RNA–Protein interactions for RNA: ENST00000486889.1

CTPS1-210, Transcript of CTP synthase 1, humanhuman

TSL 2

Gene CTPS1, Length 568 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-210ENST00000486889 CAMKK2Q96RR4 588 aa12.47□□□□□ -0.41
CTPS1-210ENST00000486889 TNS1Q9HBL0 1735 aaKnown RBP12.47□□□□□ -0.41
CTPS1-210ENST00000486889 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
CTPS1-210ENST00000486889 RGPD3A6NKT7 1758 aaPredicted RBP12.46□□□□□ -0.41
CTPS1-210ENST00000486889 RGPD4Q7Z3J3 1758 aa12.46□□□□□ -0.41
CTPS1-210ENST00000486889 ZNF831Q5JPB2 1677 aa12.46□□□□□ -0.41
CTPS1-210ENST00000486889 KCNQ3O43525 872 aa12.46□□□□□ -0.41
CTPS1-210ENST00000486889 MS4A1P11836 297 aa12.46□□□□□ -0.41
CTPS1-210ENST00000486889 RC3H1Q5TC82 1133 aaKnown RBP12.46□□□□□ -0.41
CTPS1-210ENST00000486889 CCDC87Q9NVE4 849 aa12.46□□□□□ -0.41
CTPS1-210ENST00000486889 STK32BQ9NY57 414 aa12.46□□□□□ -0.41
CTPS1-210ENST00000486889 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
CTPS1-210ENST00000486889 VAMP4O75379 141 aa12.45□□□□□ -0.42
CTPS1-210ENST00000486889 KIF6Q6ZMV9 814 aa12.45□□□□□ -0.42
CTPS1-210ENST00000486889 DNAJC10Q8IXB1 793 aa12.45□□□□□ -0.42
CTPS1-210ENST00000486889 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
CTPS1-210ENST00000486889 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
CTPS1-210ENST00000486889 SMC4Q9NTJ3 1288 aa12.45□□□□□ -0.42
CTPS1-210ENST00000486889 RTCBQ9Y3I0 505 aaKnown RBP12.45□□□□□ -0.42
CTPS1-210ENST00000486889 UBR2Q8IWV8 1755 aa12.45□□□□□ -0.42
CTPS1-210ENST00000486889 CNTNAP4Q9C0A0 1308 aa12.44□□□□□ -0.42
CTPS1-210ENST00000486889 KCPQ6ZWJ8 1503 aa12.44□□□□□ -0.42
CTPS1-210ENST00000486889 ZBTB22O15209 634 aa12.44□□□□□ -0.42
CTPS1-210ENST00000486889 CYP19A1P11511 503 aaPredicted RBP12.44□□□□□ -0.42
CTPS1-210ENST00000486889 ARXQ96QS3 562 aa12.44□□□□□ -0.42
CTPS1-210ENST00000486889 DDX21Q9NR30 783 aaKnown RBP eCLIP12.44□□□□□ -0.42
CTPS1-210ENST00000486889 TFCP2L1Q9NZI6 479 aa12.44□□□□□ -0.42
CTPS1-210ENST00000486889 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
CTPS1-210ENST00000486889 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
CTPS1-210ENST00000486889 IL6STP40189 918 aaPredicted RBP12.43□□□□□ -0.42
CTPS1-210ENST00000486889 CRKLP46109 303 aaKnown RBP12.43□□□□□ -0.42
CTPS1-210ENST00000486889 ZNF652Q9Y2D9 606 aa12.43□□□□□ -0.42
CTPS1-210ENST00000486889 ZNF330Q9Y3S2 320 aaPredicted RBP12.43□□□□□ -0.42
CTPS1-210ENST00000486889 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
CTPS1-210ENST00000486889 LY75O60449 1722 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 GNPATO15228 680 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 ZPR1O75312 459 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 MYL6BP14649 208 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 RFC4P35249 363 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
CTPS1-210ENST00000486889 PPP1R1BQ9UD71 204 aaPredicted RBP12.42□□□□□ -0.42
CTPS1-210ENST00000486889 PTPRCP08575 1304 aa12.41□□□□□ -0.42
CTPS1-210ENST00000486889 LAMB4A4D0S4 1761 aa12.41□□□□□ -0.42
CTPS1-210ENST00000486889 MSH5O43196 834 aa12.41□□□□□ -0.42
CTPS1-210ENST00000486889 RPS6KA4O75676 772 aa12.41□□□□□ -0.42
CTPS1-210ENST00000486889 SSFA2P28290 1259 aa12.41□□□□□ -0.42
CTPS1-210ENST00000486889 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
CTPS1-210ENST00000486889 API5Q9BZZ5 524 aaKnown RBP12.41□□□□□ -0.42
CTPS1-210ENST00000486889 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
CTPS1-210ENST00000486889 LRP5O75197 1615 aa12.4□□□□□ -0.42
CTPS1-210ENST00000486889 CICQ96RK0 1608 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-210ENST00000486889 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
CTPS1-210ENST00000486889 FKBP5Q13451 457 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-210ENST00000486889 ITPK1Q13572 414 aa12.4□□□□□ -0.42
CTPS1-210ENST00000486889 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
CTPS1-210ENST00000486889 HSP90AB3PQ58FF7 597 aa12.4□□□□□ -0.42
CTPS1-210ENST00000486889 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
CTPS1-210ENST00000486889 C5P01031 1676 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 RGL2O15211 777 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 A1BGP04217 495 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
CTPS1-210ENST00000486889 RIC3Q7Z5B4 369 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 FTSJ3Q8IY81 847 aaKnown RBP12.39□□□□□ -0.43
CTPS1-210ENST00000486889 LINC00116Q8NCU8 138 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 ARHGAP45Q92619 1136 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 FRAT1Q92837 279 aaPredicted RBP12.39□□□□□ -0.43
CTPS1-210ENST00000486889 HDAC5Q9UQL6 1122 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 CACNA1FO60840 1977 aa12.39□□□□□ -0.43
CTPS1-210ENST00000486889 AIMP1Q12904 312 aaKnown RBP12.38□□□□□ -0.43
CTPS1-210ENST00000486889 SLC15A2Q16348 729 aa12.38□□□□□ -0.43
CTPS1-210ENST00000486889 ZKSCAN2Q63HK3 967 aa12.38□□□□□ -0.43
CTPS1-210ENST00000486889 DZIP3Q86Y13 1208 aaKnown RBP12.38□□□□□ -0.43
CTPS1-210ENST00000486889 SSH1Q8WYL5 1049 aa12.38□□□□□ -0.43
CTPS1-210ENST00000486889 SLC4A9Q96Q91 983 aa12.38□□□□□ -0.43
CTPS1-210ENST00000486889 LRRC4BQ9NT99 713 aa12.38□□□□□ -0.43
CTPS1-210ENST00000486889 PRAMEF22A3QJZ6 481 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 ERVV-1B6SEH8 477 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 PHF14O94880 888 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 HSP90B1P14625 803 aaKnown RBP12.37□□□□□ -0.43
CTPS1-210ENST00000486889 KCNQ4P56696 695 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 FLIIQ13045 1269 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 INTS5Q6P9B9 1019 aaKnown RBP12.37□□□□□ -0.43
CTPS1-210ENST00000486889 ANKRD13DQ6ZTN6 518 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 COPS6Q7L5N1 327 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 SPON1Q9HCB6 807 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 ZBTB1Q9Y2K1 713 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 COL15A1P39059 1388 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 TJP1Q07157 1748 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 NUP188Q5SRE5 1749 aa12.37□□□□□ -0.43
CTPS1-210ENST00000486889 RREB1Q92766 1687 aa12.36□□□□□ -0.43
CTPS1-210ENST00000486889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.36□□□□□ -0.43
CTPS1-210ENST00000486889 NEFLP07196 543 aa12.36□□□□□ -0.43
CTPS1-210ENST00000486889 EIF5P55010 431 aaKnown RBP12.36□□□□□ -0.43
CTPS1-210ENST00000486889 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
CTPS1-210ENST00000486889 PROM2Q8N271 834 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms