RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 DAPK1P53355 1430 aa12.67□□□□□ -0.38
PATJ-207ENST00000484562 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
PATJ-207ENST00000484562 CCDC12Q8WUD4 166 aaPredicted RBP12.67□□□□□ -0.38
PATJ-207ENST00000484562 A0A087WZG4 1122 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 DDX12PQ92771 950 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
PATJ-207ENST00000484562 NUP88Q99567 741 aaPredicted RBP12.66□□□□□ -0.38
PATJ-207ENST00000484562 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 CCDC194A0A1B0GVG4 234 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 BAG4O95429 457 aaKnown RBP12.66□□□□□ -0.38
PATJ-207ENST00000484562 SSRP1Q08945 709 aaKnown RBP12.66□□□□□ -0.38
PATJ-207ENST00000484562 FERMT3Q86UX7 667 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 LIMCH1Q9UPQ0 1083 aa12.66□□□□□ -0.38
PATJ-207ENST00000484562 KLHL10Q6JEL2 608 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 SCLT1Q96NL6 688 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 KANK3Q6NY19 840 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 PIBF1Q8WXW3 757 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 SPECC1LQ69YQ0 1117 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 CNNM3Q8NE01 707 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 LRRC27Q9C0I9 530 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 EHBP1L1Q8N3D4 1523 aa12.65□□□□□ -0.38
PATJ-207ENST00000484562 TDRD12Q587J7 1177 aaKnown RBP12.65□□□□□ -0.38
PATJ-207ENST00000484562 ZNF444Q8N0Y2 327 aaPredicted RBP12.65□□□□□ -0.38
PATJ-207ENST00000484562 TTC21AQ8NDW8 1320 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 EHBP1Q8NDI1 1231 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 GOPCQ9HD26 462 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
PATJ-207ENST00000484562 SLC5A1P13866 664 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 SPECC1Q5M775 1068 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
PATJ-207ENST00000484562 CEP63Q96MT8 703 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 FERMT1Q9BQL6 677 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 ZNF213O14771 459 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 STX1AQ16623 288 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 MINDY4BA8MYZ0 360 aa12.64□□□□□ -0.39
PATJ-207ENST00000484562 TNNT1P13805 278 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 CTNNA2P26232 953 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 DZIP1Q86YF9 867 aaKnown RBP12.63□□□□□ -0.39
PATJ-207ENST00000484562 CTNNBL1Q8WYA6 563 aaPredicted RBP12.63□□□□□ -0.39
PATJ-207ENST00000484562 UBA5Q9GZZ9 404 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 CALML4Q96GE6 196 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 IFI16Q16666 785 aaKnown RBP12.63□□□□□ -0.39
PATJ-207ENST00000484562 GOLGA8AA7E2F4 631 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 GOLGA8BA8MQT2 603 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 UVSSAQ2YD98 709 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 CATIPQ7Z7H3 387 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
PATJ-207ENST00000484562 FSD2A1L4K1 749 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 MTIF2P46199 727 aaKnown RBP12.63□□□□□ -0.39
PATJ-207ENST00000484562 C6orf163Q5TEZ5 329 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 TCP11L1Q9NUJ3 509 aa12.63□□□□□ -0.39
PATJ-207ENST00000484562 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
PATJ-207ENST00000484562 RAD54L2Q9Y4B4 1467 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 GOLIM4O00461 696 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 NLRP5P59047 1200 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 KIF5BP33176 963 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 GRIN2BQ13224 1484 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 CCDC172P0C7W6 258 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 RRS1Q15050 365 aaKnown RBP12.62□□□□□ -0.39
PATJ-207ENST00000484562 TTF1Q15361 905 aaPredicted RBP12.62□□□□□ -0.39
PATJ-207ENST00000484562 TAF7Q15545 349 aaPredicted RBP12.62□□□□□ -0.39
PATJ-207ENST00000484562 CCDC96Q2M329 555 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 RNF187Q5TA31 235 aaPredicted RBP12.62□□□□□ -0.39
PATJ-207ENST00000484562 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
PATJ-207ENST00000484562 NSD3Q9BZ95 1437 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 SPATA24Q86W54 205 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 FSIP1Q8NA03 581 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.61□□□□□ -0.39
PATJ-207ENST00000484562 BOLA2Q9H3K6 86 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 ZPR1O75312 459 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 HLTFQ14527 1009 aaKnown RBP eCLIP12.61□□□□□ -0.399e-7■■□□□ 12.3
PATJ-207ENST00000484562 EVI5LQ96CN4 794 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 TMOD3Q9NYL9 352 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
PATJ-207ENST00000484562 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
PATJ-207ENST00000484562 RANBP6O60518 1105 aaKnown RBP12.61□□□□□ -0.39
PATJ-207ENST00000484562 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 CCDC40Q4G0X9 1142 aa12.61□□□□□ -0.39
PATJ-207ENST00000484562 DHX37Q8IY37 1157 aaKnown RBP12.61□□□□□ -0.39
PATJ-207ENST00000484562 GRIPAP1Q4V328 841 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 CTR9Q6PD62 1173 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
PATJ-207ENST00000484562 FERP16591 822 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 BICDL1Q6ZP65 573 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 PLVAPQ9BX97 442 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 HYPKQ9NX55 129 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 BCCIPQ9P287 314 aaKnown RBP eCLIP12.6□□□□□ -0.39
PATJ-207ENST00000484562 CFTRP13569 1480 aa12.6□□□□□ -0.39
PATJ-207ENST00000484562 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
PATJ-207ENST00000484562 TSNARE1Q96NA8 513 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms