RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 GLI3P10071 1580 aa8.58□□□□□ -1.04
PTCD3-215ENST00000484203 CRB1P82279 1406 aa8.58□□□□□ -1.04
PTCD3-215ENST00000484203 TOM1L2Q6ZVM7 507 aa8.58□□□□□ -1.04
PTCD3-215ENST00000484203 ZFRQ96KR1 1074 aaKnown RBP8.58□□□□□ -1.04
PTCD3-215ENST00000484203 TESK2Q96S53 571 aa8.58□□□□□ -1.04
PTCD3-215ENST00000484203 SLC12A5Q9H2X9 1139 aa8.58□□□□□ -1.04
PTCD3-215ENST00000484203 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
PTCD3-215ENST00000484203 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
PTCD3-215ENST00000484203 WDR17Q8IZU2 1322 aa8.57□□□□□ -1.04
PTCD3-215ENST00000484203 EDC4Q6P2E9 1401 aaKnown RBP8.57□□□□□ -1.04
PTCD3-215ENST00000484203 TOPAZ1Q8N9V7 1692 aa8.57□□□□□ -1.04
PTCD3-215ENST00000484203 ZBTB7CA1YPR0 619 aa8.57□□□□□ -1.04
PTCD3-215ENST00000484203 CSB-PGBD3P0DP91 1061 aa8.57□□□□□ -1.04
PTCD3-215ENST00000484203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.57□□□□□ -1.04
PTCD3-215ENST00000484203 CARD10Q9BWT7 1032 aa8.57□□□□□ -1.04
PTCD3-215ENST00000484203 PCGF6Q9BYE7 350 aa8.57□□□□□ -1.04
PTCD3-215ENST00000484203 PARD3Q8TEW0 1356 aa8.57□□□□□ -1.04
PTCD3-215ENST00000484203 MARF1Q9Y4F3 1742 aaKnown RBP8.57□□□□□ -1.04
PTCD3-215ENST00000484203 RCCD1A6NED2 376 aa8.56□□□□□ -1.04
PTCD3-215ENST00000484203 DNAJB2P25686 324 aa8.56□□□□□ -1.04
PTCD3-215ENST00000484203 WNT2BQ93097 391 aa8.56□□□□□ -1.04
PTCD3-215ENST00000484203 COG3Q96JB2 828 aa8.56□□□□□ -1.04
PTCD3-215ENST00000484203 AK7Q96M32 723 aa8.56□□□□□ -1.04
PTCD3-215ENST00000484203 USP47Q96K76 1375 aa8.56□□□□□ -1.04
PTCD3-215ENST00000484203 QRICH2Q9H0J4 1663 aa8.56□□□□□ -1.04
PTCD3-215ENST00000484203 RGPD8O14715 1765 aaPredicted RBP8.56□□□□□ -1.04
PTCD3-215ENST00000484203 SLIT3O75094 1523 aa8.55□□□□□ -1.04
PTCD3-215ENST00000484203 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.55□□□□□ -1.04
PTCD3-215ENST00000484203 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
PTCD3-215ENST00000484203 DDB1Q16531 1140 aa8.55□□□□□ -1.04
PTCD3-215ENST00000484203 ANKK1Q8NFD2 765 aa8.55□□□□□ -1.04
PTCD3-215ENST00000484203 CCDC7Q96M83 1385 aa8.55□□□□□ -1.04
PTCD3-215ENST00000484203 COL5A2P05997 1499 aaPredicted RBP8.55□□□□□ -1.04
PTCD3-215ENST00000484203 DISP2A7MBM2 1401 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 CAMTA1Q9Y6Y1 1673 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 ANKRD36BQ8N2N9 1353 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 EXOC5O00471 708 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 SAMD7Q7Z3H4 446 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 DEFB132Q7Z7B7 95 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 NME9Q86XW9 330 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 CCER1Q8TC90 406 aaPredicted RBP8.54□□□□□ -1.04
PTCD3-215ENST00000484203 NLRP7Q8WX94 980 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 PHOX2BQ99453 314 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 ABCC6O95255 1503 aa8.54□□□□□ -1.04
PTCD3-215ENST00000484203 PLCH1Q4KWH8 1693 aa8.53□□□□□ -1.04
PTCD3-215ENST00000484203 NRKQ7Z2Y5 1582 aa8.53□□□□□ -1.04
PTCD3-215ENST00000484203 A0A1W2PP64 1363 aa8.53□□□□□ -1.04
PTCD3-215ENST00000484203 TRIM37O94972 964 aa8.53□□□□□ -1.04
PTCD3-215ENST00000484203 APBA3O96018 575 aa8.53□□□□□ -1.04
PTCD3-215ENST00000484203 SWT1Q5T5J6 900 aaKnown RBP8.53□□□□□ -1.04
PTCD3-215ENST00000484203 NBPF14Q5TI25 921 aa8.53□□□□□ -1.04
PTCD3-215ENST00000484203 ABCA3Q99758 1704 aa8.53□□□□□ -1.04
PTCD3-215ENST00000484203 IP6K1Q92551 441 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 LRCH3Q96II8 777 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 TMEM134Q9H6X4 195 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 NLRP2Q9NX02 1062 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.52□□□□□ -1.05
PTCD3-215ENST00000484203 OVOS2A0A0G2JMS6 1433 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 OVOS2A0A0J9YW53 1432 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 BCL9O00512 1426 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 OVOS2Q6IE36 1432 aa8.52□□□□□ -1.05
PTCD3-215ENST00000484203 CD163L1Q9NR16 1453 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 TRIM66O15016 1216 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 RNF40O75150 1001 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 IL2RBP14784 551 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 HMGB2P26583 209 aaKnown RBP8.51□□□□□ -1.05
PTCD3-215ENST00000484203 AMPHP49418 695 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 BCAMP50895 628 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 PTPN5P54829 565 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 EIF4G2P78344 907 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTCD3-215ENST00000484203 FAM182BQ5T319 152 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 THSD4Q6ZMP0 1018 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 CAMKK2Q96RR4 588 aa8.51□□□□□ -1.05
PTCD3-215ENST00000484203 SOWAHBA6NEL2 793 aa8.5□□□□□ -1.05
PTCD3-215ENST00000484203 PLSCR1O15162 318 aa8.5□□□□□ -1.05
PTCD3-215ENST00000484203 SLC4A3P48751 1232 aa8.5□□□□□ -1.05
PTCD3-215ENST00000484203 MDM2Q00987 491 aaPredicted RBP8.5□□□□□ -1.05
PTCD3-215ENST00000484203 NRAPQ86VF7 1730 aa8.5□□□□□ -1.05
PTCD3-215ENST00000484203 ANKRD24Q8TF21 1146 aa8.5□□□□□ -1.05
PTCD3-215ENST00000484203 PHRF1Q9P1Y6 1649 aaKnown RBP8.5□□□□□ -1.05
PTCD3-215ENST00000484203 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
PTCD3-215ENST00000484203 RTL1A6NKG5 1358 aa8.49□□□□□ -1.05
PTCD3-215ENST00000484203 KIF24Q5T7B8 1368 aa8.49□□□□□ -1.05
PTCD3-215ENST00000484203 CRYBG1Q9Y4K1 1723 aa8.49□□□□□ -1.05
PTCD3-215ENST00000484203 FYB1O15117 783 aa8.49□□□□□ -1.05
PTCD3-215ENST00000484203 DAXXQ9UER7 740 aaPredicted RBP8.49□□□□□ -1.05
PTCD3-215ENST00000484203 LMO7Q8WWI1 1683 aa8.49□□□□□ -1.05
PTCD3-215ENST00000484203 CGNL1Q0VF96 1302 aa8.49□□□□□ -1.05
PTCD3-215ENST00000484203 TTLL12Q14166 644 aaPredicted RBP8.48□□□□□ -1.05
PTCD3-215ENST00000484203 SLF2Q8IX21 1173 aa8.48□□□□□ -1.05
PTCD3-215ENST00000484203 NFAT5O94916 1531 aa8.48□□□□□ -1.05
PTCD3-215ENST00000484203 MAP3K19Q56UN5 1328 aa8.48□□□□□ -1.05
PTCD3-215ENST00000484203 SMG6Q86US8 1419 aaKnown RBP8.47□□□□□ -1.05
PTCD3-215ENST00000484203 HOXC9P31274 260 aa8.47□□□□□ -1.05
PTCD3-215ENST00000484203 PDE4DQ08499 809 aa8.47□□□□□ -1.05
PTCD3-215ENST00000484203 EZH2Q15910 746 aaKnown RBP8.47□□□□□ -1.05
PTCD3-215ENST00000484203 AMHR2Q16671 573 aa8.47□□□□□ -1.05
PTCD3-215ENST00000484203 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
PTCD3-215ENST00000484203 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
PTCD3-215ENST00000484203 PIK3C2AO00443 1686 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms