RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PNNQ9H307 717 aaKnown RBP15.19■□□□□ 0.02
SPEN-205ENST00000487496 C4AP0C0L4 1744 aa15.19■□□□□ 0.02
SPEN-205ENST00000487496 GRIN3BO60391 1043 aa15.18■□□□□ 0.02
SPEN-205ENST00000487496 ZPR1O75312 459 aa15.18■□□□□ 0.02
SPEN-205ENST00000487496 NFE2L2Q16236 605 aa15.18■□□□□ 0.02
SPEN-205ENST00000487496 USPL1Q5W0Q7 1092 aa15.18■□□□□ 0.02
SPEN-205ENST00000487496 NARFQ9UHQ1 456 aa15.18■□□□□ 0.02
SPEN-205ENST00000487496 PARP3Q9Y6F1 533 aa15.18■□□□□ 0.02
SPEN-205ENST00000487496 UTRNP46939 3433 aa15.18■□□□□ 0.02
SPEN-205ENST00000487496 COL15A1P39059 1388 aa15.17■□□□□ 0.02
SPEN-205ENST00000487496 TAF7Q15545 349 aaPredicted RBP15.17■□□□□ 0.02
SPEN-205ENST00000487496 MAPK8IP3Q9UPT6 1336 aa15.17■□□□□ 0.02
SPEN-205ENST00000487496 TM4SF1P30408 202 aa15.16■□□□□ 0.02
SPEN-205ENST00000487496 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
SPEN-205ENST00000487496 DDR1Q08345 913 aa15.16■□□□□ 0.02
SPEN-205ENST00000487496 TGFB2P61812 414 aa15.15■□□□□ 0.02
SPEN-205ENST00000487496 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
SPEN-205ENST00000487496 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
SPEN-205ENST00000487496 MIS18AQ9NYP9 233 aa15.15■□□□□ 0.02
SPEN-205ENST00000487496 USP16Q9Y5T5 823 aa15.15■□□□□ 0.02
SPEN-205ENST00000487496 C10orf71Q711Q0 1435 aa15.15■□□□□ 0.02
SPEN-205ENST00000487496 A0A087WZG4 1122 aa15.14■□□□□ 0.01
SPEN-205ENST00000487496 PRAMEF22A3QJZ6 481 aa15.14■□□□□ 0.01
SPEN-205ENST00000487496 A1BGP04217 495 aa15.14■□□□□ 0.01
SPEN-205ENST00000487496 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
SPEN-205ENST00000487496 WWC3Q9ULE0 1092 aa15.14■□□□□ 0.01
SPEN-205ENST00000487496 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
SPEN-205ENST00000487496 SNRPA1P09661 255 aaKnown RBP15.13■□□□□ 0.01
SPEN-205ENST00000487496 NFIXQ14938 502 aa15.13■□□□□ 0.01
SPEN-205ENST00000487496 THUMPD2Q9BTF0 503 aaKnown RBP15.13■□□□□ 0.01
SPEN-205ENST00000487496 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
SPEN-205ENST00000487496 PXDNLA1KZ92 1463 aa15.13■□□□□ 0.01
SPEN-205ENST00000487496 A0A0G2JLW4 131 aa15.12■□□□□ 0.01
SPEN-205ENST00000487496 PNISRQ8TF01 805 aaKnown RBP15.12■□□□□ 0.01
SPEN-205ENST00000487496 TBC1D2BQ9UPU7 963 aa15.12■□□□□ 0.01
SPEN-205ENST00000487496 CHD4Q14839 1912 aa15.11■□□□□ 0.01
SPEN-205ENST00000487496 KIF13BQ9NQT8 1826 aa15.11■□□□□ 0.01
SPEN-205ENST00000487496 DPEP1P16444 411 aa15.11■□□□□ 0.01
SPEN-205ENST00000487496 TMPOP42166 694 aaKnown RBP15.11■□□□□ 0.01
SPEN-205ENST00000487496 RIPK4P57078 832 aa15.11■□□□□ 0.01
SPEN-205ENST00000487496 ZNF784Q8NCA9 323 aaPredicted RBP15.11■□□□□ 0.01
SPEN-205ENST00000487496 DLG5Q8TDM6 1919 aa15.1■□□□□ 0.01
SPEN-205ENST00000487496 PIP4K2AP48426 406 aaPredicted RBP15.1■□□□□ 0.01
SPEN-205ENST00000487496 WDR43Q15061 677 aaKnown RBP eCLIP15.1■□□□□ 0.01
SPEN-205ENST00000487496 NPM2Q86SE8 214 aaKnown RBP15.1■□□□□ 0.01
SPEN-205ENST00000487496 SERPINB2P05120 415 aa15.09■□□□□ 0.01
SPEN-205ENST00000487496 KCNA3P22001 575 aa15.09■□□□□ 0.01
SPEN-205ENST00000487496 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
SPEN-205ENST00000487496 ADAMTS8Q9UP79 889 aa15.09■□□□□ 0.01
SPEN-205ENST00000487496 KIAA1551Q9HCM1 1747 aa15.09■□□□□ 0.01
SPEN-205ENST00000487496 GOLGB1Q14789 3259 aaKnown RBP15.08■□□□□ 0
SPEN-205ENST00000487496 NBPF26B4DH59 902 aa15.08■□□□□ 0
SPEN-205ENST00000487496 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
SPEN-205ENST00000487496 NBPF10Q6P3W6 841 aaKnown RBP15.08■□□□□ 0
SPEN-205ENST00000487496 BICDL1Q6ZP65 573 aa15.08■□□□□ 0
SPEN-205ENST00000487496 NBPF15Q8N660 670 aa15.08■□□□□ 0
SPEN-205ENST00000487496 RUNDC1Q96C34 613 aa15.08■□□□□ 0
SPEN-205ENST00000487496 BCS1LQ9Y276 419 aa15.08■□□□□ 0
SPEN-205ENST00000487496 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
SPEN-205ENST00000487496 GIGYF1O75420 1035 aaPredicted RBP15.07■□□□□ 0
SPEN-205ENST00000487496 CAMTA2O94983 1202 aa15.07■□□□□ 0
SPEN-205ENST00000487496 LMOD3Q0VAK6 560 aa15.07■□□□□ 0
SPEN-205ENST00000487496 TBC1D9BQ66K14 1250 aa15.07■□□□□ 0
SPEN-205ENST00000487496 DZIP3Q86Y13 1208 aaKnown RBP15.07■□□□□ 0
SPEN-205ENST00000487496 N4BP2Q86UW6 1770 aaPredicted RBP15.06■□□□□ 0
SPEN-205ENST00000487496 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
SPEN-205ENST00000487496 CHRNA5P30532 468 aa15.06■□□□□ 0
SPEN-205ENST00000487496 NEUROD2Q15784 382 aa15.06■□□□□ 0
SPEN-205ENST00000487496 PIM2Q9P1W9 311 aa15.06■□□□□ 0
SPEN-205ENST00000487496 TSPYL4Q9UJ04 414 aa15.05■□□□□ -0
SPEN-205ENST00000487496 KDM3BQ7LBC6 1761 aa15.04■□□□□ -0
SPEN-205ENST00000487496 SETDB2Q96T68 719 aa15.04■□□□□ -0
SPEN-205ENST00000487496 BABAM1Q9NWV8 329 aa15.04■□□□□ -0
SPEN-205ENST00000487496 TRIM35Q9UPQ4 493 aa15.04■□□□□ -0
SPEN-205ENST00000487496 DALRD3Q5D0E6 543 aaKnown RBP15.03■□□□□ -0
SPEN-205ENST00000487496 CLEC4GQ6UXB4 293 aa15.03■□□□□ -0
SPEN-205ENST00000487496 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
SPEN-205ENST00000487496 SCN7AQ01118 1682 aa15.03■□□□□ -0
SPEN-205ENST00000487496 CARMIL3Q8ND23 1372 aa15.02■□□□□ -0
SPEN-205ENST00000487496 AFDNP55196 1824 aaKnown RBP15.02■□□□□ -0
SPEN-205ENST00000487496 PRR5LQ6MZQ0 368 aa15.02■□□□□ -0
SPEN-205ENST00000487496 ARHGAP27Q6ZUM4 889 aa15.02■□□□□ -0
SPEN-205ENST00000487496 RGL2O15211 777 aa15.01□□□□□ -0.01
SPEN-205ENST00000487496 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
SPEN-205ENST00000487496 BRCA1P38398 1863 aaKnown RBP15.01□□□□□ -0.01
SPEN-205ENST00000487496 H0YIN7 160 aa15□□□□□ -0.01
SPEN-205ENST00000487496 CHL1O00533 1208 aa15□□□□□ -0.01
SPEN-205ENST00000487496 CCDC184Q52MB2 194 aa15□□□□□ -0.01
SPEN-205ENST00000487496 C2CD5Q86YS7 1000 aa15□□□□□ -0.01
SPEN-205ENST00000487496 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
SPEN-205ENST00000487496 NGEFQ8N5V2 710 aa15□□□□□ -0.01
SPEN-205ENST00000487496 BRIP1Q9BX63 1249 aa15□□□□□ -0.01
SPEN-205ENST00000487496 ADCY9O60503 1353 aa14.99□□□□□ -0.01
SPEN-205ENST00000487496 LAMB4A4D0S4 1761 aa14.99□□□□□ -0.01
SPEN-205ENST00000487496 MYL6BP14649 208 aa14.99□□□□□ -0.01
SPEN-205ENST00000487496 PDE6BP35913 854 aa14.99□□□□□ -0.01
SPEN-205ENST00000487496 HLFQ16534 295 aa14.99□□□□□ -0.01
SPEN-205ENST00000487496 CNBD1Q8NA66 436 aa14.99□□□□□ -0.01
SPEN-205ENST00000487496 ATP10DQ9P241 1426 aa14.99□□□□□ -0.01
SPEN-205ENST00000487496 BCORQ6W2J9 1755 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms