RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 TTC5Q8N0Z6 440 aa29.93■■■□□ 2.38
SRM-205ENST00000487300 ZNF496Q96IT1 587 aaPredicted RBP29.93■■■□□ 2.38
SRM-205ENST00000487300 KDM3BQ7LBC6 1761 aa29.92■■■□□ 2.38
SRM-205ENST00000487300 FKBP8Q14318 412 aa29.92■■■□□ 2.38
SRM-205ENST00000487300 DLEC1Q9Y238 1755 aa29.92■■■□□ 2.38
SRM-205ENST00000487300 LAMB4A4D0S4 1761 aa29.91■■■□□ 2.38
SRM-205ENST00000487300 TGFB2P61812 414 aa29.89■■■□□ 2.38
SRM-205ENST00000487300 DDR1Q08345 913 aa29.89■■■□□ 2.38
SRM-205ENST00000487300 PARP3Q9Y6F1 533 aa29.89■■■□□ 2.38
SRM-205ENST00000487300 NARFQ9UHQ1 456 aa29.88■■■□□ 2.37
SRM-205ENST00000487300 HTATSF1O43719 755 aaKnown RBP29.87■■■□□ 2.37
SRM-205ENST00000487300 TM4SF1P30408 202 aa29.87■■■□□ 2.37
SRM-205ENST00000487300 ADCY9O60503 1353 aa29.86■■■□□ 2.37
SRM-205ENST00000487300 STARD3NLO95772 234 aa29.85■■■□□ 2.37
SRM-205ENST00000487300 EIF5P55010 431 aaKnown RBP29.85■■■□□ 2.37
SRM-205ENST00000487300 USPL1Q5W0Q7 1092 aa29.85■■■□□ 2.37
SRM-205ENST00000487300 FMNL2Q96PY5 1086 aa29.85■■■□□ 2.37
SRM-205ENST00000487300 PLEKHF1Q96S99 279 aa29.85■■■□□ 2.37
SRM-205ENST00000487300 TEX13AQ9BXU3 409 aaPredicted RBP29.85■■■□□ 2.37
SRM-205ENST00000487300 BTBD11A6QL63 1104 aa29.84■■■□□ 2.37
SRM-205ENST00000487300 POLRMTO00411 1230 aaKnown RBP29.84■■■□□ 2.37
SRM-205ENST00000487300 ZPR1O75312 459 aa29.84■■■□□ 2.37
SRM-205ENST00000487300 BCL2L12Q9HB09 334 aa29.84■■■□□ 2.37
SRM-205ENST00000487300 KCNQ3O43525 872 aa29.83■■■□□ 2.37
SRM-205ENST00000487300 MCM10Q7L590 875 aa29.83■■■□□ 2.37
SRM-205ENST00000487300 RALBP1Q15311 655 aa29.82■■■□□ 2.36
SRM-205ENST00000487300 RTF1Q92541 710 aaKnown RBP29.82■■■□□ 2.36
SRM-205ENST00000487300 ANKRD31Q8N7Z5 1873 aa29.82■■■□□ 2.36
SRM-205ENST00000487300 CANXP27824 592 aaKnown RBP29.8■■■□□ 2.36
SRM-205ENST00000487300 A0A0G2JLW4 131 aa29.79■■■□□ 2.36
SRM-205ENST00000487300 KCNA3P22001 575 aa29.79■■■□□ 2.36
SRM-205ENST00000487300 DCTN1Q14203 1278 aa29.79■■■□□ 2.36
SRM-205ENST00000487300 WWC3Q9ULE0 1092 aa29.79■■■□□ 2.36
SRM-205ENST00000487300 DPEP1P16444 411 aa29.78■■■□□ 2.36
SRM-205ENST00000487300 IL6STP40189 918 aaPredicted RBP29.78■■■□□ 2.36
SRM-205ENST00000487300 NFIXQ14938 502 aa29.78■■■□□ 2.36
SRM-205ENST00000487300 DDX10Q13206 875 aaKnown RBP29.76■■■□□ 2.35
SRM-205ENST00000487300 ATP10DQ9P241 1426 aa29.76■■■□□ 2.35
SRM-205ENST00000487300 A0A087WZG4 1122 aa29.75■■■□□ 2.35
SRM-205ENST00000487300 COL11A2P13942 1736 aaPredicted RBP29.74■■■□□ 2.35
SRM-205ENST00000487300 NFE2L2Q16236 605 aa29.73■■■□□ 2.35
SRM-205ENST00000487300 SBF1O95248 1867 aa29.73■■■□□ 2.35
SRM-205ENST00000487300 MYBBP1AQ9BQG0 1328 aaKnown RBP29.72■■■□□ 2.35
SRM-205ENST00000487300 A1BGP04217 495 aa29.72■■■□□ 2.35
SRM-205ENST00000487300 NEFMP07197 916 aa29.72■■■□□ 2.35
SRM-205ENST00000487300 TAF7Q15545 349 aaPredicted RBP29.72■■■□□ 2.35
SRM-205ENST00000487300 USP16Q9Y5T5 823 aa29.72■■■□□ 2.35
SRM-205ENST00000487300 PRAMEF22A3QJZ6 481 aa29.71■■■□□ 2.35
SRM-205ENST00000487300 SNRPA1P09661 255 aaKnown RBP29.7■■■□□ 2.35
SRM-205ENST00000487300 PNNQ9H307 717 aaKnown RBP29.7■■■□□ 2.35
SRM-205ENST00000487300 BCS1LQ9Y276 419 aa29.7■■■□□ 2.35
SRM-205ENST00000487300 CARMIL3Q8ND23 1372 aa29.69■■■□□ 2.34
SRM-205ENST00000487300 SERPINB2P05120 415 aa29.68■■■□□ 2.34
SRM-205ENST00000487300 PIM2Q9P1W9 311 aa29.68■■■□□ 2.34
SRM-205ENST00000487300 ARFGEF2Q9Y6D5 1785 aa29.67■■■□□ 2.34
SRM-205ENST00000487300 CAMTA2O94983 1202 aa29.67■■■□□ 2.34
SRM-205ENST00000487300 MAPK8IP3Q9UPT6 1336 aa29.67■■■□□ 2.34
SRM-205ENST00000487300 TBC1D9BQ66K14 1250 aa29.66■■■□□ 2.34
SRM-205ENST00000487300 TBC1D2BQ9UPU7 963 aa29.66■■■□□ 2.34
SRM-205ENST00000487300 CHRNA5P30532 468 aa29.65■■■□□ 2.34
SRM-205ENST00000487300 PNISRQ8TF01 805 aaKnown RBP29.64■■■□□ 2.34
SRM-205ENST00000487300 NUP98P52948 1817 aa29.64■■■□□ 2.33
SRM-205ENST00000487300 ZNF330Q9Y3S2 320 aaPredicted RBP29.63■■■□□ 2.33
SRM-205ENST00000487300 CACNA1SQ13698 1873 aa29.62■■■□□ 2.33
SRM-205ENST00000487300 NBPF26B4DH59 902 aa29.62■■■□□ 2.33
SRM-205ENST00000487300 GIGYF1O75420 1035 aaPredicted RBP29.62■■■□□ 2.33
SRM-205ENST00000487300 DALRD3Q5D0E6 543 aaKnown RBP29.62■■■□□ 2.33
SRM-205ENST00000487300 NBPF10Q6P3W6 841 aaKnown RBP29.62■■■□□ 2.33
SRM-205ENST00000487300 NBPF15Q8N660 670 aa29.62■■■□□ 2.33
SRM-205ENST00000487300 THUMPD2Q9BTF0 503 aaKnown RBP29.62■■■□□ 2.33
SRM-205ENST00000487300 MIS18AQ9NYP9 233 aa29.62■■■□□ 2.33
SRM-205ENST00000487300 PIP4K2AP48426 406 aaPredicted RBP29.61■■■□□ 2.33
SRM-205ENST00000487300 C1QTNF8P60827 252 aa29.61■■■□□ 2.33
SRM-205ENST00000487300 DZIP3Q86Y13 1208 aaKnown RBP29.61■■■□□ 2.33
SRM-205ENST00000487300 RGL2O15211 777 aa29.6■■■□□ 2.33
SRM-205ENST00000487300 CCDC88AQ3V6T2 1871 aa29.59■■■□□ 2.33
SRM-205ENST00000487300 BICDL1Q6ZP65 573 aa29.59■■■□□ 2.33
SRM-205ENST00000487300 EIF4A1P60842 406 aaKnown RBP29.58■■■□□ 2.33
SRM-205ENST00000487300 PRKRIP1Q9H875 184 aaPredicted RBP29.58■■■□□ 2.33
SRM-205ENST00000487300 FER1L6Q2WGJ9 1857 aa29.57■■■□□ 2.32
SRM-205ENST00000487300 PRR5LQ6MZQ0 368 aa29.57■■■□□ 2.32
SRM-205ENST00000487300 CLEC4GQ6UXB4 293 aa29.57■■■□□ 2.32
SRM-205ENST00000487300 ARHGAP27Q6ZUM4 889 aa29.57■■■□□ 2.32
SRM-205ENST00000487300 NPM2Q86SE8 214 aaKnown RBP29.57■■■□□ 2.32
SRM-205ENST00000487300 TIAM2Q8IVF5 1701 aa29.55■■■□□ 2.32
SRM-205ENST00000487300 TMPOP42166 694 aaKnown RBP29.55■■■□□ 2.32
SRM-205ENST00000487300 GPBP1L1Q9HC44 474 aaPredicted RBP29.55■■■□□ 2.32
SRM-205ENST00000487300 BRIP1Q9BX63 1249 aa29.54■■■□□ 2.32
SRM-205ENST00000487300 RIPK4P57078 832 aa29.53■■■□□ 2.32
SRM-205ENST00000487300 SETDB2Q96T68 719 aa29.53■■■□□ 2.32
SRM-205ENST00000487300 DICER1Q9UPY3 1922 aaKnown RBP29.53■■■□□ 2.32
SRM-205ENST00000487300 CEP350Q5VT06 3117 aa29.53■■■□□ 2.32
SRM-205ENST00000487300 C2CD5Q86YS7 1000 aa29.52■■■□□ 2.32
SRM-205ENST00000487300 BABAM1Q9NWV8 329 aa29.52■■■□□ 2.32
SRM-205ENST00000487300 PDZRN3Q9UPQ7 1066 aa29.52■■■□□ 2.32
SRM-205ENST00000487300 SLX4Q8IY92 1834 aa29.51■■■□□ 2.31
SRM-205ENST00000487300 ZNF652Q9Y2D9 606 aa29.51■■■□□ 2.31
SRM-205ENST00000487300 TNRC6CQ9HCJ0 1690 aaKnown RBP29.5■■■□□ 2.31
SRM-205ENST00000487300 H0YIN7 160 aa29.5■■■□□ 2.31
SRM-205ENST00000487300 LMOD3Q0VAK6 560 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms