RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
NUP50-215ENST00000484186 BCS1LQ9Y276 419 aa12.61□□□□□ -0.39
NUP50-215ENST00000484186 KIF13BQ9NQT8 1826 aa12.6□□□□□ -0.39
NUP50-215ENST00000484186 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
NUP50-215ENST00000484186 POLRMTO00411 1230 aaKnown RBP12.6□□□□□ -0.39
NUP50-215ENST00000484186 CANXP27824 592 aaKnown RBP12.6□□□□□ -0.39
NUP50-215ENST00000484186 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
NUP50-215ENST00000484186 COL15A1P39059 1388 aa12.59□□□□□ -0.39
NUP50-215ENST00000484186 HEG1Q9ULI3 1381 aa12.59□□□□□ -0.39
NUP50-215ENST00000484186 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
NUP50-215ENST00000484186 KCNA3P22001 575 aa12.59□□□□□ -0.39
NUP50-215ENST00000484186 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
NUP50-215ENST00000484186 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
NUP50-215ENST00000484186 ATP10DQ9P241 1426 aa12.59□□□□□ -0.39
NUP50-215ENST00000484186 A0A087WZG4 1122 aa12.58□□□□□ -0.4
NUP50-215ENST00000484186 EIF5P55010 431 aaKnown RBP12.58□□□□□ -0.4
NUP50-215ENST00000484186 BCL2L12Q9HB09 334 aa12.58□□□□□ -0.4
NUP50-215ENST00000484186 PIM2Q9P1W9 311 aa12.58□□□□□ -0.4
NUP50-215ENST00000484186 N4BP2Q86UW6 1770 aaPredicted RBP12.58□□□□□ -0.4
NUP50-215ENST00000484186 ADCY9O60503 1353 aa12.57□□□□□ -0.4
NUP50-215ENST00000484186 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
NUP50-215ENST00000484186 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
NUP50-215ENST00000484186 KCNQ3O43525 872 aa12.57□□□□□ -0.4
NUP50-215ENST00000484186 HTATSF1O43719 755 aaKnown RBP12.57□□□□□ -0.4
NUP50-215ENST00000484186 NFIXQ14938 502 aa12.57□□□□□ -0.4
NUP50-215ENST00000484186 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
NUP50-215ENST00000484186 GPBP1L1Q9HC44 474 aaPredicted RBP12.57□□□□□ -0.4
NUP50-215ENST00000484186 SERPINB2P05120 415 aa12.56□□□□□ -0.4
NUP50-215ENST00000484186 MCM10Q7L590 875 aa12.56□□□□□ -0.4
NUP50-215ENST00000484186 A1BGP04217 495 aa12.55□□□□□ -0.4
NUP50-215ENST00000484186 CHRNA5P30532 468 aa12.55□□□□□ -0.4
NUP50-215ENST00000484186 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
NUP50-215ENST00000484186 DALRD3Q5D0E6 543 aaKnown RBP12.55□□□□□ -0.4
NUP50-215ENST00000484186 ZNF526Q8TF50 670 aaPredicted RBP12.55□□□□□ -0.4
NUP50-215ENST00000484186 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
NUP50-215ENST00000484186 SENP3-EIF4A1A0A087X0R7 540 aa12.54□□□□□ -0.4
NUP50-215ENST00000484186 NEFMP07197 916 aa12.54□□□□□ -0.4
NUP50-215ENST00000484186 DCTN1Q14203 1278 aa12.54□□□□□ -0.4
NUP50-215ENST00000484186 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
NUP50-215ENST00000484186 TBC1D2BQ9UPU7 963 aa12.54□□□□□ -0.4
NUP50-215ENST00000484186 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
NUP50-215ENST00000484186 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
NUP50-215ENST00000484186 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
NUP50-215ENST00000484186 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
NUP50-215ENST00000484186 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
NUP50-215ENST00000484186 TBC1D9BQ66K14 1250 aa12.52□□□□□ -0.41
NUP50-215ENST00000484186 PLEKHF1Q96S99 279 aa12.52□□□□□ -0.41
NUP50-215ENST00000484186 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
NUP50-215ENST00000484186 PRAMEF22A3QJZ6 481 aa12.51□□□□□ -0.41
NUP50-215ENST00000484186 PNNQ9H307 717 aaKnown RBP12.51□□□□□ -0.41
NUP50-215ENST00000484186 CAMTA2O94983 1202 aa12.5□□□□□ -0.41
NUP50-215ENST00000484186 RALBP1Q15311 655 aa12.5□□□□□ -0.41
NUP50-215ENST00000484186 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
NUP50-215ENST00000484186 DZIP3Q86Y13 1208 aaKnown RBP12.5□□□□□ -0.41
NUP50-215ENST00000484186 C2CD5Q86YS7 1000 aa12.5□□□□□ -0.41
NUP50-215ENST00000484186 MIS18AQ9NYP9 233 aa12.5□□□□□ -0.41
NUP50-215ENST00000484186 NRXN2Q9P2S2 1712 aa12.5□□□□□ -0.41
NUP50-215ENST00000484186 AFDNP55196 1824 aaKnown RBP12.5□□□□□ -0.41
NUP50-215ENST00000484186 ARFGEF1Q9Y6D6 1849 aa12.49□□□□□ -0.41
NUP50-215ENST00000484186 H0YIN7 160 aa12.49□□□□□ -0.41
NUP50-215ENST00000484186 PIP4K2AP48426 406 aaPredicted RBP12.49□□□□□ -0.41
NUP50-215ENST00000484186 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
NUP50-215ENST00000484186 TTLL6Q8N841 843 aa12.49□□□□□ -0.41
NUP50-215ENST00000484186 PNISRQ8TF01 805 aaKnown RBP12.49□□□□□ -0.41
NUP50-215ENST00000484186 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
NUP50-215ENST00000484186 KIF3CO14782 793 aa12.48□□□□□ -0.41
NUP50-215ENST00000484186 PDE6BP35913 854 aa12.48□□□□□ -0.41
NUP50-215ENST00000484186 DDX10Q13206 875 aaKnown RBP12.48□□□□□ -0.41
NUP50-215ENST00000484186 PRR5LQ6MZQ0 368 aa12.48□□□□□ -0.41
NUP50-215ENST00000484186 CLEC4GQ6UXB4 293 aa12.48□□□□□ -0.41
NUP50-215ENST00000484186 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
NUP50-215ENST00000484186 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
NUP50-215ENST00000484186 CARMIL3Q8ND23 1372 aa12.47□□□□□ -0.41
NUP50-215ENST00000484186 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
NUP50-215ENST00000484186 NBPF26B4DH59 902 aa12.47□□□□□ -0.41
NUP50-215ENST00000484186 NBPF10Q6P3W6 841 aaKnown RBP12.47□□□□□ -0.41
NUP50-215ENST00000484186 CCDC24Q8N4L8 307 aa12.47□□□□□ -0.41
NUP50-215ENST00000484186 NBPF15Q8N660 670 aa12.47□□□□□ -0.41
NUP50-215ENST00000484186 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
NUP50-215ENST00000484186 NPHP1O15259 732 aa12.46□□□□□ -0.41
NUP50-215ENST00000484186 CNBD1Q8NA66 436 aa12.46□□□□□ -0.41
NUP50-215ENST00000484186 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.41
NUP50-215ENST00000484186 ZNF652Q9Y2D9 606 aa12.46□□□□□ -0.41
NUP50-215ENST00000484186 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
NUP50-215ENST00000484186 RGL2O15211 777 aa12.45□□□□□ -0.42
NUP50-215ENST00000484186 EIF4A1P60842 406 aaKnown RBP12.45□□□□□ -0.42
NUP50-215ENST00000484186 ST5P78524 1137 aa12.45□□□□□ -0.42
NUP50-215ENST00000484186 THUMPD2Q9BTF0 503 aaKnown RBP12.45□□□□□ -0.42
NUP50-215ENST00000484186 HSPA6P17066 643 aa12.44□□□□□ -0.42
NUP50-215ENST00000484186 RIPK4P57078 832 aa12.44□□□□□ -0.42
NUP50-215ENST00000484186 RASSF7Q02833 373 aa12.44□□□□□ -0.42
NUP50-215ENST00000484186 NMRK2Q9NPI5 230 aa12.44□□□□□ -0.42
NUP50-215ENST00000484186 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
NUP50-215ENST00000484186 DLG5Q8TDM6 1919 aa12.43□□□□□ -0.42
NUP50-215ENST00000484186 TOMM70O94826 608 aa12.43□□□□□ -0.42
NUP50-215ENST00000484186 LMNB1P20700 586 aa12.43□□□□□ -0.42
NUP50-215ENST00000484186 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
NUP50-215ENST00000484186 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
NUP50-215ENST00000484186 KDM2BQ8NHM5 1336 aa12.42□□□□□ -0.42
NUP50-215ENST00000484186 SRGNP10124 158 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms