC4P35249 363 aa22.47■■□□□ 1.19
HMG20B-212ENST00000487894 RRP7AQ9Y3A4 280 aaKnown RBP22.47■■□□□ 1.19
HMG20B-212ENST00000487894 GYS1P13807 737 aa22.46■■□□□ 1.19
HMG20B-212ENST00000487894 TEX13AQ9BXU3 409 aaPredicted RBP22.46■■□□□ 1.19
HMG20B-212ENST00000487894 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
HMG20B-212ENST00000487894 USP42Q9H9J4 1324 aaKnown RBP22.46■■□□□ 1.19
HMG20B-212ENST00000487894 KIAA1551Q9HCM1 1747 aa22.45■■□□□ 1.19
HMG20B-212ENST00000487894 STARD3NLO95772 234 aa22.45■■□□□ 1.18
HMG20B-212ENST00000487894 LMOD3Q0VAK6 560 aa22.45■■□□□ 1.18
HMG20B-212ENST00000487894 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.18
HMG20B-212ENST00000487894 PRAMEF22A3QJZ6 481 aa22.44■■□□□ 1.18
HMG20B-212ENST00000487894 KLHL34Q8N239 644 aa22.44■■□□□ 1.18
HMG20B-212ENST00000487894 PNISRQ8TF01 805 aaKnown RBP22.44■■□□□ 1.18
HMG20B-212ENST00000487894 SRP68Q9UHB9 627 aaKnown RBP22.44■■□□□ 1.18
HMG20B-212ENST00000487894 NEUROD2Q15784 382 aa22.43■■□□□ 1.18
HMG20B-212ENST00000487894 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
HMG20B-212ENST00000487894 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
HMG20B-212ENST00000487894 NRXN2Q9P2S2 1712 aa22.41■■□□□ 1.18
HMG20B-212ENST00000487894 MMP10P09238 476 aa22.41■■□□□ 1.18
HMG20B-212ENST00000487894 SNRPA1P09661 255 aaKnown RBP22.41■■□□□ 1.18
HMG20B-212ENST00000487894 NLGN1Q8N2Q7 840 aa22.41■■□□□ 1.18
HMG20B-212ENST00000487894 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
HMG20B-212ENST00000487894 EIF5P55010 431 aaKnown RBP22.4■■□□□ 1.18
HMG20B-212ENST00000487894 NLGN2Q8NFZ4 835 aa22.4■■□□□ 1.18
HMG20B-212ENST00000487894 MRS2Q9HD23 443 aa22.4■■□□□ 1.18
HMG20B-212ENST00000487894 N4BP2Q86UW6 1770 aaPredicted RBP22.4■■□□□ 1.18
HMG20B-212ENST00000487894 A1BGP04217 495 aa22.39■■□□□ 1.17
HMG20B-212ENST00000487894 USPL1Q5W0Q7 1092 aa22.39■■□□□ 1.17
HMG20B-212ENST00000487894 NARFQ9UHQ1 456 aa22.39■■□□□ 1.17
HMG20B-212ENST00000487894 IL6STP40189 918 aaPredicted RBP22.38■■□□□ 1.17
HMG20B-212ENST00000487894 EIF4A1P60842 406 aaKnown RBP22.38■■□□□ 1.17
HMG20B-212ENST00000487894 FKBP8Q14318 412 aa22.38■■□□□ 1.17
HMG20B-212ENST00000487894 BRCA1P38398 1863 aaKnown RBP22.38■■□□□ 1.17
HMG20B-212ENST00000487894 GOLGB1Q14789 3259 aaKnown RBP22.38■■□□□ 1.17
HMG20B-212ENST00000487894 C10orf71Q711Q0 1435 aa22.38■■□□□ 1.17
HMG20B-212ENST00000487894 APAF1O14727 1248 aa22.37■■□□□ 1.17
HMG20B-212ENST00000487894 ZPR1O75312 459 aa22.37■■□□□ 1.17
HMG20B-212ENST00000487894 TSPYL4Q9UJ04 414 aa22.37■■□□□ 1.17
HMG20B-212ENST00000487894 CHD4Q14839 1912 aa22.36■■□□□ 1.17
HMG20B-212ENST00000487894 BABAM1Q9NWV8 329 aa22.36■■□□□ 1.17
HMG20B-212ENST00000487894 CD2APQ9Y5K6 639 aa22.36■■□□□ 1.17
HMG20B-212ENST00000487894 UTRNP46939 3433 aa22.35■■□□□ 1.17
HMG20B-212ENST00000487894 GIGYF1O75420 1035 aaPredicted RBP22.35■■□□□ 1.17
HMG20B-212ENST00000487894 PIP4K2AP48426 406 aaPredicted RBP22.35■■□□□ 1.17
HMG20B-212ENST00000487894 BCL2L12Q9HB09 334 aa22.35■■□□□ 1.17
HMG20B-212ENST00000487894 A0A087WZG4 1122 aa22.34■■□□□ 1.17
HMG20B-212ENST00000487894 DDR1Q08345 913 aa22.34■■□□□ 1.17
HMG20B-212ENST00000487894 ZNF330Q9Y3S2 320 aaPredicted RBP22.34■■□□□ 1.17
HMG20B-212ENST00000487894 PARP3Q9Y6F1 533 aa22.33■■□□□ 1.17
HMG20B-212ENST00000487894 NUP98P52948 1817 aa22.33■■□□□ 1.16
HMG20B-212ENST00000487894 NBPF26B4DH59 902 aa22.32■■□□□ 1.16
HMG20B-212ENST00000487894 NBPF10Q6P3W6 841 aaKnown RBP22.32■■□□□ 1.16
HMG20B-212ENST00000487894 NBPF15Q8N660 670 aa22.32■■□□□ 1.16
HMG20B-212ENST00000487894 ANKRD31Q8N7Z5 1873 aa22.31■■□□□ 1.16
HMG20B-212ENST00000487894 DLEC1Q9Y238 1755 aa22.31■■□□□ 1.16
HMG20B-212ENST00000487894 PXDNLA1KZ92 1463 aa22.31■■□□□ 1.16
HMG20B-212ENST00000487894 CHL1O00533 1208 aa22.31■■□□□ 1.16
HMG20B-212ENST00000487894 TM4SF1P30408 202 aa22.31■■□□□ 1.16
HMG20B-212ENST00000487894 TBC1D2BQ9UPU7 963 aa22.31■■□□□ 1.16
HMG20B-212ENST00000487894 DCAF8L1A6NGE4 600 aa22.3■■□□□ 1.16
HMG20B-212ENST00000487894 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
HMG20B-212ENST00000487894 NFIXQ14938 502 aa22.29■■□□□ 1.16
HMG20B-212ENST00000487894 CAMTA2O94983 1202 aa22.28■■□□□ 1.16
HMG20B-212ENST00000487894 DZIP3Q86Y13 1208 aaKnown RBP22.28■■□□□ 1.16
HMG20B-212ENST00000487894 LAS1LQ9Y4W2 734 aaKnown RBP22.28■■□□□ 1.16
HMG20B-212ENST00000487894 NPM2Q86SE8 214 aaKnown RBP22.27■■□□□ 1.16
HMG20B-212ENST00000487894 CFAP44Q96MT7 982 aa22.27■■□□□ 1.16
HMG20B-212ENST00000487894 ARFGEF1Q9Y6D6 1849 aa22.27■■□□□ 1.15
HMG20B-212ENST00000487894 ANKRD36CQ5JPF3 1778 aa22.25■■□□□ 1.15
HMG20B-212ENST00000487894 SENP3-EIF4A1A0A087X0R7 540 aa22.25■■□□□ 1.15
HMG20B-212ENST00000487894 ZNF853P0CG23 659 aa22.25■■□□□ 1.15
HMG20B-212ENST00000487894 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
HMG20B-212ENST00000487894 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
HMG20B-212ENST00000487894 COL11A2P13942 1736 aaPredicted RBP22.25■■□□□ 1.15
HMG20B-212ENST00000487894 ERBB4Q15303 1308 aa22.25■■□□□ 1.15
HMG20B-212ENST00000487894 YBX3P16989 372 aaKnown RBP eCLIP22.24■■□□□ 1.15
HMG20B-212ENST00000487894 GPR162Q16538 588 aa22.24■■□□□ 1.15
HMG20B-212ENST00000487894 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
HMG20B-212ENST00000487894 MBIPQ9NS73 344 aa22.24■■□□□ 1.15
HMG20B-212ENST00000487894 CALD1Q05682 793 aaKnown RBP22.23■■□□□ 1.15
HMG20B-212ENST00000487894 IFT57Q9NWB7 429 aa22.23■■□□□ 1.15
HMG20B-212ENST00000487894 CARMIL3Q8ND23 1372 aa22.23■■□□□ 1.15
HMG20B-212ENST00000487894 TGFB2P61812 414 aa22.22■■□□□ 1.15
HMG20B-212ENST00000487894 CCDC27Q2M243 656 aa22.22■■□□□ 1.15
HMG20B-212ENST00000487894 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
HMG20B-212ENST00000487894 SERPINB2P05120 415 aa22.21■■□□□ 1.15
HMG20B-212ENST00000487894 MYL6BP14649 208 aa22.21■■□□□ 1.15
HMG20B-212ENST00000487894 GNAI1P63096 354 aa22.21■■□□□ 1.15
HMG20B-212ENST00000487894 CACNA1SQ13698 1873 aa22.2■■□□□ 1.14
HMG20B-212ENST00000487894 EIF2S2P20042 333 aaKnown RBP22.2■■□□□ 1.14
HMG20B-212ENST00000487894 PDIA6Q15084 440 aa22.2■■□□□ 1.14
HMG20B-212ENST00000487894 NCBP3Q53F19 620 aaKnown RBP22.2■■□□□ 1.14
HMG20B-212ENST00000487894 LRP10Q7Z4F1 713 aa22.2■■□□□ 1.14
HMG20B-212ENST00000487894 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms