RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
HDAC6-226ENST00000483656 TRPC5Q9UL62 973 aaPredicted RBP12.85□□□□□ -0.35
HDAC6-226ENST00000483656 ASAP1Q9ULH1 1129 aa12.85□□□□□ -0.35
HDAC6-226ENST00000483656 CACNA1FO60840 1977 aa12.84□□□□□ -0.35
HDAC6-226ENST00000483656 ZBTB7BO15156 539 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-226ENST00000483656 AAMPQ13685 434 aa12.84□□□□□ -0.35
HDAC6-226ENST00000483656 INTS3Q68E01 1043 aaKnown RBP12.84□□□□□ -0.35
HDAC6-226ENST00000483656 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
HDAC6-226ENST00000483656 CHMP4AQ9BY43 222 aa12.84□□□□□ -0.35
HDAC6-226ENST00000483656 DBF4Q9UBU7 674 aaPredicted RBP12.84□□□□□ -0.35
HDAC6-226ENST00000483656 DDX19BQ9UMR2 479 aa12.84□□□□□ -0.35
HDAC6-226ENST00000483656 PCDHB15Q9Y5E8 787 aa12.84□□□□□ -0.35
HDAC6-226ENST00000483656 DOT1LQ8TEK3 1739 aa12.84□□□□□ -0.35
HDAC6-226ENST00000483656 F6X3S4 739 aa12.83□□□□□ -0.36
HDAC6-226ENST00000483656 LRP10Q7Z4F1 713 aa12.83□□□□□ -0.36
HDAC6-226ENST00000483656 QTRT2Q9H974 415 aaKnown RBP12.83□□□□□ -0.36
HDAC6-226ENST00000483656 DDX21Q9NR30 783 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDAC6-226ENST00000483656 ZBTB40Q9NUA8 1239 aa12.83□□□□□ -0.36
HDAC6-226ENST00000483656 PTCD1O75127 700 aaKnown RBP12.82□□□□□ -0.36
HDAC6-226ENST00000483656 ACSBG1Q96GR2 724 aa12.82□□□□□ -0.36
HDAC6-226ENST00000483656 SLC4A9Q96Q91 983 aa12.82□□□□□ -0.36
HDAC6-226ENST00000483656 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
HDAC6-226ENST00000483656 FKBP5Q13451 457 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-226ENST00000483656 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
HDAC6-226ENST00000483656 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
HDAC6-226ENST00000483656 ADCY9O60503 1353 aa12.81□□□□□ -0.36
HDAC6-226ENST00000483656 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
HDAC6-226ENST00000483656 KCNQ2O43526 872 aa12.8□□□□□ -0.36
HDAC6-226ENST00000483656 IGHDP01880 384 aa12.8□□□□□ -0.36
HDAC6-226ENST00000483656 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
HDAC6-226ENST00000483656 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
HDAC6-226ENST00000483656 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
HDAC6-226ENST00000483656 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-226ENST00000483656 A0A0G2JS52 829 aa12.79□□□□□ -0.36
HDAC6-226ENST00000483656 PIP4K2AP48426 406 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-226ENST00000483656 MYT1Q01538 1121 aa12.79□□□□□ -0.36
HDAC6-226ENST00000483656 DNAJC10Q8IXB1 793 aa12.79□□□□□ -0.36
HDAC6-226ENST00000483656 SEPT12Q8IYM1 358 aa12.79□□□□□ -0.36
HDAC6-226ENST00000483656 VSIG10Q8N0Z9 540 aa12.79□□□□□ -0.36
HDAC6-226ENST00000483656 PI4KAP2A4QPH2 592 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 A1BGP04217 495 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 MYL6BP14649 208 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 CCT4P50991 539 aaKnown RBP12.78□□□□□ -0.36
HDAC6-226ENST00000483656 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 SLC4A10Q6U841 1118 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 PI4KAP1Q8N8J0 262 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 RBM42Q9BTD8 480 aaKnown RBP12.78□□□□□ -0.36
HDAC6-226ENST00000483656 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 PXDNLA1KZ92 1463 aa12.78□□□□□ -0.36
HDAC6-226ENST00000483656 KSR2Q6VAB6 950 aa12.77□□□□□ -0.37
HDAC6-226ENST00000483656 COPS6Q7L5N1 327 aa12.77□□□□□ -0.37
HDAC6-226ENST00000483656 XAGE3Q8WTP9 111 aa12.77□□□□□ -0.37
HDAC6-226ENST00000483656 DNAAF4Q8WXU2 420 aa12.77□□□□□ -0.37
HDAC6-226ENST00000483656 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
HDAC6-226ENST00000483656 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-226ENST00000483656 BEND3Q5T5X7 828 aa12.76□□□□□ -0.37
HDAC6-226ENST00000483656 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-226ENST00000483656 MEIS3Q99687 375 aa12.76□□□□□ -0.37
HDAC6-226ENST00000483656 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-226ENST00000483656 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
HDAC6-226ENST00000483656 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
HDAC6-226ENST00000483656 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-226ENST00000483656 TJP1Q07157 1748 aa12.75□□□□□ -0.37
HDAC6-226ENST00000483656 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
HDAC6-226ENST00000483656 ZNF772Q68DY9 489 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-226ENST00000483656 SIRT2Q8IXJ6 389 aa12.75□□□□□ -0.37
HDAC6-226ENST00000483656 CHMP4BQ9H444 224 aaKnown RBP12.75□□□□□ -0.37
HDAC6-226ENST00000483656 ATP10DQ9P241 1426 aa12.75□□□□□ -0.37
HDAC6-226ENST00000483656 MAP3K2Q9Y2U5 619 aa12.75□□□□□ -0.37
HDAC6-226ENST00000483656 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
HDAC6-226ENST00000483656 HDAC1Q13547 482 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-226ENST00000483656 SRCIN1Q9C0H9 1055 aa12.74□□□□□ -0.37
HDAC6-226ENST00000483656 NHSQ6T4R5 1651 aa12.73□□□□□ -0.37
HDAC6-226ENST00000483656 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
HDAC6-226ENST00000483656 LOC102724428A0A0B4J2F2 783 aa12.73□□□□□ -0.37
HDAC6-226ENST00000483656 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
HDAC6-226ENST00000483656 SIK1P57059 783 aa12.73□□□□□ -0.37
HDAC6-226ENST00000483656 RBM6P78332 1123 aaKnown RBP12.73□□□□□ -0.37
HDAC6-226ENST00000483656 ITPK1Q13572 414 aa12.73□□□□□ -0.37
HDAC6-226ENST00000483656 TTLL7Q6ZT98 887 aa12.73□□□□□ -0.37
HDAC6-226ENST00000483656 SMARCC1Q92922 1105 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-226ENST00000483656 USP44Q9H0E7 712 aa12.73□□□□□ -0.37
HDAC6-226ENST00000483656 RWDD1Q9H446 243 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-226ENST00000483656 STARD3NLO95772 234 aa12.72□□□□□ -0.37
HDAC6-226ENST00000483656 IGKV5-2P06315 115 aa12.72□□□□□ -0.37
HDAC6-226ENST00000483656 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
HDAC6-226ENST00000483656 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
HDAC6-226ENST00000483656 CICQ96RK0 1608 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-226ENST00000483656 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
HDAC6-226ENST00000483656 ALDH1L1O75891 902 aa12.71□□□□□ -0.37
HDAC6-226ENST00000483656 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.37
HDAC6-226ENST00000483656 RIC3Q7Z5B4 369 aa12.71□□□□□ -0.37
HDAC6-226ENST00000483656 LINS1Q8NG48 757 aa12.71□□□□□ -0.37
HDAC6-226ENST00000483656 PLBD2Q8NHP8 589 aa12.71□□□□□ -0.37
HDAC6-226ENST00000483656 METTL22Q9BUU2 404 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-226ENST00000483656 SBF2Q86WG5 1849 aa12.71□□□□□ -0.38
HDAC6-226ENST00000483656 BTAF1O14981 1849 aa12.7□□□□□ -0.38
HDAC6-226ENST00000483656 GNAI3P08754 354 aa12.7□□□□□ -0.38
HDAC6-226ENST00000483656 ATP6V1AP38606 617 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms