RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 PHKA2P46019 1235 aa10.86□□□□□ -0.67
RTN4-214ENST00000486085 POU4F2Q12837 409 aa10.86□□□□□ -0.67
RTN4-214ENST00000486085 CAPN12Q6ZSI9 719 aa10.86□□□□□ -0.67
RTN4-214ENST00000486085 TAS1R3Q7RTX0 852 aa10.86□□□□□ -0.67
RTN4-214ENST00000486085 LYSMD3Q7Z3D4 306 aa10.86□□□□□ -0.67
RTN4-214ENST00000486085 ZNF232Q9UNY5 417 aa10.86□□□□□ -0.67
RTN4-214ENST00000486085 SERTM1A2A2V5 107 aa10.85□□□□□ -0.67
RTN4-214ENST00000486085 NOS2P35228 1153 aa10.85□□□□□ -0.67
RTN4-214ENST00000486085 TEAD4Q15561 434 aa10.85□□□□□ -0.67
RTN4-214ENST00000486085 C4orf17Q53FE4 359 aa10.85□□□□□ -0.67
RTN4-214ENST00000486085 ZDHHC1Q8WTX9 485 aa10.85□□□□□ -0.67
RTN4-214ENST00000486085 C2orf49Q9BVC5 232 aaPredicted RBP10.85□□□□□ -0.67
RTN4-214ENST00000486085 IVNS1ABPQ9Y6Y0 642 aa10.85□□□□□ -0.67
RTN4-214ENST00000486085 PATL2C9JE40 543 aaKnown RBP10.84□□□□□ -0.67
RTN4-214ENST00000486085 SH3PXD2AQ5TCZ1 1133 aa10.84□□□□□ -0.67
RTN4-214ENST00000486085 Q6ZNB5 142 aa10.84□□□□□ -0.67
RTN4-214ENST00000486085 ZNF295-AS1Q8N0V1 137 aa10.84□□□□□ -0.67
RTN4-214ENST00000486085 STAG2Q8N3U4 1231 aa10.84□□□□□ -0.67
RTN4-214ENST00000486085 L3MBTL2Q969R5 705 aa10.84□□□□□ -0.67
RTN4-214ENST00000486085 SEPT3Q9UH03 358 aa10.84□□□□□ -0.67
RTN4-214ENST00000486085 SPATA31C2B4DYI2 1134 aa10.83□□□□□ -0.68
RTN4-214ENST00000486085 RHOQP17081 205 aa10.83□□□□□ -0.68
RTN4-214ENST00000486085 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
RTN4-214ENST00000486085 NAA30Q147X3 362 aaPredicted RBP10.83□□□□□ -0.68
RTN4-214ENST00000486085 TXNDC2Q86VQ3 553 aa10.83□□□□□ -0.68
RTN4-214ENST00000486085 CCER1Q8TC90 406 aaPredicted RBP10.83□□□□□ -0.68
RTN4-214ENST00000486085 HCN4Q9Y3Q4 1203 aa10.83□□□□□ -0.68
RTN4-214ENST00000486085 NISCHQ9Y2I1 1504 aa10.83□□□□□ -0.68
RTN4-214ENST00000486085 PTCD1O75127 700 aaKnown RBP10.82□□□□□ -0.68
RTN4-214ENST00000486085 NBPF10Q6P3W6 841 aaKnown RBP10.82□□□□□ -0.68
RTN4-214ENST00000486085 AIDAQ96BJ3 306 aa10.82□□□□□ -0.68
RTN4-214ENST00000486085 NGLY1Q96IV0 654 aa10.82□□□□□ -0.68
RTN4-214ENST00000486085 DNMT3LQ9UJW3 386 aa10.82□□□□□ -0.68
RTN4-214ENST00000486085 MTMR7Q9Y216 660 aa10.82□□□□□ -0.68
RTN4-214ENST00000486085 EML1O00423 815 aa10.81□□□□□ -0.68
RTN4-214ENST00000486085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.81□□□□□ -0.686e-8■■□□□ 11.8
RTN4-214ENST00000486085 MAN1A2O60476 641 aa10.8□□□□□ -0.68
RTN4-214ENST00000486085 SERPINB4P48594 390 aa10.8□□□□□ -0.68
RTN4-214ENST00000486085 COL26A1Q96A83 441 aa10.8□□□□□ -0.68
RTN4-214ENST00000486085 GNEQ9Y223 722 aaKnown RBP10.8□□□□□ -0.68
RTN4-214ENST00000486085 SOBPA7XYQ1 873 aa10.79□□□□□ -0.68
RTN4-214ENST00000486085 ABL1P00519 1130 aa10.79□□□□□ -0.68
RTN4-214ENST00000486085 GZF1Q9H116 711 aaPredicted RBP10.79□□□□□ -0.68
RTN4-214ENST00000486085 TXLNAP40222 546 aa10.78□□□□□ -0.68
RTN4-214ENST00000486085 POTEAQ6S8J7 498 aa10.78□□□□□ -0.68
RTN4-214ENST00000486085 GTF3C2Q8WUA4 911 aaPredicted RBP10.78□□□□□ -0.68
RTN4-214ENST00000486085 PHACTR1Q9C0D0 580 aa10.78□□□□□ -0.68
RTN4-214ENST00000486085 TIMMDC1Q9NPL8 285 aa10.78□□□□□ -0.68
RTN4-214ENST00000486085 HIRAP54198 1017 aaPredicted RBP10.77□□□□□ -0.69
RTN4-214ENST00000486085 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.77□□□□□ -0.691e-6■□□□□ 10.6
RTN4-214ENST00000486085 ALDH16A1Q8IZ83 802 aa10.77□□□□□ -0.69
RTN4-214ENST00000486085 SAP130Q9H0E3 1048 aa10.77□□□□□ -0.69
RTN4-214ENST00000486085 SENP2Q9HC62 589 aa10.77□□□□□ -0.69
RTN4-214ENST00000486085 ANO2Q9NQ90 1003 aa10.77□□□□□ -0.69
RTN4-214ENST00000486085 GMPR2Q9P2T1 348 aaKnown RBP10.77□□□□□ -0.69
RTN4-214ENST00000486085 NBPF1Q3BBV0 1214 aa10.76□□□□□ -0.69
RTN4-214ENST00000486085 WDR44Q5JSH3 913 aa10.76□□□□□ -0.69
RTN4-214ENST00000486085 ZNF211Q13398 564 aaPredicted RBP10.75□□□□□ -0.69
RTN4-214ENST00000486085 C16orf46Q6P387 395 aa10.75□□□□□ -0.69
RTN4-214ENST00000486085 KIFC2Q96AC6 838 aa10.75□□□□□ -0.69
RTN4-214ENST00000486085 QTRT2Q9H974 415 aaKnown RBP10.75□□□□□ -0.69
RTN4-214ENST00000486085 DNMT3AQ9Y6K1 912 aaPredicted RBP10.75□□□□□ -0.69
RTN4-214ENST00000486085 LCE2BO14633 110 aa10.74□□□□□ -0.69
RTN4-214ENST00000486085 COX20Q5RI15 118 aa10.74□□□□□ -0.69
RTN4-214ENST00000486085 MSX1P28360 303 aa10.73□□□□□ -0.69
RTN4-214ENST00000486085 MTMR3Q13615 1198 aa10.73□□□□□ -0.69
RTN4-214ENST00000486085 C1orf53Q5VUE5 145 aa10.73□□□□□ -0.69
RTN4-214ENST00000486085 TRIM47Q96LD4 638 aa10.73□□□□□ -0.69
RTN4-214ENST00000486085 A0A1B0GTH6 734 aa10.72□□□□□ -0.69
RTN4-214ENST00000486085 TATP17735 454 aaPredicted RBP10.72□□□□□ -0.69
RTN4-214ENST00000486085 RHPN1Q8TCX5 695 aa10.72□□□□□ -0.69
RTN4-214ENST00000486085 GAS2L1Q99501 681 aaPredicted RBP10.72□□□□□ -0.69
RTN4-214ENST00000486085 ZDHHC3Q9NYG2 299 aa10.72□□□□□ -0.69
RTN4-214ENST00000486085 LRFN2Q9ULH4 789 aa10.72□□□□□ -0.69
RTN4-214ENST00000486085 SOWAHDA6NJG2 315 aa10.71□□□□□ -0.69
RTN4-214ENST00000486085 SNRPBP14678 240 aaKnown RBP10.71□□□□□ -0.69
RTN4-214ENST00000486085 RTN1Q16799 776 aa10.71□□□□□ -0.69
RTN4-214ENST00000486085 BICDL1Q6ZP65 573 aa10.71□□□□□ -0.69
RTN4-214ENST00000486085 HELQQ8TDG4 1101 aa10.71□□□□□ -0.69
RTN4-214ENST00000486085 MYO19Q96H55 970 aa10.71□□□□□ -0.69
RTN4-214ENST00000486085 GPAMQ9HCL2 828 aa10.71□□□□□ -0.69
RTN4-214ENST00000486085 EGFL7Q9UHF1 273 aa10.71□□□□□ -0.69
RTN4-214ENST00000486085 C11orf95C9JLR9 678 aaPredicted RBP10.7□□□□□ -0.7
RTN4-214ENST00000486085 FKBP4Q02790 459 aaKnown RBP eCLIP10.7□□□□□ -0.7
RTN4-214ENST00000486085 PTSQ03393 145 aa10.7□□□□□ -0.7
RTN4-214ENST00000486085 DGKZQ13574 1117 aa10.7□□□□□ -0.7
RTN4-214ENST00000486085 ARSJQ5FYB0 599 aaPredicted RBP10.7□□□□□ -0.7
RTN4-214ENST00000486085 PODXL2Q9NZ53 605 aa10.7□□□□□ -0.7
RTN4-214ENST00000486085 KLK14Q9P0G3 267 aa10.7□□□□□ -0.7
RTN4-214ENST00000486085 DYRK1BQ9Y463 629 aa10.7□□□□□ -0.7
RTN4-214ENST00000486085 H3BRB1 525 aa10.69□□□□□ -0.7
RTN4-214ENST00000486085 ICMTO60725 284 aa10.69□□□□□ -0.7
RTN4-214ENST00000486085 ATP4AP20648 1035 aa10.69□□□□□ -0.7
RTN4-214ENST00000486085 C11orf91Q3C1V1 193 aa10.69□□□□□ -0.7
RTN4-214ENST00000486085 C7orf43Q8WVR3 580 aa10.69□□□□□ -0.7
RTN4-214ENST00000486085 TUT1Q9H6E5 874 aaKnown RBP10.69□□□□□ -0.7
RTN4-214ENST00000486085 SENP3-EIF4A1A0A087X0R7 540 aa10.68□□□□□ -0.7
RTN4-214ENST00000486085 F11P03951 625 aa10.68□□□□□ -0.7
RTN4-214ENST00000486085 SF3B2Q13435 895 aaKnown RBP10.68□□□□□ -0.7
RTN4-214ENST00000486085 GLYCTKQ8IVS8 523 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 267.1 ms