RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 GBP4Q96PP9 640 aa20.78■□□□□ 0.92
FDPS-212ENST00000487002 ALDH1L1O75891 902 aa20.78■□□□□ 0.92
FDPS-212ENST00000487002 PPP1R42Q7Z4L9 355 aa20.78■□□□□ 0.92
FDPS-212ENST00000487002 ST18O60284 1047 aa20.77■□□□□ 0.92
FDPS-212ENST00000487002 HDAC5Q9UQL6 1122 aa20.77■□□□□ 0.92
FDPS-212ENST00000487002 PKD1L3Q7Z443 1732 aa20.77■□□□□ 0.92
FDPS-212ENST00000487002 HSP90AB4PQ58FF6 505 aa20.77■□□□□ 0.91
FDPS-212ENST00000487002 TNS3Q68CZ2 1445 aa20.77■□□□□ 0.91
FDPS-212ENST00000487002 TNPO1Q92973 898 aaKnown RBP20.77■□□□□ 0.91
FDPS-212ENST00000487002 EPB41L2O43491 1005 aaKnown RBP20.76■□□□□ 0.91
FDPS-212ENST00000487002 MTX1Q13505 466 aa20.76■□□□□ 0.91
FDPS-212ENST00000487002 ESYT1Q9BSJ8 1104 aa20.76■□□□□ 0.91
FDPS-212ENST00000487002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.76■□□□□ 0.911e-8■□□□□ 9.7
FDPS-212ENST00000487002 MRC1P22897 1456 aa20.76■□□□□ 0.91
FDPS-212ENST00000487002 KIF1BPQ96EK5 621 aa20.75■□□□□ 0.91
FDPS-212ENST00000487002 HYPKQ9NX55 129 aa20.75■□□□□ 0.91
FDPS-212ENST00000487002 C5P01031 1676 aa20.75■□□□□ 0.91
FDPS-212ENST00000487002 NBPF7P0C2Y1 421 aaPredicted RBP20.75■□□□□ 0.91
FDPS-212ENST00000487002 L1TD1Q5T7N2 865 aaKnown RBP20.75■□□□□ 0.91
FDPS-212ENST00000487002 RAPGEF4Q8WZA2 1011 aa20.75■□□□□ 0.91
FDPS-212ENST00000487002 NPHP3Q7Z494 1330 aa20.75■□□□□ 0.91
FDPS-212ENST00000487002 SRGAP3O43295 1099 aa20.74■□□□□ 0.91
FDPS-212ENST00000487002 TRAK2O60296 914 aa20.74■□□□□ 0.91
FDPS-212ENST00000487002 KSR2Q6VAB6 950 aa20.74■□□□□ 0.91
FDPS-212ENST00000487002 SURF6O75683 361 aaKnown RBP20.73■□□□□ 0.91
FDPS-212ENST00000487002 CLEC17AQ6ZS10 378 aa20.73■□□□□ 0.91
FDPS-212ENST00000487002 RHPN1Q8TCX5 695 aa20.73■□□□□ 0.91
FDPS-212ENST00000487002 PARP4Q9UKK3 1724 aaKnown RBP20.73■□□□□ 0.91
FDPS-212ENST00000487002 KDM6AO15550 1401 aaPredicted RBP20.73■□□□□ 0.91
FDPS-212ENST00000487002 CHMLP26374 656 aa20.73■□□□□ 0.91
FDPS-212ENST00000487002 IL27Q8NEV9 243 aa20.73■□□□□ 0.91
FDPS-212ENST00000487002 MCCP23508 829 aa20.72■□□□□ 0.91
FDPS-212ENST00000487002 ANAPC15P60006 121 aa20.72■□□□□ 0.91
FDPS-212ENST00000487002 TSHZ3Q63HK5 1081 aa20.72■□□□□ 0.91
FDPS-212ENST00000487002 CADPS2Q86UW7 1296 aa20.72■□□□□ 0.91
FDPS-212ENST00000487002 IL17RAQ96F46 866 aa20.72■□□□□ 0.91
FDPS-212ENST00000487002 TATP17735 454 aaPredicted RBP20.71■□□□□ 0.91
FDPS-212ENST00000487002 ZC3H6P61129 1189 aaKnown RBP20.71■□□□□ 0.91
FDPS-212ENST00000487002 SPG7Q9UQ90 795 aa20.71■□□□□ 0.91
FDPS-212ENST00000487002 MAP3K2Q9Y2U5 619 aa20.71■□□□□ 0.91
FDPS-212ENST00000487002 MEGF6O75095 1541 aa20.71■□□□□ 0.91
FDPS-212ENST00000487002 USP42Q9H9J4 1324 aaKnown RBP20.71■□□□□ 0.91
FDPS-212ENST00000487002 TRIM6-TRIM34B2RNG4 842 aa20.71■□□□□ 0.91
FDPS-212ENST00000487002 DDX58O95786 925 aaKnown RBP20.71■□□□□ 0.91
FDPS-212ENST00000487002 DDX21Q9NR30 783 aaKnown RBP eCLIP20.71■□□□□ 0.91
FDPS-212ENST00000487002 CPDO75976 1380 aa20.7■□□□□ 0.9
FDPS-212ENST00000487002 PLEKHG5O94827 1062 aa20.7■□□□□ 0.9
FDPS-212ENST00000487002 ANXA1P04083 346 aa20.7■□□□□ 0.9
FDPS-212ENST00000487002 SLC52A2Q9HAB3 445 aa20.7■□□□□ 0.9
FDPS-212ENST00000487002 CWC22Q9HCG8 908 aaKnown RBP20.7■□□□□ 0.9
FDPS-212ENST00000487002 SKOR2Q2VWA4 1001 aaPredicted RBP20.7■□□□□ 0.9
FDPS-212ENST00000487002 IL1RAPL2Q9NP60 686 aa20.7■□□□□ 0.9
FDPS-212ENST00000487002 UTYO14607 1347 aa20.69■□□□□ 0.9
FDPS-212ENST00000487002 PHKG2P15735 406 aa20.69■□□□□ 0.9
FDPS-212ENST00000487002 MCM2P49736 904 aa20.69■□□□□ 0.9
FDPS-212ENST00000487002 NUCB2P80303 420 aa20.69■□□□□ 0.9
FDPS-212ENST00000487002 PROSER3Q2NL68 480 aa20.69■□□□□ 0.9
FDPS-212ENST00000487002 RILPL2Q969X0 211 aa20.69■□□□□ 0.9
FDPS-212ENST00000487002 NLRP2Q9NX02 1062 aa20.69■□□□□ 0.9
FDPS-212ENST00000487002 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
FDPS-212ENST00000487002 LINS1Q8NG48 757 aa20.68■□□□□ 0.9
FDPS-212ENST00000487002 PI4K2BQ8TCG2 481 aa20.68■□□□□ 0.9
FDPS-212ENST00000487002 XIRP1Q702N8 1843 aaKnown RBP20.68■□□□□ 0.9
FDPS-212ENST00000487002 TTC41PQ6P2S7 1318 aa20.68■□□□□ 0.9
FDPS-212ENST00000487002 FOXD4L1Q9NU39 408 aa20.68■□□□□ 0.9
FDPS-212ENST00000487002 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
FDPS-212ENST00000487002 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
FDPS-212ENST00000487002 FSD2A1L4K1 749 aa20.67■□□□□ 0.9
FDPS-212ENST00000487002 IFNL2Q8IZJ0 200 aa20.67■□□□□ 0.9
FDPS-212ENST00000487002 ISY1Q9ULR0 285 aaKnown RBP20.67■□□□□ 0.9
FDPS-212ENST00000487002 ERC1Q8IUD2 1116 aa20.66■□□□□ 0.9
FDPS-212ENST00000487002 SPATA31A3Q5VYP0 1347 aa20.66■□□□□ 0.9
FDPS-212ENST00000487002 NUTM1Q86Y26 1132 aa20.66■□□□□ 0.9
FDPS-212ENST00000487002 BRPF3Q9ULD4 1205 aa20.66■□□□□ 0.9
FDPS-212ENST00000487002 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
FDPS-212ENST00000487002 PDIA6Q15084 440 aa20.65■□□□□ 0.9
FDPS-212ENST00000487002 UNC5CLQ8IV45 518 aa20.65■□□□□ 0.9
FDPS-212ENST00000487002 PRAMEF22A3QJZ6 481 aa20.65■□□□□ 0.9
FDPS-212ENST00000487002 GOLGA6L3A6NEY3 463 aa20.65■□□□□ 0.9
FDPS-212ENST00000487002 CYP2E1P05181 493 aaPredicted RBP20.65■□□□□ 0.9
FDPS-212ENST00000487002 CNTROBQ8N137 903 aa20.65■□□□□ 0.9
FDPS-212ENST00000487002 ANO2Q9NQ90 1003 aa20.65■□□□□ 0.9
FDPS-212ENST00000487002 GRM8O00222 908 aa20.64■□□□□ 0.89
FDPS-212ENST00000487002 SSFA2P28290 1259 aa20.64■□□□□ 0.89
FDPS-212ENST00000487002 DCAF5Q96JK2 942 aa20.64■□□□□ 0.89
FDPS-212ENST00000487002 CSB-PGBD3P0DP91 1061 aa20.63■□□□□ 0.89
FDPS-212ENST00000487002 GLRX3O76003 335 aaKnown RBP20.62■□□□□ 0.89
FDPS-212ENST00000487002 OS9Q13438 667 aaPredicted RBP20.62■□□□□ 0.89
FDPS-212ENST00000487002 LARP1Q6PKG0 1096 aaKnown RBP20.62■□□□□ 0.89
FDPS-212ENST00000487002 CLASRPQ8N2M8 674 aaKnown RBP20.62■□□□□ 0.89
FDPS-212ENST00000487002 GLI3P10071 1580 aa20.62■□□□□ 0.89
FDPS-212ENST00000487002 CWF19L2Q2TBE0 894 aaKnown RBP20.61■□□□□ 0.89
FDPS-212ENST00000487002 DDX17Q92841 729 aaKnown RBP20.61■□□□□ 0.89
FDPS-212ENST00000487002 NEK4P51957 841 aa20.61■□□□□ 0.89
FDPS-212ENST00000487002 GPATCH3Q96I76 525 aa20.61■□□□□ 0.89
FDPS-212ENST00000487002 BAG4O95429 457 aaKnown RBP20.6■□□□□ 0.89
FDPS-212ENST00000487002 RAD50Q92878 1312 aa20.6■□□□□ 0.89
FDPS-212ENST00000487002 SGSM2O43147 1006 aa20.6■□□□□ 0.89
FDPS-212ENST00000487002 HSPA4P34932 840 aa20.6■□□□□ 0.89
FDPS-212ENST00000487002 NEXNQ0ZGT2 675 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms