RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 KCNA3P22001 575 aa17.35■□□□□ 0.37
NR1H3-223ENST00000486991 FKBP8Q14318 412 aa17.35■□□□□ 0.37
NR1H3-223ENST00000486991 CCDC87Q9NVE4 849 aa17.35■□□□□ 0.37
NR1H3-223ENST00000486991 NUDCQ9Y266 331 aa17.35■□□□□ 0.37
NR1H3-223ENST00000486991 DDR1Q08345 913 aa17.34■□□□□ 0.37
NR1H3-223ENST00000486991 WDR43Q15061 677 aaKnown RBP eCLIP17.34■□□□□ 0.37
NR1H3-223ENST00000486991 PHACTR3Q96KR7 559 aa17.34■□□□□ 0.37
NR1H3-223ENST00000486991 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
NR1H3-223ENST00000486991 INTS5Q6P9B9 1019 aaKnown RBP17.33■□□□□ 0.36
NR1H3-223ENST00000486991 PRKAR2BP31323 418 aa17.32■□□□□ 0.36
NR1H3-223ENST00000486991 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
NR1H3-223ENST00000486991 DNAJC10Q8IXB1 793 aa17.32■□□□□ 0.36
NR1H3-223ENST00000486991 BRCA1P38398 1863 aaKnown RBP17.31■□□□□ 0.36
NR1H3-223ENST00000486991 CEMIPQ8WUJ3 1361 aa17.31■□□□□ 0.36
NR1H3-223ENST00000486991 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
NR1H3-223ENST00000486991 CHRNA5P30532 468 aa17.31■□□□□ 0.36
NR1H3-223ENST00000486991 FAM9BQ8IZU0 186 aa17.31■□□□□ 0.36
NR1H3-223ENST00000486991 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
NR1H3-223ENST00000486991 NMRK2Q9NPI5 230 aa17.31■□□□□ 0.36
NR1H3-223ENST00000486991 U2AF1L5P0DN76 240 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-223ENST00000486991 U2AF1Q01081 240 aaKnown RBP eCLIP17.3■□□□□ 0.36
NR1H3-223ENST00000486991 C9orf131Q5VYM1 1079 aa17.29■□□□□ 0.36
NR1H3-223ENST00000486991 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
NR1H3-223ENST00000486991 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
NR1H3-223ENST00000486991 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
NR1H3-223ENST00000486991 IFFO2Q5TF58 517 aa17.28■□□□□ 0.36
NR1H3-223ENST00000486991 GNAT3A8MTJ3 354 aa17.27■□□□□ 0.36
NR1H3-223ENST00000486991 POLRMTO00411 1230 aaKnown RBP17.27■□□□□ 0.36
NR1H3-223ENST00000486991 TM4SF1P30408 202 aa17.27■□□□□ 0.36
NR1H3-223ENST00000486991 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
NR1H3-223ENST00000486991 CYP19A1P11511 503 aaPredicted RBP17.26■□□□□ 0.35
NR1H3-223ENST00000486991 ADAMTS8Q9UP79 889 aa17.26■□□□□ 0.35
NR1H3-223ENST00000486991 SOS1Q07889 1333 aaPredicted RBP17.25■□□□□ 0.35
NR1H3-223ENST00000486991 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
NR1H3-223ENST00000486991 ARFGEF1Q9Y6D6 1849 aa17.25■□□□□ 0.35
NR1H3-223ENST00000486991 ZPR1O75312 459 aa17.24■□□□□ 0.35
NR1H3-223ENST00000486991 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
NR1H3-223ENST00000486991 ZBTB1Q9Y2K1 713 aa17.24■□□□□ 0.35
NR1H3-223ENST00000486991 KDM3BQ7LBC6 1761 aa17.24■□□□□ 0.35
NR1H3-223ENST00000486991 TOMM70O94826 608 aa17.23■□□□□ 0.35
NR1H3-223ENST00000486991 HTRA3P83110 453 aa17.23■□□□□ 0.35
NR1H3-223ENST00000486991 NFIXQ14938 502 aa17.23■□□□□ 0.35
NR1H3-223ENST00000486991 BCL2L12Q9HB09 334 aa17.23■□□□□ 0.35
NR1H3-223ENST00000486991 RNF181Q9P0P0 153 aa17.23■□□□□ 0.35
NR1H3-223ENST00000486991 CCDC146Q8IYE0 955 aa17.22■□□□□ 0.35
NR1H3-223ENST00000486991 AFDNP55196 1824 aaKnown RBP17.21■□□□□ 0.35
NR1H3-223ENST00000486991 CANXP27824 592 aaKnown RBP17.21■□□□□ 0.35
NR1H3-223ENST00000486991 RASSF7Q02833 373 aa17.21■□□□□ 0.35
NR1H3-223ENST00000486991 PNNQ9H307 717 aaKnown RBP17.21■□□□□ 0.35
NR1H3-223ENST00000486991 COL15A1P39059 1388 aa17.2■□□□□ 0.34
NR1H3-223ENST00000486991 APLP1P51693 650 aa17.2■□□□□ 0.34
NR1H3-223ENST00000486991 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
NR1H3-223ENST00000486991 DNAJC5GQ8N7S2 189 aa17.2■□□□□ 0.34
NR1H3-223ENST00000486991 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
NR1H3-223ENST00000486991 RRAGCQ9HB90 399 aa17.2■□□□□ 0.34
NR1H3-223ENST00000486991 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
NR1H3-223ENST00000486991 HEG1Q9ULI3 1381 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 KCNQ3O43525 872 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 NEFMP07197 916 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 PRELPP51888 382 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 TEFQ10587 303 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 MCM10Q7L590 875 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 SCN7AQ01118 1682 aa17.19■□□□□ 0.34
NR1H3-223ENST00000486991 SBF1O95248 1867 aa17.18■□□□□ 0.34
NR1H3-223ENST00000486991 CARMIL3Q8ND23 1372 aa17.18■□□□□ 0.34
NR1H3-223ENST00000486991 SERPINB2P05120 415 aa17.18■□□□□ 0.34
NR1H3-223ENST00000486991 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
NR1H3-223ENST00000486991 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
NR1H3-223ENST00000486991 RUNDC1Q96C34 613 aa17.18■□□□□ 0.34
NR1H3-223ENST00000486991 MAPK8IP3Q9UPT6 1336 aa17.18■□□□□ 0.34
NR1H3-223ENST00000486991 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
NR1H3-223ENST00000486991 BCORQ6W2J9 1755 aa17.16■□□□□ 0.34
NR1H3-223ENST00000486991 HTATSF1O43719 755 aaKnown RBP17.16■□□□□ 0.34
NR1H3-223ENST00000486991 C16orf71Q8IYS4 520 aaPredicted RBP17.16■□□□□ 0.34
NR1H3-223ENST00000486991 RBM46Q8TBY0 533 aaKnown RBP17.16■□□□□ 0.34
NR1H3-223ENST00000486991 NFE2L2Q16236 605 aa17.15■□□□□ 0.34
NR1H3-223ENST00000486991 C2CD5Q86YS7 1000 aa17.15■□□□□ 0.34
NR1H3-223ENST00000486991 EIF5P55010 431 aaKnown RBP17.14■□□□□ 0.33
NR1H3-223ENST00000486991 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
NR1H3-223ENST00000486991 TTC5Q8N0Z6 440 aa17.14■□□□□ 0.33
NR1H3-223ENST00000486991 TBC1D2BQ9UPU7 963 aa17.14■□□□□ 0.33
NR1H3-223ENST00000486991 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
NR1H3-223ENST00000486991 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
NR1H3-223ENST00000486991 WDR90Q96KV7 1748 aa17.13■□□□□ 0.33
NR1H3-223ENST00000486991 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
NR1H3-223ENST00000486991 APAF1O14727 1248 aa17.13■□□□□ 0.33
NR1H3-223ENST00000486991 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
NR1H3-223ENST00000486991 TTLL6Q8N841 843 aa17.12■□□□□ 0.33
NR1H3-223ENST00000486991 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
NR1H3-223ENST00000486991 FMNL2Q96PY5 1086 aa17.12■□□□□ 0.33
NR1H3-223ENST00000486991 RRP7AQ9Y3A4 280 aaKnown RBP17.12■□□□□ 0.33
NR1H3-223ENST00000486991 DLEC1Q9Y238 1755 aa17.12■□□□□ 0.33
NR1H3-223ENST00000486991 PRAMEF22A3QJZ6 481 aa17.11■□□□□ 0.33
NR1H3-223ENST00000486991 STARD3NLO95772 234 aa17.11■□□□□ 0.33
NR1H3-223ENST00000486991 A1BGP04217 495 aa17.11■□□□□ 0.33
NR1H3-223ENST00000486991 YTHDC1Q96MU7 727 aaKnown RBP17.11■□□□□ 0.33
NR1H3-223ENST00000486991 THUMPD2Q9BTF0 503 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms