RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, human

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF3-215	ENST00000487620	KIAA2012	Q0VF49	1180 aa		11.81	□□□□□ -0.52
ZNF3-215	ENST00000487620	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.81	□□□□□ -0.52
ZNF3-215	ENST00000487620	CNPY2	Q9Y2B0	182 aa		11.81	□□□□□ -0.52
ZNF3-215	ENST00000487620	SOS1	Q07889	1333 aa	Predicted RBP	11.81	□□□□□ -0.52
ZNF3-215	ENST00000487620	SBNO1	A3KN83	1393 aa		11.81	□□□□□ -0.52
ZNF3-215	ENST00000487620	USP25	Q9UHP3	1055 aa		11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	KDR	P35968	1356 aa		11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	SASS6	Q6UVJ0	657 aa		11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	PPP1R42	Q7Z4L9	355 aa		11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	ZNF830	Q96NB3	372 aa	Predicted RBP	11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	PHAX	Q9H814	394 aa	Known RBP	11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	IGSF1	Q8N6C5	1336 aa		11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	RPAP1	Q9BWH6	1393 aa	Predicted RBP	11.8	□□□□□ -0.52
ZNF3-215	ENST00000487620	NGDN	Q8NEJ9	315 aa	Known RBP	11.79	□□□□□ -0.52
ZNF3-215	ENST00000487620	AOX1	Q06278	1338 aa		11.79	□□□□□ -0.52
ZNF3-215	ENST00000487620	AK2	P54819	239 aa		11.79	□□□□□ -0.52
ZNF3-215	ENST00000487620	CWC27	Q6UX04	472 aa	Known RBP	11.79	□□□□□ -0.52
ZNF3-215	ENST00000487620	SSH3	Q8TE77	659 aa		11.79	□□□□□ -0.52
ZNF3-215	ENST00000487620	SNX14	Q9Y5W7	946 aa		11.79	□□□□□ -0.52
ZNF3-215	ENST00000487620	RAD50	Q92878	1312 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	DYNC1I1	O14576	645 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	SRGAP3	O43295	1099 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	DTNB	O60941	627 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	CCDC183	Q5T5S1	534 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	HDGFL1	Q5TGJ6	251 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	RHPN1	Q8TCX5	695 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	LTV1	Q96GA3	475 aa	Predicted RBP	11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	SLC26A8	Q96RN1	970 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	TMEM2	Q9UHN6	1383 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	SGSM2	O43147	1006 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	FIBP	O43427	364 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	ZSCAN22	P10073	491 aa	Predicted RBP	11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	HCLS1	P14317	486 aa	Predicted RBP	11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	CPA1	P15085	419 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	PLCB2	Q00722	1185 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	NUTM2G	Q5VZR2	741 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	RASEF	Q8IZ41	740 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	FAM184A	Q8NB25	1140 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	IL17RE	Q8NFR9	667 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	PI4K2B	Q8TCG2	481 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	IL17RA	Q96F46	866 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	MAP7D2	Q96T17	732 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	SPG7	Q9UQ90	795 aa		11.78	□□□□□ -0.52
ZNF3-215	ENST00000487620	TTC21A	Q8NDW8	1320 aa		11.77	□□□□□ -0.52
ZNF3-215	ENST00000487620	STX6	O43752	255 aa		11.77	□□□□□ -0.52
ZNF3-215	ENST00000487620	EIF2S2	P20042	333 aa	Known RBP	11.77	□□□□□ -0.52
ZNF3-215	ENST00000487620	SYT1	P21579	422 aa		11.77	□□□□□ -0.52
ZNF3-215	ENST00000487620	CNTROB	Q8N137	903 aa		11.77	□□□□□ -0.52
ZNF3-215	ENST00000487620	ADAMTS13	Q76LX8	1427 aa		11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	HTATSF1	O43719	755 aa	Known RBP	11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	RAB11FIP3	O75154	756 aa		11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	ADCY5	O95622	1261 aa		11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	TAF7	Q15545	349 aa	Predicted RBP	11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	SMC3	Q9UQE7	1217 aa		11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	RGPD8	O14715	1765 aa	Predicted RBP	11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	TNR	Q92752	1358 aa		11.77	□□□□□ -0.53
ZNF3-215	ENST00000487620	PLEKHG5	O94827	1062 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	CAST	P20810	708 aa	Known RBP	11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	NLRP6	P59044	892 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	RUFY3	Q7L099	469 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	LSG1	Q9H089	658 aa	Known RBP	11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	LIMCH1	Q9UPQ0	1083 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	LRRC37A3	O60309	1634 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	EPB41L2	O43491	1005 aa	Known RBP	11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	UBE2H	P62256	183 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	UVSSA	Q2YD98	709 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	TMEM87A	Q8NBN3	555 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	TTC14	Q96N46	770 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	TTC12	Q9H892	705 aa	Predicted RBP	11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	MAP3K5	Q99683	1374 aa		11.76	□□□□□ -0.53
ZNF3-215	ENST00000487620	LTK	P29376	864 aa		11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	OS9	Q13438	667 aa	Predicted RBP	11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	KIF1BP	Q96EK5	621 aa		11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	DIP2B	Q9P265	1576 aa		11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	UBR1	Q8IWV7	1749 aa		11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	PXDNL	A1KZ92	1463 aa		11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	F13A1	P00488	732 aa		11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	USHBP1	Q8N6Y0	703 aa		11.75	□□□□□ -0.53
ZNF3-215	ENST00000487620	LETM1	O95202	739 aa	Predicted RBP	11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	LARGE1	O95461	756 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	POLA2	Q14181	598 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	CCDC83	Q8IWF9	413 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	ATP6V1D	Q9Y5K8	247 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	HOXC9	P31274	260 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	GIMAP6	Q6P9H5	292 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	PIBF1	Q8WXW3	757 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	JARID2	Q92833	1246 aa	Predicted RBP	11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	DIAPH3	Q9NSV4	1193 aa		11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	SETD1B	Q9UPS6	1966 aa	Known RBP	11.74	□□□□□ -0.53
ZNF3-215	ENST00000487620	GJB2	P29033	226 aa		11.73	□□□□□ -0.53
ZNF3-215	ENST00000487620	DNM1	Q05193	864 aa	Known RBP	11.73	□□□□□ -0.53
ZNF3-215	ENST00000487620	DDX54	Q8TDD1	881 aa	Known RBP	11.73	□□□□□ -0.53
ZNF3-215	ENST00000487620	JAKMIP1	Q96N16	626 aa	Known RBP	11.73	□□□□□ -0.53
ZNF3-215	ENST00000487620	PIK3C2A	O00443	1686 aa		11.73	□□□□□ -0.53
ZNF3-215	ENST00000487620	PI4KAP2	A4QPH2	592 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms