RNA–Protein interactions for RNA: ENST00000486044.1

PDE6D-205, Transcript of phosphodiesterase 6D, humanhuman

TSL 2

Gene PDE6D, Length 1,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-205ENST00000486044 LGR6Q9HBX8 967 aa21.98■■□□□ 1.11
PDE6D-205ENST00000486044 RNMTO43148 476 aaKnown RBP21.97■■□□□ 1.11
PDE6D-205ENST00000486044 NFIXQ14938 502 aa21.97■■□□□ 1.11
PDE6D-205ENST00000486044 SMC1BQ8NDV3 1235 aa21.97■■□□□ 1.11
PDE6D-205ENST00000486044 SBF1O95248 1867 aa21.96■■□□□ 1.11
PDE6D-205ENST00000486044 TNRC6CQ9HCJ0 1690 aaKnown RBP21.96■■□□□ 1.11
PDE6D-205ENST00000486044 ADAMTS7Q9UKP4 1686 aa21.96■■□□□ 1.11
PDE6D-205ENST00000486044 SERPINB2P05120 415 aa21.95■■□□□ 1.1
PDE6D-205ENST00000486044 LMNB1P20700 586 aa21.95■■□□□ 1.1
PDE6D-205ENST00000486044 SLC39A6Q13433 755 aa21.95■■□□□ 1.1
PDE6D-205ENST00000486044 VSIG10Q8N0Z9 540 aa21.95■■□□□ 1.1
PDE6D-205ENST00000486044 JMYQ8N9B5 988 aa21.95■■□□□ 1.1
PDE6D-205ENST00000486044 COL15A1P39059 1388 aa21.95■■□□□ 1.1
PDE6D-205ENST00000486044 HTRA3P83110 453 aa21.94■■□□□ 1.1
PDE6D-205ENST00000486044 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
PDE6D-205ENST00000486044 HMOX1P09601 288 aa21.93■■□□□ 1.1
PDE6D-205ENST00000486044 VEGFAP15692 232 aaPredicted RBP21.93■■□□□ 1.1
PDE6D-205ENST00000486044 ZBTB1Q9Y2K1 713 aa21.93■■□□□ 1.1
PDE6D-205ENST00000486044 MRC1P22897 1456 aa21.92■■□□□ 1.1
PDE6D-205ENST00000486044 H0YIN7 160 aa21.92■■□□□ 1.1
PDE6D-205ENST00000486044 STARD3NLO95772 234 aa21.92■■□□□ 1.1
PDE6D-205ENST00000486044 RASSF7Q02833 373 aa21.92■■□□□ 1.1
PDE6D-205ENST00000486044 GLTPD2A6NH11 291 aa21.91■■□□□ 1.1
PDE6D-205ENST00000486044 AMER1Q5JTC6 1135 aaPredicted RBP21.91■■□□□ 1.1
PDE6D-205ENST00000486044 C2CD5Q86YS7 1000 aa21.91■■□□□ 1.1
PDE6D-205ENST00000486044 AFDNP55196 1824 aaKnown RBP21.91■■□□□ 1.1
PDE6D-205ENST00000486044 A0A087WZG4 1122 aa21.9■■□□□ 1.1
PDE6D-205ENST00000486044 CANXP27824 592 aaKnown RBP21.9■■□□□ 1.1
PDE6D-205ENST00000486044 MTHFSDQ2M296 383 aaKnown RBP21.9■■□□□ 1.1
PDE6D-205ENST00000486044 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
PDE6D-205ENST00000486044 DIAPH1O60610 1272 aaKnown RBP21.89■■□□□ 1.09
PDE6D-205ENST00000486044 BCL2L12Q9HB09 334 aa21.89■■□□□ 1.09
PDE6D-205ENST00000486044 NRXN2Q9P2S2 1712 aa21.89■■□□□ 1.09
PDE6D-205ENST00000486044 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
PDE6D-205ENST00000486044 DPY19L2Q6NUT2 758 aa21.87■■□□□ 1.09
PDE6D-205ENST00000486044 BICDL1Q6ZP65 573 aa21.87■■□□□ 1.09
PDE6D-205ENST00000486044 VIRMAQ69YN4 1812 aaKnown RBP21.87■■□□□ 1.09
PDE6D-205ENST00000486044 DLEC1Q9Y238 1755 aa21.87■■□□□ 1.09
PDE6D-205ENST00000486044 EIF5P55010 431 aaKnown RBP21.86■■□□□ 1.09
PDE6D-205ENST00000486044 TEX13AQ9BXU3 409 aaPredicted RBP21.86■■□□□ 1.09
PDE6D-205ENST00000486044 PDE6BP35913 854 aa21.85■■□□□ 1.09
PDE6D-205ENST00000486044 COL13A1Q5TAT6 717 aaPredicted RBP21.85■■□□□ 1.09
PDE6D-205ENST00000486044 TEFQ10587 303 aa21.84■■□□□ 1.09
PDE6D-205ENST00000486044 NPM2Q86SE8 214 aaKnown RBP21.84■■□□□ 1.09
PDE6D-205ENST00000486044 PRELPP51888 382 aa21.83■■□□□ 1.09
PDE6D-205ENST00000486044 ZNF622Q969S3 477 aaKnown RBP eCLIP21.83■■□□□ 1.09
PDE6D-205ENST00000486044 BRIP1Q9BX63 1249 aa21.83■■□□□ 1.09
PDE6D-205ENST00000486044 NFKBIEO00221 500 aa21.82■■□□□ 1.08
PDE6D-205ENST00000486044 UBR2Q8IWV8 1755 aa21.82■■□□□ 1.08
PDE6D-205ENST00000486044 CCDC88AQ3V6T2 1871 aa21.81■■□□□ 1.08
PDE6D-205ENST00000486044 TBC1D9BQ66K14 1250 aa21.81■■□□□ 1.08
PDE6D-205ENST00000486044 ZNF790Q6PG37 636 aa21.81■■□□□ 1.08
PDE6D-205ENST00000486044 GAS2L2Q8NHY3 880 aa21.81■■□□□ 1.08
PDE6D-205ENST00000486044 ZNF330Q9Y3S2 320 aaPredicted RBP21.81■■□□□ 1.08
PDE6D-205ENST00000486044 CARMIL3Q8ND23 1372 aa21.81■■□□□ 1.08
PDE6D-205ENST00000486044 GNAT3A8MTJ3 354 aa21.8■■□□□ 1.08
PDE6D-205ENST00000486044 NPHP1O15259 732 aa21.8■■□□□ 1.08
PDE6D-205ENST00000486044 IL6STP40189 918 aaPredicted RBP21.8■■□□□ 1.08
PDE6D-205ENST00000486044 CC2D1BQ5T0F9 858 aaKnown RBP21.8■■□□□ 1.08
PDE6D-205ENST00000486044 TNS4Q8IZW8 715 aa21.8■■□□□ 1.08
PDE6D-205ENST00000486044 CCER1Q8TC90 406 aaPredicted RBP21.8■■□□□ 1.08
PDE6D-205ENST00000486044 ZNF496Q96IT1 587 aaPredicted RBP21.8■■□□□ 1.08
PDE6D-205ENST00000486044 TIAM2Q8IVF5 1701 aa21.8■■□□□ 1.08
PDE6D-205ENST00000486044 KIF7Q2M1P5 1343 aa21.8■■□□□ 1.08
PDE6D-205ENST00000486044 HEG1Q9ULI3 1381 aa21.79■■□□□ 1.08
PDE6D-205ENST00000486044 C21orf2O43822 256 aa21.79■■□□□ 1.08
PDE6D-205ENST00000486044 ERFEQ4G0M1 354 aa21.79■■□□□ 1.08
PDE6D-205ENST00000486044 TBC1D2BQ9UPU7 963 aa21.79■■□□□ 1.08
PDE6D-205ENST00000486044 U2SURPO15042 1029 aaKnown RBP21.78■■□□□ 1.08
PDE6D-205ENST00000486044 PER1O15534 1290 aaPredicted RBP21.78■■□□□ 1.08
PDE6D-205ENST00000486044 SETDB2Q96T68 719 aa21.78■■□□□ 1.08
PDE6D-205ENST00000486044 PRR5LQ6MZQ0 368 aa21.77■■□□□ 1.08
PDE6D-205ENST00000486044 IL17REQ8NFR9 667 aa21.77■■□□□ 1.08
PDE6D-205ENST00000486044 CNKSR1Q969H4 720 aa21.77■■□□□ 1.08
PDE6D-205ENST00000486044 FMNL2Q96PY5 1086 aa21.77■■□□□ 1.08
PDE6D-205ENST00000486044 ZNF219Q9P2Y4 722 aaPredicted RBP21.77■■□□□ 1.08
PDE6D-205ENST00000486044 CNBD1Q8NA66 436 aa21.76■■□□□ 1.07
PDE6D-205ENST00000486044 TAOK3Q9H2K8 898 aa21.76■■□□□ 1.07
PDE6D-205ENST00000486044 POTECB2RU33 542 aa21.75■■□□□ 1.07
PDE6D-205ENST00000486044 ST5P78524 1137 aa21.75■■□□□ 1.07
PDE6D-205ENST00000486044 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
PDE6D-205ENST00000486044 LTBP3Q9NS15 1303 aa21.75■■□□□ 1.07
PDE6D-205ENST00000486044 CAPN15O75808 1086 aa21.74■■□□□ 1.07
PDE6D-205ENST00000486044 HSPA1AP0DMV8 641 aaKnown RBP21.74■■□□□ 1.07
PDE6D-205ENST00000486044 HSPA1BP0DMV9 641 aaKnown RBP21.74■■□□□ 1.07
PDE6D-205ENST00000486044 STYK1Q6J9G0 422 aa21.74■■□□□ 1.07
PDE6D-205ENST00000486044 CCDC24Q8N4L8 307 aa21.74■■□□□ 1.07
PDE6D-205ENST00000486044 ANKRD31Q8N7Z5 1873 aa21.74■■□□□ 1.07
PDE6D-205ENST00000486044 PCNTO95613 3336 aa21.73■■□□□ 1.07
PDE6D-205ENST00000486044 SCN7AQ01118 1682 aa21.73■■□□□ 1.07
PDE6D-205ENST00000486044 DICER1Q9UPY3 1922 aaKnown RBP21.73■■□□□ 1.07
PDE6D-205ENST00000486044 FER1L6Q2WGJ9 1857 aa21.73■■□□□ 1.07
PDE6D-205ENST00000486044 A1BGP04217 495 aa21.72■■□□□ 1.07
PDE6D-205ENST00000486044 CHADLQ6NUI6 762 aa21.72■■□□□ 1.07
PDE6D-205ENST00000486044 BTBD11A6QL63 1104 aa21.71■■□□□ 1.07
PDE6D-205ENST00000486044 CAMTA2O94983 1202 aa21.71■■□□□ 1.07
PDE6D-205ENST00000486044 SRGNP10124 158 aa21.71■■□□□ 1.07
PDE6D-205ENST00000486044 DZIP3Q86Y13 1208 aaKnown RBP21.71■■□□□ 1.07
PDE6D-205ENST00000486044 MASTLQ96GX5 879 aa21.71■■□□□ 1.07
PDE6D-205ENST00000486044 NPC1L1Q9UHC9 1359 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms