RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 RRAGCQ9HB90 399 aa23.8■■□□□ 1.4
MCF2L-226ENST00000486210 NRXN2Q9P2S2 1712 aa23.79■■□□□ 1.4
MCF2L-226ENST00000486210 KDM2BQ8NHM5 1336 aa23.79■■□□□ 1.4
MCF2L-226ENST00000486210 DLEC1Q9Y238 1755 aa23.78■■□□□ 1.4
MCF2L-226ENST00000486210 CNGB1Q14028 1251 aaPredicted RBP23.78■■□□□ 1.4
MCF2L-226ENST00000486210 CC2D1BQ5T0F9 858 aaKnown RBP23.77■■□□□ 1.4
MCF2L-226ENST00000486210 USPL1Q5W0Q7 1092 aa23.77■■□□□ 1.4
MCF2L-226ENST00000486210 SULT6B1Q6IMI4 303 aa23.77■■□□□ 1.4
MCF2L-226ENST00000486210 MORC1Q86VD1 984 aa23.77■■□□□ 1.4
MCF2L-226ENST00000486210 DNAJC10Q8IXB1 793 aa23.76■■□□□ 1.39
MCF2L-226ENST00000486210 RASSF7Q02833 373 aa23.75■■□□□ 1.39
MCF2L-226ENST00000486210 COL13A1Q5TAT6 717 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-226ENST00000486210 SOS1Q07889 1333 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-226ENST00000486210 PRELPP51888 382 aa23.74■■□□□ 1.39
MCF2L-226ENST00000486210 CCDC88AQ3V6T2 1871 aa23.74■■□□□ 1.39
MCF2L-226ENST00000486210 MRC1P22897 1456 aa23.74■■□□□ 1.39
MCF2L-226ENST00000486210 IL13P35225 146 aa23.73■■□□□ 1.39
MCF2L-226ENST00000486210 LGR6Q9HBX8 967 aa23.72■■□□□ 1.39
MCF2L-226ENST00000486210 NPC1L1Q9UHC9 1359 aa23.72■■□□□ 1.39
MCF2L-226ENST00000486210 TIAM2Q8IVF5 1701 aa23.72■■□□□ 1.39
MCF2L-226ENST00000486210 ZPR1O75312 459 aa23.71■■□□□ 1.39
MCF2L-226ENST00000486210 CYP19A1P11511 503 aaPredicted RBP23.71■■□□□ 1.39
MCF2L-226ENST00000486210 NFIXQ14938 502 aa23.71■■□□□ 1.39
MCF2L-226ENST00000486210 AKAP4Q5JQC9 854 aa23.71■■□□□ 1.39
MCF2L-226ENST00000486210 SLC52A2Q9HAB3 445 aa23.71■■□□□ 1.39
MCF2L-226ENST00000486210 BCL2L12Q9HB09 334 aa23.71■■□□□ 1.39
MCF2L-226ENST00000486210 COL15A1P39059 1388 aa23.69■■□□□ 1.38
MCF2L-226ENST00000486210 SLC39A6Q13433 755 aa23.69■■□□□ 1.38
MCF2L-226ENST00000486210 SMC1BQ8NDV3 1235 aa23.69■■□□□ 1.38
MCF2L-226ENST00000486210 NARFQ9UHQ1 456 aa23.69■■□□□ 1.38
MCF2L-226ENST00000486210 ZBTB1Q9Y2K1 713 aa23.69■■□□□ 1.38
MCF2L-226ENST00000486210 PCNTO95613 3336 aa23.68■■□□□ 1.38
MCF2L-226ENST00000486210 ZC3H4Q9UPT8 1303 aaKnown RBP23.68■■□□□ 1.38
MCF2L-226ENST00000486210 UBR2Q8IWV8 1755 aa23.68■■□□□ 1.38
MCF2L-226ENST00000486210 CARMIL3Q8ND23 1372 aa23.66■■□□□ 1.38
MCF2L-226ENST00000486210 GLTPD2A6NH11 291 aa23.66■■□□□ 1.38
MCF2L-226ENST00000486210 RNMTO43148 476 aaKnown RBP23.66■■□□□ 1.38
MCF2L-226ENST00000486210 ANKRD31Q8N7Z5 1873 aa23.65■■□□□ 1.38
MCF2L-226ENST00000486210 SERPINB2P05120 415 aa23.65■■□□□ 1.38
MCF2L-226ENST00000486210 LMNB1P20700 586 aa23.65■■□□□ 1.38
MCF2L-226ENST00000486210 NFKBIEO00221 500 aa23.63■■□□□ 1.37
MCF2L-226ENST00000486210 TTLL6Q8N841 843 aa23.63■■□□□ 1.37
MCF2L-226ENST00000486210 VEGFAP15692 232 aaPredicted RBP23.62■■□□□ 1.37
MCF2L-226ENST00000486210 DICER1Q9UPY3 1922 aaKnown RBP23.61■■□□□ 1.37
MCF2L-226ENST00000486210 POTECB2RU33 542 aa23.61■■□□□ 1.37
MCF2L-226ENST00000486210 HMOX1P09601 288 aa23.61■■□□□ 1.37
MCF2L-226ENST00000486210 C2CD5Q86YS7 1000 aa23.61■■□□□ 1.37
MCF2L-226ENST00000486210 COL11A2P13942 1736 aaPredicted RBP23.61■■□□□ 1.37
MCF2L-226ENST00000486210 FER1L6Q2WGJ9 1857 aa23.6■■□□□ 1.37
MCF2L-226ENST00000486210 MTHFSDQ2M296 383 aaKnown RBP23.6■■□□□ 1.37
MCF2L-226ENST00000486210 VSIG10Q8N0Z9 540 aa23.6■■□□□ 1.37
MCF2L-226ENST00000486210 CAPN15O75808 1086 aa23.59■■□□□ 1.37
MCF2L-226ENST00000486210 SCN7AQ01118 1682 aa23.59■■□□□ 1.37
MCF2L-226ENST00000486210 CANXP27824 592 aaKnown RBP23.58■■□□□ 1.37
MCF2L-226ENST00000486210 TNS4Q8IZW8 715 aa23.58■■□□□ 1.37
MCF2L-226ENST00000486210 BICDL1Q6ZP65 573 aa23.57■■□□□ 1.36
MCF2L-226ENST00000486210 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
MCF2L-226ENST00000486210 H0YIN7 160 aa23.56■■□□□ 1.36
MCF2L-226ENST00000486210 HSPA1AP0DMV8 641 aaKnown RBP23.56■■□□□ 1.36
MCF2L-226ENST00000486210 HSPA1BP0DMV9 641 aaKnown RBP23.56■■□□□ 1.36
MCF2L-226ENST00000486210 EIF5P55010 431 aaKnown RBP23.56■■□□□ 1.36
MCF2L-226ENST00000486210 PPP2R1AP30153 589 aa23.55■■□□□ 1.36
MCF2L-226ENST00000486210 RALBP1Q15311 655 aa23.55■■□□□ 1.36
MCF2L-226ENST00000486210 TBC1D9BQ66K14 1250 aa23.55■■□□□ 1.36
MCF2L-226ENST00000486210 SIPA1L3O60292 1781 aaPredicted RBP23.55■■□□□ 1.36
MCF2L-226ENST00000486210 CACNA1SQ13698 1873 aa23.54■■□□□ 1.36
MCF2L-226ENST00000486210 DIEXFQ68CQ4 756 aaKnown RBP23.52■■□□□ 1.36
MCF2L-226ENST00000486210 CCDC24Q8N4L8 307 aa23.52■■□□□ 1.36
MCF2L-226ENST00000486210 C21orf2O43822 256 aa23.51■■□□□ 1.35
MCF2L-226ENST00000486210 PRR5LQ6MZQ0 368 aa23.51■■□□□ 1.35
MCF2L-226ENST00000486210 ZNF622Q969S3 477 aaKnown RBP eCLIP23.51■■□□□ 1.35
MCF2L-226ENST00000486210 ZNF219Q9P2Y4 722 aaPredicted RBP23.51■■□□□ 1.35
MCF2L-226ENST00000486210 SLX4Q8IY92 1834 aa23.51■■□□□ 1.35
MCF2L-226ENST00000486210 ANP32CO43423 234 aa23.5■■□□□ 1.35
MCF2L-226ENST00000486210 DPY19L2Q6NUT2 758 aa23.5■■□□□ 1.35
MCF2L-226ENST00000486210 ZNF496Q96IT1 587 aaPredicted RBP23.5■■□□□ 1.35
MCF2L-226ENST00000486210 BRIP1Q9BX63 1249 aa23.5■■□□□ 1.35
MCF2L-226ENST00000486210 ARFGEF2Q9Y6D5 1785 aa23.5■■□□□ 1.35
MCF2L-226ENST00000486210 A0A087WZG4 1122 aa23.49■■□□□ 1.35
MCF2L-226ENST00000486210 STARD3NLO95772 234 aa23.49■■□□□ 1.35
MCF2L-226ENST00000486210 TTC5Q8N0Z6 440 aa23.49■■□□□ 1.35
MCF2L-226ENST00000486210 BCORQ6W2J9 1755 aa23.49■■□□□ 1.35
MCF2L-226ENST00000486210 HEG1Q9ULI3 1381 aa23.49■■□□□ 1.35
MCF2L-226ENST00000486210 DIAPH1O60610 1272 aaKnown RBP23.48■■□□□ 1.35
MCF2L-226ENST00000486210 PDE6BP35913 854 aa23.48■■□□□ 1.35
MCF2L-226ENST00000486210 ERFEQ4G0M1 354 aa23.48■■□□□ 1.35
MCF2L-226ENST00000486210 TBC1D2BQ9UPU7 963 aa23.48■■□□□ 1.35
MCF2L-226ENST00000486210 POTEIP0CG38 1075 aa23.47■■□□□ 1.35
MCF2L-226ENST00000486210 POTEJP0CG39 1038 aa23.47■■□□□ 1.35
MCF2L-226ENST00000486210 IL17REQ8NFR9 667 aa23.47■■□□□ 1.35
MCF2L-226ENST00000486210 MYBBP1AQ9BQG0 1328 aaKnown RBP23.47■■□□□ 1.35
MCF2L-226ENST00000486210 COL3A1P02461 1466 aaPredicted RBP23.47■■□□□ 1.35
MCF2L-226ENST00000486210 ZNF790Q6PG37 636 aa23.46■■□□□ 1.35
MCF2L-226ENST00000486210 LTBP3Q9NS15 1303 aa23.46■■□□□ 1.35
MCF2L-226ENST00000486210 PDZRN3Q9UPQ7 1066 aa23.46■■□□□ 1.35
MCF2L-226ENST00000486210 ZNF330Q9Y3S2 320 aaPredicted RBP23.45■■□□□ 1.34
MCF2L-226ENST00000486210 DDNO94850 711 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-226ENST00000486210 IL6STP40189 918 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-226ENST00000486210 CAMTA2O94983 1202 aa23.43■■□□□ 1.34
MCF2L-226ENST00000486210 A1BGP04217 495 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms