RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 CANXP27824 592 aaKnown RBP32.88■■■□□ 2.85
LIME1-206ENST00000487026 TM4SF1P30408 202 aa32.88■■■□□ 2.85
LIME1-206ENST00000487026 ZNF496Q96IT1 587 aaPredicted RBP32.88■■■□□ 2.85
LIME1-206ENST00000487026 ZNF790Q6PG37 636 aa32.87■■■□□ 2.85
LIME1-206ENST00000487026 COL15A1P39059 1388 aa32.86■■■□□ 2.85
LIME1-206ENST00000487026 NARFQ9UHQ1 456 aa32.86■■■□□ 2.85
LIME1-206ENST00000487026 POLRMTO00411 1230 aaKnown RBP32.85■■■□□ 2.85
LIME1-206ENST00000487026 KCNA3P22001 575 aa32.85■■■□□ 2.85
LIME1-206ENST00000487026 ZNF526Q8TF50 670 aaPredicted RBP32.85■■■□□ 2.85
LIME1-206ENST00000487026 UBR2Q8IWV8 1755 aa32.85■■■□□ 2.85
LIME1-206ENST00000487026 FCHSD2O94868 740 aa32.83■■■□□ 2.85
LIME1-206ENST00000487026 STARD3NLO95772 234 aa32.83■■■□□ 2.85
LIME1-206ENST00000487026 ADCY9O60503 1353 aa32.83■■■□□ 2.85
LIME1-206ENST00000487026 KCNQ3O43525 872 aa32.82■■■□□ 2.84
LIME1-206ENST00000487026 CEMIPQ8WUJ3 1361 aa32.82■■■□□ 2.84
LIME1-206ENST00000487026 ARHGAP27Q6ZUM4 889 aa32.81■■■□□ 2.84
LIME1-206ENST00000487026 BCL2L12Q9HB09 334 aa32.81■■■□□ 2.84
LIME1-206ENST00000487026 HEG1Q9ULI3 1381 aa32.81■■■□□ 2.84
LIME1-206ENST00000487026 SENP3-EIF4A1A0A087X0R7 540 aa32.8■■■□□ 2.84
LIME1-206ENST00000487026 BTBD11A6QL63 1104 aa32.8■■■□□ 2.84
LIME1-206ENST00000487026 NFIXQ14938 502 aa32.8■■■□□ 2.84
LIME1-206ENST00000487026 GPBP1L1Q9HC44 474 aaPredicted RBP32.8■■■□□ 2.84
LIME1-206ENST00000487026 SIPA1L3O60292 1781 aaPredicted RBP32.8■■■□□ 2.84
LIME1-206ENST00000487026 CHRNA5P30532 468 aa32.79■■■□□ 2.84
LIME1-206ENST00000487026 MCM10Q7L590 875 aa32.78■■■□□ 2.84
LIME1-206ENST00000487026 FMNL2Q96PY5 1086 aa32.78■■■□□ 2.84
LIME1-206ENST00000487026 PIM2Q9P1W9 311 aa32.78■■■□□ 2.84
LIME1-206ENST00000487026 EIF5P55010 431 aaKnown RBP32.77■■■□□ 2.84
LIME1-206ENST00000487026 TEX13AQ9BXU3 409 aaPredicted RBP32.77■■■□□ 2.84
LIME1-206ENST00000487026 ZNF330Q9Y3S2 320 aaPredicted RBP32.76■■■□□ 2.83
LIME1-206ENST00000487026 DCTN1Q14203 1278 aa32.75■■■□□ 2.83
LIME1-206ENST00000487026 RTF1Q92541 710 aaKnown RBP32.75■■■□□ 2.83
LIME1-206ENST00000487026 A1BGP04217 495 aa32.74■■■□□ 2.83
LIME1-206ENST00000487026 BRCA1P38398 1863 aaKnown RBP32.74■■■□□ 2.83
LIME1-206ENST00000487026 SERPINB2P05120 415 aa32.73■■■□□ 2.83
LIME1-206ENST00000487026 DALRD3Q5D0E6 543 aaKnown RBP32.73■■■□□ 2.83
LIME1-206ENST00000487026 BICDL1Q6ZP65 573 aa32.73■■■□□ 2.83
LIME1-206ENST00000487026 A0A087WZG4 1122 aa32.72■■■□□ 2.83
LIME1-206ENST00000487026 TBC1D2BQ9UPU7 963 aa32.72■■■□□ 2.83
LIME1-206ENST00000487026 USP16Q9Y5T5 823 aa32.69■■■□□ 2.82
LIME1-206ENST00000487026 AFDNP55196 1824 aaKnown RBP32.69■■■□□ 2.82
LIME1-206ENST00000487026 PRAMEF22A3QJZ6 481 aa32.68■■■□□ 2.82
LIME1-206ENST00000487026 IL6STP40189 918 aaPredicted RBP32.68■■■□□ 2.82
LIME1-206ENST00000487026 TBC1D9BQ66K14 1250 aa32.67■■■□□ 2.82
LIME1-206ENST00000487026 PIP4K2AP48426 406 aaPredicted RBP32.66■■■□□ 2.82
LIME1-206ENST00000487026 HTATSF1O43719 755 aaKnown RBP32.64■■■□□ 2.82
LIME1-206ENST00000487026 ARFGEF1Q9Y6D6 1849 aa32.64■■■□□ 2.82
LIME1-206ENST00000487026 NRXN2Q9P2S2 1712 aa32.63■■■□□ 2.81
LIME1-206ENST00000487026 C9orf131Q5VYM1 1079 aa32.63■■■□□ 2.81
LIME1-206ENST00000487026 NPM2Q86SE8 214 aaKnown RBP32.63■■■□□ 2.81
LIME1-206ENST00000487026 MIS18AQ9NYP9 233 aa32.63■■■□□ 2.81
LIME1-206ENST00000487026 CARMIL3Q8ND23 1372 aa32.62■■■□□ 2.81
LIME1-206ENST00000487026 SNRPA1P09661 255 aaKnown RBP32.61■■■□□ 2.81
LIME1-206ENST00000487026 C2CD5Q86YS7 1000 aa32.61■■■□□ 2.81
LIME1-206ENST00000487026 CCDC24Q8N4L8 307 aa32.61■■■□□ 2.81
LIME1-206ENST00000487026 TAF7Q15545 349 aaPredicted RBP32.6■■■□□ 2.81
LIME1-206ENST00000487026 KIF3CO14782 793 aa32.59■■■□□ 2.81
LIME1-206ENST00000487026 CAMTA2O94983 1202 aa32.59■■■□□ 2.81
LIME1-206ENST00000487026 NEFMP07197 916 aa32.59■■■□□ 2.81
LIME1-206ENST00000487026 PLEKHF1Q96S99 279 aa32.59■■■□□ 2.81
LIME1-206ENST00000487026 DZIP3Q86Y13 1208 aaKnown RBP32.58■■■□□ 2.81
LIME1-206ENST00000487026 H0YIN7 160 aa32.56■■■□□ 2.8
LIME1-206ENST00000487026 PRR5LQ6MZQ0 368 aa32.55■■■□□ 2.8
LIME1-206ENST00000487026 TTLL6Q8N841 843 aa32.55■■■□□ 2.8
LIME1-206ENST00000487026 RNF181Q9P0P0 153 aa32.55■■■□□ 2.8
LIME1-206ENST00000487026 SCN7AQ01118 1682 aa32.55■■■□□ 2.8
LIME1-206ENST00000487026 SETDB2Q96T68 719 aa32.54■■■□□ 2.8
LIME1-206ENST00000487026 NBPF26B4DH59 902 aa32.53■■■□□ 2.8
LIME1-206ENST00000487026 DDX10Q13206 875 aaKnown RBP32.53■■■□□ 2.8
LIME1-206ENST00000487026 NFE2L2Q16236 605 aa32.53■■■□□ 2.8
LIME1-206ENST00000487026 NBPF10Q6P3W6 841 aaKnown RBP32.53■■■□□ 2.8
LIME1-206ENST00000487026 NBPF15Q8N660 670 aa32.53■■■□□ 2.8
LIME1-206ENST00000487026 THUMPD2Q9BTF0 503 aaKnown RBP32.53■■■□□ 2.8
LIME1-206ENST00000487026 RASSF7Q02833 373 aa32.52■■■□□ 2.8
LIME1-206ENST00000487026 NMRK2Q9NPI5 230 aa32.52■■■□□ 2.8
LIME1-206ENST00000487026 DLG5Q8TDM6 1919 aa32.51■■■□□ 2.8
LIME1-206ENST00000487026 BRIP1Q9BX63 1249 aa32.51■■■□□ 2.79
LIME1-206ENST00000487026 ZNF622Q969S3 477 aaKnown RBP eCLIP32.5■■■□□ 2.79
LIME1-206ENST00000487026 PDE6BP35913 854 aa32.49■■■□□ 2.79
LIME1-206ENST00000487026 RALBP1Q15311 655 aa32.49■■■□□ 2.79
LIME1-206ENST00000487026 NPHP1O15259 732 aa32.48■■■□□ 2.79
LIME1-206ENST00000487026 CNBD1Q8NA66 436 aa32.48■■■□□ 2.79
LIME1-206ENST00000487026 CEP350Q5VT06 3117 aa32.48■■■□□ 2.79
LIME1-206ENST00000487026 ANKRD31Q8N7Z5 1873 aa32.48■■■□□ 2.79
LIME1-206ENST00000487026 MAPK8IP3Q9UPT6 1336 aa32.48■■■□□ 2.79
LIME1-206ENST00000487026 DLEC1Q9Y238 1755 aa32.47■■■□□ 2.79
LIME1-206ENST00000487026 PNNQ9H307 717 aaKnown RBP32.47■■■□□ 2.79
LIME1-206ENST00000487026 ZNF219Q9P2Y4 722 aaPredicted RBP32.47■■■□□ 2.79
LIME1-206ENST00000487026 HSPA6P17066 643 aa32.46■■■□□ 2.79
LIME1-206ENST00000487026 PNISRQ8TF01 805 aaKnown RBP32.46■■■□□ 2.79
LIME1-206ENST00000487026 SBF1O95248 1867 aa32.46■■■□□ 2.79
LIME1-206ENST00000487026 PRELPP51888 382 aa32.45■■■□□ 2.79
LIME1-206ENST00000487026 CLEC4GQ6UXB4 293 aa32.45■■■□□ 2.79
LIME1-206ENST00000487026 BCORQ6W2J9 1755 aa32.45■■■□□ 2.78
LIME1-206ENST00000487026 EIF4A1P60842 406 aaKnown RBP32.43■■■□□ 2.78
LIME1-206ENST00000487026 ST5P78524 1137 aa32.43■■■□□ 2.78
LIME1-206ENST00000487026 PDZRN3Q9UPQ7 1066 aa32.43■■■□□ 2.78
LIME1-206ENST00000487026 NBPF5PQ86XG9 351 aaPredicted RBP32.42■■■□□ 2.78
LIME1-206ENST00000487026 NGEFQ8N5V2 710 aa32.42■■■□□ 2.78
LIME1-206ENST00000487026 ZNF652Q9Y2D9 606 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms