RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 C10orf71Q711Q0 1435 aa22.33■■□□□ 1.17
PCGF3-211ENST00000484141 N4BP2Q86UW6 1770 aaPredicted RBP22.33■■□□□ 1.17
PCGF3-211ENST00000484141 FCHSD2O94868 740 aa22.33■■□□□ 1.17
PCGF3-211ENST00000484141 FKBP8Q14318 412 aa22.33■■□□□ 1.17
PCGF3-211ENST00000484141 NLGN1Q8N2Q7 840 aa22.33■■□□□ 1.17
PCGF3-211ENST00000484141 ZBTB1Q9Y2K1 713 aa22.33■■□□□ 1.17
PCGF3-211ENST00000484141 TEFQ10587 303 aa22.32■■□□□ 1.16
PCGF3-211ENST00000484141 DDX10Q13206 875 aaKnown RBP22.32■■□□□ 1.16
PCGF3-211ENST00000484141 DCTN1Q14203 1278 aa22.32■■□□□ 1.16
PCGF3-211ENST00000484141 MCM10Q7L590 875 aa22.32■■□□□ 1.16
PCGF3-211ENST00000484141 ZNF496Q96IT1 587 aaPredicted RBP22.32■■□□□ 1.16
PCGF3-211ENST00000484141 SOS1Q07889 1333 aaPredicted RBP22.31■■□□□ 1.16
PCGF3-211ENST00000484141 USP42Q9H9J4 1324 aaKnown RBP22.31■■□□□ 1.16
PCGF3-211ENST00000484141 KIF13BQ9NQT8 1826 aa22.31■■□□□ 1.16
PCGF3-211ENST00000484141 CEMIPQ8WUJ3 1361 aa22.31■■□□□ 1.16
PCGF3-211ENST00000484141 DPEP1P16444 411 aa22.31■■□□□ 1.16
PCGF3-211ENST00000484141 C16orf71Q8IYS4 520 aaPredicted RBP22.31■■□□□ 1.16
PCGF3-211ENST00000484141 RBM46Q8TBY0 533 aaKnown RBP22.3■■□□□ 1.16
PCGF3-211ENST00000484141 DDR1Q08345 913 aa22.29■■□□□ 1.16
PCGF3-211ENST00000484141 USPL1Q5W0Q7 1092 aa22.29■■□□□ 1.16
PCGF3-211ENST00000484141 ZNF790Q6PG37 636 aa22.29■■□□□ 1.16
PCGF3-211ENST00000484141 DLG5Q8TDM6 1919 aa22.28■■□□□ 1.16
PCGF3-211ENST00000484141 CANXP27824 592 aaKnown RBP22.28■■□□□ 1.16
PCGF3-211ENST00000484141 C9orf131Q5VYM1 1079 aa22.28■■□□□ 1.16
PCGF3-211ENST00000484141 TTC5Q8N0Z6 440 aa22.28■■□□□ 1.16
PCGF3-211ENST00000484141 PARP3Q9Y6F1 533 aa22.28■■□□□ 1.16
PCGF3-211ENST00000484141 HTRA3P83110 453 aa22.27■■□□□ 1.16
PCGF3-211ENST00000484141 VSIG10Q8N0Z9 540 aa22.27■■□□□ 1.16
PCGF3-211ENST00000484141 KLRG1Q96E93 195 aa22.27■■□□□ 1.16
PCGF3-211ENST00000484141 HEG1Q9ULI3 1381 aa22.26■■□□□ 1.15
PCGF3-211ENST00000484141 PRAMEF22A3QJZ6 481 aa22.26■■□□□ 1.15
PCGF3-211ENST00000484141 WDR90Q96KV7 1748 aa22.26■■□□□ 1.15
PCGF3-211ENST00000484141 COL15A1P39059 1388 aa22.25■■□□□ 1.15
PCGF3-211ENST00000484141 BTBD11A6QL63 1104 aa22.25■■□□□ 1.15
PCGF3-211ENST00000484141 BCL2L12Q9HB09 334 aa22.25■■□□□ 1.15
PCGF3-211ENST00000484141 FSTL1Q12841 308 aa22.24■■□□□ 1.15
PCGF3-211ENST00000484141 COL13A1Q5TAT6 717 aaPredicted RBP22.24■■□□□ 1.15
PCGF3-211ENST00000484141 PLEKHF1Q96S99 279 aa22.24■■□□□ 1.15
PCGF3-211ENST00000484141 TM4SF1P30408 202 aa22.23■■□□□ 1.15
PCGF3-211ENST00000484141 KDM2BQ8NHM5 1336 aa22.23■■□□□ 1.15
PCGF3-211ENST00000484141 AFDNP55196 1824 aaKnown RBP22.22■■□□□ 1.15
PCGF3-211ENST00000484141 POLRMTO00411 1230 aaKnown RBP22.22■■□□□ 1.15
PCGF3-211ENST00000484141 ZPR1O75312 459 aa22.22■■□□□ 1.15
PCGF3-211ENST00000484141 A1BGP04217 495 aa22.22■■□□□ 1.15
PCGF3-211ENST00000484141 KCNA3P22001 575 aa22.22■■□□□ 1.15
PCGF3-211ENST00000484141 PIP4K2AP48426 406 aaPredicted RBP22.22■■□□□ 1.15
PCGF3-211ENST00000484141 JMYQ8N9B5 988 aa22.22■■□□□ 1.15
PCGF3-211ENST00000484141 MIS18AQ9NYP9 233 aa22.22■■□□□ 1.15
PCGF3-211ENST00000484141 PIM2Q9P1W9 311 aa22.22■■□□□ 1.15
PCGF3-211ENST00000484141 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
PCGF3-211ENST00000484141 EIF5P55010 431 aaKnown RBP22.21■■□□□ 1.15
PCGF3-211ENST00000484141 RTF1Q92541 710 aaKnown RBP22.21■■□□□ 1.15
PCGF3-211ENST00000484141 FMNL2Q96PY5 1086 aa22.21■■□□□ 1.15
PCGF3-211ENST00000484141 RNF181Q9P0P0 153 aa22.21■■□□□ 1.15
PCGF3-211ENST00000484141 USP16Q9Y5T5 823 aa22.21■■□□□ 1.15
PCGF3-211ENST00000484141 BRCA1P38398 1863 aaKnown RBP22.2■■□□□ 1.14
PCGF3-211ENST00000484141 CAPN15O75808 1086 aa22.2■■□□□ 1.14
PCGF3-211ENST00000484141 NFIXQ14938 502 aa22.2■■□□□ 1.14
PCGF3-211ENST00000484141 DALRD3Q5D0E6 543 aaKnown RBP22.2■■□□□ 1.14
PCGF3-211ENST00000484141 THUMPD2Q9BTF0 503 aaKnown RBP22.2■■□□□ 1.14
PCGF3-211ENST00000484141 ZNF330Q9Y3S2 320 aaPredicted RBP22.2■■□□□ 1.14
PCGF3-211ENST00000484141 STARD3NLO95772 234 aa22.19■■□□□ 1.14
PCGF3-211ENST00000484141 RRAGCQ9HB90 399 aa22.19■■□□□ 1.14
PCGF3-211ENST00000484141 TBC1D2BQ9UPU7 963 aa22.18■■□□□ 1.14
PCGF3-211ENST00000484141 CHRNA5P30532 468 aa22.17■■□□□ 1.14
PCGF3-211ENST00000484141 BICDL1Q6ZP65 573 aa22.17■■□□□ 1.14
PCGF3-211ENST00000484141 RALBP1Q15311 655 aa22.16■■□□□ 1.14
PCGF3-211ENST00000484141 TNS4Q8IZW8 715 aa22.16■■□□□ 1.14
PCGF3-211ENST00000484141 HTATSF1O43719 755 aaKnown RBP22.15■■□□□ 1.14
PCGF3-211ENST00000484141 TEX13AQ9BXU3 409 aaPredicted RBP22.15■■□□□ 1.14
PCGF3-211ENST00000484141 NRXN2Q9P2S2 1712 aa22.14■■□□□ 1.14
PCGF3-211ENST00000484141 NFE2L2Q16236 605 aa22.14■■□□□ 1.13
PCGF3-211ENST00000484141 TBC1D9BQ66K14 1250 aa22.14■■□□□ 1.13
PCGF3-211ENST00000484141 SMC1BQ8NDV3 1235 aa22.14■■□□□ 1.13
PCGF3-211ENST00000484141 ARFGEF1Q9Y6D6 1849 aa22.14■■□□□ 1.13
PCGF3-211ENST00000484141 SCN7AQ01118 1682 aa22.14■■□□□ 1.13
PCGF3-211ENST00000484141 SERPINB2P05120 415 aa22.13■■□□□ 1.13
PCGF3-211ENST00000484141 TAF7Q15545 349 aaPredicted RBP22.13■■□□□ 1.13
PCGF3-211ENST00000484141 CARMIL3Q8ND23 1372 aa22.12■■□□□ 1.13
PCGF3-211ENST00000484141 IL6STP40189 918 aaPredicted RBP22.12■■□□□ 1.13
PCGF3-211ENST00000484141 CCDC24Q8N4L8 307 aa22.12■■□□□ 1.13
PCGF3-211ENST00000484141 KDM3BQ7LBC6 1761 aa22.12■■□□□ 1.13
PCGF3-211ENST00000484141 MYBBP1AQ9BQG0 1328 aaKnown RBP22.1■■□□□ 1.13
PCGF3-211ENST00000484141 NBPF26B4DH59 902 aa22.1■■□□□ 1.13
PCGF3-211ENST00000484141 CAMTA2O94983 1202 aa22.1■■□□□ 1.13
PCGF3-211ENST00000484141 SNRPA1P09661 255 aaKnown RBP22.1■■□□□ 1.13
PCGF3-211ENST00000484141 NBPF10Q6P3W6 841 aaKnown RBP22.1■■□□□ 1.13
PCGF3-211ENST00000484141 CCDC146Q8IYE0 955 aa22.1■■□□□ 1.13
PCGF3-211ENST00000484141 NBPF15Q8N660 670 aa22.1■■□□□ 1.13
PCGF3-211ENST00000484141 MAPK8IP3Q9UPT6 1336 aa22.09■■□□□ 1.13
PCGF3-211ENST00000484141 A0A087WZG4 1122 aa22.09■■□□□ 1.13
PCGF3-211ENST00000484141 NEFMP07197 916 aa22.09■■□□□ 1.13
PCGF3-211ENST00000484141 PRELPP51888 382 aa22.09■■□□□ 1.13
PCGF3-211ENST00000484141 TNRC6CQ9HCJ0 1690 aaKnown RBP22.09■■□□□ 1.13
PCGF3-211ENST00000484141 BCORQ6W2J9 1755 aa22.09■■□□□ 1.13
PCGF3-211ENST00000484141 ANKRD31Q8N7Z5 1873 aa22.09■■□□□ 1.13
PCGF3-211ENST00000484141 RASSF7Q02833 373 aa22.08■■□□□ 1.13
PCGF3-211ENST00000484141 RRP7AQ9Y3A4 280 aaKnown RBP22.08■■□□□ 1.13
PCGF3-211ENST00000484141 DZIP3Q86Y13 1208 aaKnown RBP22.07■■□□□ 1.12
PCGF3-211ENST00000484141 ZC3H4Q9UPT8 1303 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms