RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
CPNE1-226ENST00000486021 SLC4A9Q96Q91 983 aa9.89□□□□□ -0.83
CPNE1-226ENST00000486021 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
CPNE1-226ENST00000486021 ZNF652Q9Y2D9 606 aa9.89□□□□□ -0.83
CPNE1-226ENST00000486021 SOS1Q07889 1333 aaPredicted RBP9.88□□□□□ -0.83
CPNE1-226ENST00000486021 KCPQ6ZWJ8 1503 aa9.88□□□□□ -0.83
CPNE1-226ENST00000486021 YBX3P16989 372 aaKnown RBP eCLIP9.88□□□□□ -0.83
CPNE1-226ENST00000486021 IL6STP40189 918 aaPredicted RBP9.88□□□□□ -0.83
CPNE1-226ENST00000486021 LMOD3Q0VAK6 560 aa9.88□□□□□ -0.83
CPNE1-226ENST00000486021 INTS5Q6P9B9 1019 aaKnown RBP9.88□□□□□ -0.83
CPNE1-226ENST00000486021 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
CPNE1-226ENST00000486021 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
CPNE1-226ENST00000486021 C10orf71Q711Q0 1435 aa9.88□□□□□ -0.83
CPNE1-226ENST00000486021 CEMIPQ8WUJ3 1361 aa9.88□□□□□ -0.83
CPNE1-226ENST00000486021 SNRPA1P09661 255 aaKnown RBP9.87□□□□□ -0.83
CPNE1-226ENST00000486021 CANXP27824 592 aaKnown RBP9.87□□□□□ -0.83
CPNE1-226ENST00000486021 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
CPNE1-226ENST00000486021 TAF7Q15545 349 aaPredicted RBP9.87□□□□□ -0.83
CPNE1-226ENST00000486021 USPL1Q5W0Q7 1092 aa9.87□□□□□ -0.83
CPNE1-226ENST00000486021 IL17REQ8NFR9 667 aa9.87□□□□□ -0.83
CPNE1-226ENST00000486021 LAMB4A4D0S4 1761 aa9.87□□□□□ -0.83
CPNE1-226ENST00000486021 DLEC1Q9Y238 1755 aa9.87□□□□□ -0.83
CPNE1-226ENST00000486021 NRXN2Q9P2S2 1712 aa9.87□□□□□ -0.83
CPNE1-226ENST00000486021 CCDC88AQ3V6T2 1871 aa9.87□□□□□ -0.83
CPNE1-226ENST00000486021 RGL2O15211 777 aa9.86□□□□□ -0.83
CPNE1-226ENST00000486021 TM4SF1P30408 202 aa9.86□□□□□ -0.83
CPNE1-226ENST00000486021 PDE6BP35913 854 aa9.86□□□□□ -0.83
CPNE1-226ENST00000486021 DALRD3Q5D0E6 543 aaKnown RBP9.86□□□□□ -0.83
CPNE1-226ENST00000486021 ARHGAP27Q6ZUM4 889 aa9.86□□□□□ -0.83
CPNE1-226ENST00000486021 AMIGO3Q86WK7 504 aa9.86□□□□□ -0.83
CPNE1-226ENST00000486021 ZNF330Q9Y3S2 320 aaPredicted RBP9.86□□□□□ -0.83
CPNE1-226ENST00000486021 PXDNLA1KZ92 1463 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 KIAA1551Q9HCM1 1747 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 A0A0G2JLW4 131 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 H0YIN7 160 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 SERPINB2P05120 415 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 EIF5P55010 431 aaKnown RBP9.85□□□□□ -0.83
CPNE1-226ENST00000486021 C1QTNF8P60827 252 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 ST5P78524 1137 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 FKBP8Q14318 412 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 CLEC4GQ6UXB4 293 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 ZNF496Q96IT1 587 aaPredicted RBP9.85□□□□□ -0.83
CPNE1-226ENST00000486021 SETDB2Q96T68 719 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 ZBTB1Q9Y2K1 713 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 SCN7AQ01118 1682 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 BCORQ6W2J9 1755 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 SBF1O95248 1867 aa9.85□□□□□ -0.83
CPNE1-226ENST00000486021 POLRMTO00411 1230 aaKnown RBP9.84□□□□□ -0.83
CPNE1-226ENST00000486021 DPEP1P16444 411 aa9.84□□□□□ -0.83
CPNE1-226ENST00000486021 WDR43Q15061 677 aaKnown RBP eCLIP9.84□□□□□ -0.83
CPNE1-226ENST00000486021 SMIM5Q71RC9 77 aa9.84□□□□□ -0.83
CPNE1-226ENST00000486021 C16orf71Q8IYS4 520 aaPredicted RBP9.84□□□□□ -0.83
CPNE1-226ENST00000486021 SRP68Q9UHB9 627 aaKnown RBP9.84□□□□□ -0.83
CPNE1-226ENST00000486021 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
CPNE1-226ENST00000486021 KDM3BQ7LBC6 1761 aa9.83□□□□□ -0.84
CPNE1-226ENST00000486021 CACNA1SQ13698 1873 aa9.83□□□□□ -0.84
CPNE1-226ENST00000486021 SOGA3Q5TF21 947 aa9.83□□□□□ -0.84
CPNE1-226ENST00000486021 DZIP3Q86Y13 1208 aaKnown RBP9.83□□□□□ -0.84
CPNE1-226ENST00000486021 PHACTR3Q96KR7 559 aa9.83□□□□□ -0.84
CPNE1-226ENST00000486021 CHMP4AQ9BY43 222 aa9.83□□□□□ -0.84
CPNE1-226ENST00000486021 BABAM1Q9NWV8 329 aa9.83□□□□□ -0.84
CPNE1-226ENST00000486021 DICER1Q9UPY3 1922 aaKnown RBP9.83□□□□□ -0.84
CPNE1-226ENST00000486021 KDM2BQ8NHM5 1336 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 MYBBP1AQ9BQG0 1328 aaKnown RBP9.82□□□□□ -0.84
CPNE1-226ENST00000486021 ZC3H4Q9UPT8 1303 aaKnown RBP9.82□□□□□ -0.84
CPNE1-226ENST00000486021 ATP10DQ9P241 1426 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 NUP98P52948 1817 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 NFIXQ14938 502 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 NFE2L2Q16236 605 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 MCM10Q7L590 875 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 TTLL6Q8N841 843 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 ARFGEF2Q9Y6D5 1785 aa9.82□□□□□ -0.84
CPNE1-226ENST00000486021 TNRC6CQ9HCJ0 1690 aaKnown RBP9.81□□□□□ -0.84
CPNE1-226ENST00000486021 SENP3-EIF4A1A0A087X0R7 540 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 GTF2E1P29083 439 aaPredicted RBP9.81□□□□□ -0.84
CPNE1-226ENST00000486021 TPTE2Q6XPS3 522 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 KIF6Q6ZMV9 814 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 CNBD1Q8NA66 436 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 CNKSR1Q969H4 720 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 BRIP1Q9BX63 1249 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 NYXQ9GZU5 481 aa9.81□□□□□ -0.84
CPNE1-226ENST00000486021 DDX10Q13206 875 aaKnown RBP9.8□□□□□ -0.84
CPNE1-226ENST00000486021 DPY19L2Q6NUT2 758 aa9.8□□□□□ -0.84
CPNE1-226ENST00000486021 C2CD5Q86YS7 1000 aa9.8□□□□□ -0.84
CPNE1-226ENST00000486021 WWC3Q9ULE0 1092 aa9.8□□□□□ -0.84
CPNE1-226ENST00000486021 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
CPNE1-226ENST00000486021 ERBB4Q15303 1308 aa9.8□□□□□ -0.84
CPNE1-226ENST00000486021 ADCY9O60503 1353 aa9.79□□□□□ -0.84
CPNE1-226ENST00000486021 A1BGP04217 495 aa9.79□□□□□ -0.84
CPNE1-226ENST00000486021 RIPK4P57078 832 aa9.79□□□□□ -0.84
CPNE1-226ENST00000486021 CALD1Q05682 793 aaKnown RBP9.79□□□□□ -0.84
CPNE1-226ENST00000486021 DDR1Q08345 913 aa9.79□□□□□ -0.84
CPNE1-226ENST00000486021 NBPF5PQ86XG9 351 aaPredicted RBP9.79□□□□□ -0.84
CPNE1-226ENST00000486021 ZNF622Q969S3 477 aaKnown RBP eCLIP9.79□□□□□ -0.844e-6■■□□□ 12.1
CPNE1-226ENST00000486021 TMX4Q9H1E5 349 aaPredicted RBP9.79□□□□□ -0.84
CPNE1-226ENST00000486021 USP16Q9Y5T5 823 aa9.79□□□□□ -0.84
CPNE1-226ENST00000486021 ANKRD31Q8N7Z5 1873 aa9.79□□□□□ -0.84
CPNE1-226ENST00000486021 ERVV-1B6SEH8 477 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 TOMM70O94826 608 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms