RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 CEP170Q5SW79 1584 aa7.84□□□□□ -1.15
KPNA1-208ENST00000485027 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.84□□□□□ -1.15
KPNA1-208ENST00000485027 DKK1O94907 266 aa7.84□□□□□ -1.15
KPNA1-208ENST00000485027 CUL7Q14999 1698 aa7.84□□□□□ -1.15
KPNA1-208ENST00000485027 CCDC184Q52MB2 194 aa7.84□□□□□ -1.15
KPNA1-208ENST00000485027 USP48Q86UV5 1035 aa7.84□□□□□ -1.15
KPNA1-208ENST00000485027 JADE2Q9NQC1 790 aa7.84□□□□□ -1.15
KPNA1-208ENST00000485027 FGAP02671 866 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 PTMAP06454 111 aaKnown RBP7.83□□□□□ -1.16
KPNA1-208ENST00000485027 CD53P19397 219 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 NR1H3Q13133 447 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 DSC3Q14574 896 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 SLF2Q8IX21 1173 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 TMEM106CQ9BVX2 250 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 ARHGEF10LQ9HCE6 1279 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 SRA1Q9HD15 236 aaKnown RBP7.83□□□□□ -1.16
KPNA1-208ENST00000485027 FANCLQ9NW38 375 aa7.83□□□□□ -1.16
KPNA1-208ENST00000485027 ATF4P18848 351 aaPredicted RBP7.82□□□□□ -1.16
KPNA1-208ENST00000485027 ZNF654Q8IZM8 581 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 TTC13Q8NBP0 860 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 SRPK1Q96SB4 655 aaKnown RBP7.82□□□□□ -1.16
KPNA1-208ENST00000485027 APBA2Q99767 749 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 KLF15Q9UIH9 416 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 KIAA1024Q9UPX6 916 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 RUSC2Q8N2Y8 1516 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 FDX1P10109 184 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 RBM10P98175 930 aaKnown RBP7.82□□□□□ -1.16
KPNA1-208ENST00000485027 SF3B2Q13435 895 aaKnown RBP7.82□□□□□ -1.16
KPNA1-208ENST00000485027 PCGF5Q86SE9 256 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 SDR16C5Q8N3Y7 309 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 PNMA1Q8ND90 353 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 INO80BQ9C086 356 aaPredicted RBP7.82□□□□□ -1.16
KPNA1-208ENST00000485027 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
KPNA1-208ENST00000485027 IFRD1O00458 451 aaPredicted RBP7.81□□□□□ -1.16
KPNA1-208ENST00000485027 CDC45O75419 566 aa7.81□□□□□ -1.16
KPNA1-208ENST00000485027 RGS20O76081 388 aa7.81□□□□□ -1.16
KPNA1-208ENST00000485027 PHF14O94880 888 aa7.81□□□□□ -1.16
KPNA1-208ENST00000485027 CTSHP09668 335 aa7.81□□□□□ -1.16
KPNA1-208ENST00000485027 CKAP2LQ8IYA6 745 aa7.81□□□□□ -1.16
KPNA1-208ENST00000485027 AVENQ9NQS1 362 aaPredicted RBP7.81□□□□□ -1.16
KPNA1-208ENST00000485027 PCDHGA10Q9Y5H3 936 aa7.81□□□□□ -1.16
KPNA1-208ENST00000485027 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 PER1O15534 1290 aaPredicted RBP7.8□□□□□ -1.16
KPNA1-208ENST00000485027 CDKN1CP49918 316 aaPredicted RBP7.8□□□□□ -1.16
KPNA1-208ENST00000485027 PURBQ96QR8 312 aaKnown RBP7.8□□□□□ -1.16
KPNA1-208ENST00000485027 PAGR1Q9BTK6 254 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 FHAD1B1AJZ9 1412 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 NUP160Q12769 1436 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 FAM221BA6H8Z2 402 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 HCLS1P14317 486 aaPredicted RBP7.8□□□□□ -1.16
KPNA1-208ENST00000485027 EHHADHQ08426 723 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 VPS37DQ86XT2 251 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 FAM126AQ9BYI3 521 aaPredicted RBP7.8□□□□□ -1.16
KPNA1-208ENST00000485027 CYLDQ9NQC7 956 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 HOMER2Q9NSB8 354 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 SNTG2Q9NY99 539 aa7.8□□□□□ -1.16
KPNA1-208ENST00000485027 IGHA2P01877 340 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 GJA8P48165 433 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 LRRC41Q15345 812 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 JAMLQ86YT9 394 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 SH3TC2Q8TF17 1288 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 MKL1Q969V6 931 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 NAP1L4Q99733 375 aaKnown RBP7.79□□□□□ -1.16
KPNA1-208ENST00000485027 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 KIF27Q86VH2 1401 aa7.79□□□□□ -1.16
KPNA1-208ENST00000485027 ARAP1Q96P48 1450 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 MTMR2Q13614 643 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 C10orf62Q5T681 223 aaPredicted RBP7.78□□□□□ -1.16
KPNA1-208ENST00000485027 CEP63Q96MT8 703 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 SLKQ9H2G2 1235 aaPredicted RBP7.78□□□□□ -1.16
KPNA1-208ENST00000485027 ARNT2Q9HBZ2 717 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 SCINQ9Y6U3 715 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 ERCC6L2Q5T890 1561 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 NRDCO43847 1150 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 BPNT1O95861 308 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 FOSP01100 380 aaPredicted RBP7.78□□□□□ -1.16
KPNA1-208ENST00000485027 MASP1P48740 699 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 POU5F1BQ06416 359 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 BRDTQ58F21 947 aaPredicted RBP7.78□□□□□ -1.16
KPNA1-208ENST00000485027 SULF1Q8IWU6 871 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 SLAIN1Q8ND83 568 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 C1orf131Q8NDD1 294 aaKnown RBP7.78□□□□□ -1.16
KPNA1-208ENST00000485027 GAS2L2Q8NHY3 880 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 CEP89Q96ST8 783 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 PRKD2Q9BZL6 878 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 ZNF408Q9H9D4 720 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 CASS4Q9NQ75 786 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 CNTN3Q9P232 1028 aa7.78□□□□□ -1.16
KPNA1-208ENST00000485027 TPX2Q9ULW0 747 aaKnown RBP7.78□□□□□ -1.16
KPNA1-208ENST00000485027 ESYT3A0FGR9 886 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 FAM163BP0C2L3 166 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 RASA3Q14644 834 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 NBPF6Q5VWK0 638 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 KIAA0907Q7Z7F0 614 aaPredicted RBP7.77□□□□□ -1.17
KPNA1-208ENST00000485027 PLPP7Q8NBV4 271 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 SYMPKQ92797 1274 aaKnown RBP7.77□□□□□ -1.17
KPNA1-208ENST00000485027 RELTQ969Z4 430 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 NBPF4Q96M43 638 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 NEUROD4Q9HD90 331 aa7.77□□□□□ -1.17
KPNA1-208ENST00000485027 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms