RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-213	ENST00000486116	DPY19L2	Q6NUT2	758 aa		13.72	□□□□□ -0.21
PTPN7-213	ENST00000486116	LTBP1	Q14766	1721 aa		13.71	□□□□□ -0.21
PTPN7-213	ENST00000486116	TMEM88B	A6NKF7	163 aa		13.71	□□□□□ -0.21
PTPN7-213	ENST00000486116	TM4SF1	P30408	202 aa		13.71	□□□□□ -0.21
PTPN7-213	ENST00000486116	KIF24	Q5T7B8	1368 aa		13.71	□□□□□ -0.22
PTPN7-213	ENST00000486116	TONSL	Q96HA7	1378 aa		13.7	□□□□□ -0.22
PTPN7-213	ENST00000486116	ARFGEF2	Q9Y6D5	1785 aa		13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	RASSF10	A6NK89	507 aa		13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	ITGBL1	O95965	494 aa	Predicted RBP	13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	IFNL2	Q8IZJ0	200 aa		13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	TTLL6	Q8N841	843 aa		13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	PUS7	Q96PZ0	661 aa	Known RBP	13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	GGNBP2	Q9H3C7	697 aa		13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	CASP8AP2	Q9UKL3	1982 aa		13.69	□□□□□ -0.22
PTPN7-213	ENST00000486116	FYB1	O15117	783 aa		13.68	□□□□□ -0.22
PTPN7-213	ENST00000486116	DDN	O94850	711 aa	Predicted RBP	13.68	□□□□□ -0.22
PTPN7-213	ENST00000486116	CRKL	P46109	303 aa	Known RBP	13.68	□□□□□ -0.22
PTPN7-213	ENST00000486116	ERFE	Q4G0M1	354 aa		13.68	□□□□□ -0.22
PTPN7-213	ENST00000486116	LDHD	Q86WU2	507 aa		13.68	□□□□□ -0.22
PTPN7-213	ENST00000486116	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
PTPN7-213	ENST00000486116	CARMIL3	Q8ND23	1372 aa		13.68	□□□□□ -0.22
PTPN7-213	ENST00000486116	WDR33	Q9C0J8	1336 aa	Known RBP	13.67	□□□□□ -0.22
PTPN7-213	ENST00000486116	MAP2K1	Q02750	393 aa	Predicted RBP	13.67	□□□□□ -0.22
PTPN7-213	ENST00000486116	DEFB115	Q30KQ5	88 aa		13.66	□□□□□ -0.22
PTPN7-213	ENST00000486116	CFAP44	Q96MT7	982 aa		13.66	□□□□□ -0.22
PTPN7-213	ENST00000486116	SLX4	Q8IY92	1834 aa		13.66	□□□□□ -0.22
PTPN7-213	ENST00000486116	TRPM7	Q96QT4	1865 aa		13.65	□□□□□ -0.22
PTPN7-213	ENST00000486116	USPL1	Q5W0Q7	1092 aa		13.65	□□□□□ -0.22
PTPN7-213	ENST00000486116	C2CD5	Q86YS7	1000 aa		13.65	□□□□□ -0.22
PTPN7-213	ENST00000486116	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.65	□□□□□ -0.22
PTPN7-213	ENST00000486116	EMILIN1	Q9Y6C2	1016 aa		13.65	□□□□□ -0.22
PTPN7-213	ENST00000486116	ERVV-2	B6SEH9	535 aa		13.64	□□□□□ -0.23
PTPN7-213	ENST00000486116	NFIX	Q14938	502 aa		13.64	□□□□□ -0.23
PTPN7-213	ENST00000486116	INTS5	Q6P9B9	1019 aa	Known RBP	13.63	□□□□□ -0.23
PTPN7-213	ENST00000486116	EYA1	Q99502	592 aa		13.63	□□□□□ -0.23
PTPN7-213	ENST00000486116	CARD11	Q9BXL7	1154 aa		13.63	□□□□□ -0.23
PTPN7-213	ENST00000486116	MCOLN1	Q9GZU1	580 aa		13.63	□□□□□ -0.23
PTPN7-213	ENST00000486116	IQCA1L	A6NCM1	817 aa		13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116	C21orf2	O43822	256 aa		13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116	PTCD1	O75127	700 aa	Known RBP	13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116	TSKS	Q9UJT2	592 aa		13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116	SCN11A	Q9UI33	1791 aa		13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116	LTBP3	Q9NS15	1303 aa		13.62	□□□□□ -0.23
PTPN7-213	ENST00000486116		H0YIN7	160 aa		13.61	□□□□□ -0.23
PTPN7-213	ENST00000486116	ZPR1	O75312	459 aa		13.61	□□□□□ -0.23
PTPN7-213	ENST00000486116	SERPINB2	P05120	415 aa		13.61	□□□□□ -0.23
PTPN7-213	ENST00000486116	EAPP	Q56P03	285 aa	Predicted RBP	13.61	□□□□□ -0.23
PTPN7-213	ENST00000486116	SIN3A	Q96ST3	1273 aa		13.6	□□□□□ -0.23
PTPN7-213	ENST00000486116	TAOK3	Q9H2K8	898 aa		13.6	□□□□□ -0.23
PTPN7-213	ENST00000486116	BCL2L12	Q9HB09	334 aa		13.6	□□□□□ -0.23
PTPN7-213	ENST00000486116	ABT1	Q9ULW3	272 aa	Known RBP	13.6	□□□□□ -0.23
PTPN7-213	ENST00000486116	SOS1	Q07889	1333 aa	Predicted RBP	13.6	□□□□□ -0.23
PTPN7-213	ENST00000486116	TESK2	Q96S53	571 aa		13.59	□□□□□ -0.23
PTPN7-213	ENST00000486116	MAP1S	Q66K74	1059 aa	Predicted RBP	13.58	□□□□□ -0.24
PTPN7-213	ENST00000486116	CNTROB	Q8N137	903 aa		13.58	□□□□□ -0.24
PTPN7-213	ENST00000486116	CAPNS2	Q96L46	248 aa		13.58	□□□□□ -0.24
PTPN7-213	ENST00000486116	NARF	Q9UHQ1	456 aa		13.58	□□□□□ -0.24
PTPN7-213	ENST00000486116	CLEC11A	Q9Y240	323 aa		13.58	□□□□□ -0.24
PTPN7-213	ENST00000486116	SCN7A	Q01118	1682 aa		13.58	□□□□□ -0.24
PTPN7-213	ENST00000486116	WASHC2A	Q641Q2	1341 aa		13.58	□□□□□ -0.24
PTPN7-213	ENST00000486116	CABP4	P57796	275 aa		13.57	□□□□□ -0.24
PTPN7-213	ENST00000486116	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	2e-6	■□□□□ 10.4
PTPN7-213	ENST00000486116	BEGAIN	Q9BUH8	593 aa		13.57	□□□□□ -0.24
PTPN7-213	ENST00000486116	ZNF541	Q9H0D2	1346 aa		13.57	□□□□□ -0.24
PTPN7-213	ENST00000486116	COL15A1	P39059	1388 aa		13.57	□□□□□ -0.24
PTPN7-213	ENST00000486116	PPM1G	O15355	546 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-213	ENST00000486116	EPHX2	P34913	555 aa		13.56	□□□□□ -0.24
PTPN7-213	ENST00000486116	PRPF38B	Q5VTL8	546 aa	Known RBP	13.56	□□□□□ -0.24
PTPN7-213	ENST00000486116	CYP4F22	Q6NT55	531 aa		13.56	□□□□□ -0.24
PTPN7-213	ENST00000486116	GPR101	Q96P66	508 aa	Predicted RBP	13.56	□□□□□ -0.24
PTPN7-213	ENST00000486116	HACL1	Q9UJ83	578 aa		13.56	□□□□□ -0.24
PTPN7-213	ENST00000486116	HSP90AB1	P08238	724 aa	Known RBP	13.55	□□□□□ -0.24
PTPN7-213	ENST00000486116	FMR1	Q06787	632 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
PTPN7-213	ENST00000486116	GRM1	Q13255	1194 aa		13.55	□□□□□ -0.24
PTPN7-213	ENST00000486116	DNAJC10	Q8IXB1	793 aa		13.55	□□□□□ -0.24
PTPN7-213	ENST00000486116	BCOR	Q6W2J9	1755 aa		13.54	□□□□□ -0.24
PTPN7-213	ENST00000486116	AOC2	O75106	756 aa		13.54	□□□□□ -0.24
PTPN7-213	ENST00000486116	DGKZ	Q13574	1117 aa		13.54	□□□□□ -0.24
PTPN7-213	ENST00000486116	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN7-213	ENST00000486116	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PTPN7-213	ENST00000486116	ECE1	P42892	770 aa		13.53	□□□□□ -0.24
PTPN7-213	ENST00000486116	NEUROD1	Q13562	356 aa		13.53	□□□□□ -0.24
PTPN7-213	ENST00000486116	NFATC2IP	Q8NCF5	419 aa		13.53	□□□□□ -0.24
PTPN7-213	ENST00000486116	RNF123	Q5XPI4	1314 aa		13.53	□□□□□ -0.24
PTPN7-213	ENST00000486116	UBR2	Q8IWV8	1755 aa		13.53	□□□□□ -0.24
PTPN7-213	ENST00000486116	CYP19A1	P11511	503 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	SOX10	P56693	466 aa		13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	BICDL1	Q6ZP65	573 aa		13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	PNMA8A	Q86V59	439 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	CCDC24	Q8N4L8	307 aa		13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	BRIP1	Q9BX63	1249 aa		13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	ZBTB1	Q9Y2K1	713 aa		13.52	□□□□□ -0.25
PTPN7-213	ENST00000486116	ST20-MTHFS	A0A0A6YYL1	179 aa		13.51	□□□□□ -0.25
PTPN7-213	ENST00000486116	PDE6B	P35913	854 aa		13.51	□□□□□ -0.25
PTPN7-213	ENST00000486116	EIF4A2	Q14240	407 aa	Known RBP	13.51	□□□□□ -0.25
PTPN7-213	ENST00000486116	PRR5L	Q6MZQ0	368 aa		13.51	□□□□□ -0.25
PTPN7-213	ENST00000486116	PRPF40B	Q6NWY9	871 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms