RNA–Protein interactions for RNA: ENST00000483503.5

SND1-210, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-210ENST00000483503 NFATC2IPQ8NCF5 419 aa14.78□□□□□ -0.04
SND1-210ENST00000483503 FMNL2Q96PY5 1086 aa14.78□□□□□ -0.04
SND1-210ENST00000483503 ERVV-2B6SEH9 535 aa14.77□□□□□ -0.05
SND1-210ENST00000483503 CDC45O75419 566 aa14.77□□□□□ -0.05
SND1-210ENST00000483503 SNRPA1P09661 255 aaKnown RBP14.77□□□□□ -0.05
SND1-210ENST00000483503 IL2RBP14784 551 aa14.77□□□□□ -0.05
SND1-210ENST00000483503 C22orf23Q9BZE7 217 aa14.77□□□□□ -0.05
SND1-210ENST00000483503 RAB11FIP3O75154 756 aa14.76□□□□□ -0.05
SND1-210ENST00000483503 MFAP1P55081 439 aaKnown RBP14.76□□□□□ -0.05
SND1-210ENST00000483503 NKX1-1Q15270 411 aaPredicted RBP14.76□□□□□ -0.05
SND1-210ENST00000483503 TTC22Q5TAA0 569 aa14.76□□□□□ -0.05
SND1-210ENST00000483503 LRRCC1Q9C099 1032 aa14.76□□□□□ -0.05
SND1-210ENST00000483503 LRRFIP2Q9Y608 721 aaKnown RBP14.76□□□□□ -0.05
SND1-210ENST00000483503 ADCY9O60503 1353 aa14.75□□□□□ -0.05
SND1-210ENST00000483503 HSP90AB4PQ58FF6 505 aa14.75□□□□□ -0.05
SND1-210ENST00000483503 CASC1Q6TDU7 716 aa14.75□□□□□ -0.05
SND1-210ENST00000483503 SSH3Q8TE77 659 aa14.75□□□□□ -0.05
SND1-210ENST00000483503 OSBPL3Q9H4L5 887 aa14.75□□□□□ -0.05
SND1-210ENST00000483503 ERBB4Q15303 1308 aa14.74□□□□□ -0.05
SND1-210ENST00000483503 SLC39A6Q13433 755 aa14.74□□□□□ -0.05
SND1-210ENST00000483503 LARP1Q6PKG0 1096 aaKnown RBP14.74□□□□□ -0.05
SND1-210ENST00000483503 LINS1Q8NG48 757 aa14.74□□□□□ -0.05
SND1-210ENST00000483503 MAP3K2Q9Y2U5 619 aa14.74□□□□□ -0.05
SND1-210ENST00000483503 AHDC1Q5TGY3 1603 aaPredicted RBP14.74□□□□□ -0.05
SND1-210ENST00000483503 NEXNQ0ZGT2 675 aa14.73□□□□□ -0.05
SND1-210ENST00000483503 POLA2Q14181 598 aa14.73□□□□□ -0.05
SND1-210ENST00000483503 ZNF496Q96IT1 587 aaPredicted RBP14.73□□□□□ -0.05
SND1-210ENST00000483503 C9orf78Q9NZ63 289 aaPredicted RBP14.73□□□□□ -0.05
SND1-210ENST00000483503 AOX1Q06278 1338 aa14.72□□□□□ -0.05
SND1-210ENST00000483503 ANXA1P04083 346 aa14.72□□□□□ -0.05
SND1-210ENST00000483503 RBM25P49756 843 aaKnown RBP14.72□□□□□ -0.05
SND1-210ENST00000483503 PDIA6Q15084 440 aa14.72□□□□□ -0.05
SND1-210ENST00000483503 STRN4Q9NRL3 753 aa14.72□□□□□ -0.05
SND1-210ENST00000483503 COL14A1Q05707 1796 aaKnown RBP14.72□□□□□ -0.05
SND1-210ENST00000483503 PNMA6EA0A0J9YXQ4 647 aa14.71□□□□□ -0.05
SND1-210ENST00000483503 APBB1O00213 710 aa14.71□□□□□ -0.05
SND1-210ENST00000483503 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
SND1-210ENST00000483503 MTX1Q13505 466 aa14.71□□□□□ -0.05
SND1-210ENST00000483503 PROSER3Q2NL68 480 aa14.71□□□□□ -0.05
SND1-210ENST00000483503 TBC1D9Q6ZT07 1266 aa14.71□□□□□ -0.05
SND1-210ENST00000483503 PPP1R42Q7Z4L9 355 aa14.71□□□□□ -0.05
SND1-210ENST00000483503 RIC3Q7Z5B4 369 aa14.71□□□□□ -0.05
SND1-210ENST00000483503 COL22A1Q8NFW1 1626 aaPredicted RBP14.7□□□□□ -0.06
SND1-210ENST00000483503 GSPT1P15170 499 aaKnown RBP14.7□□□□□ -0.06
SND1-210ENST00000483503 PDE1AP54750 535 aa14.7□□□□□ -0.06
SND1-210ENST00000483503 EXOC6BQ9Y2D4 811 aa14.7□□□□□ -0.06
SND1-210ENST00000483503 C5P01031 1676 aa14.7□□□□□ -0.06
SND1-210ENST00000483503 UTYO14607 1347 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 ROBO1Q9Y6N7 1651 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 PRAMEF22A3QJZ6 481 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 SRGAP3O43295 1099 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 ERC1Q8IUD2 1116 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 C16orf71Q8IYS4 520 aaPredicted RBP14.69□□□□□ -0.06
SND1-210ENST00000483503 KIF1BPQ96EK5 621 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 STAP2Q9UGK3 403 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 LAMB4A4D0S4 1761 aa14.69□□□□□ -0.06
SND1-210ENST00000483503 SURF6O75683 361 aaKnown RBP14.68□□□□□ -0.06
SND1-210ENST00000483503 NBPF7P0C2Y1 421 aaPredicted RBP14.68□□□□□ -0.06
SND1-210ENST00000483503 AIMP1Q12904 312 aaKnown RBP14.68□□□□□ -0.06
SND1-210ENST00000483503 RTL5Q5HYW3 569 aaPredicted RBP14.68□□□□□ -0.06
SND1-210ENST00000483503 XAGE3Q8WTP9 111 aa14.68□□□□□ -0.06
SND1-210ENST00000483503 METTL22Q9BUU2 404 aaPredicted RBP14.68□□□□□ -0.06
SND1-210ENST00000483503 USP35Q9P2H5 1018 aa14.68□□□□□ -0.06
SND1-210ENST00000483503 GRM8O00222 908 aa14.67□□□□□ -0.06
SND1-210ENST00000483503 MX1P20591 662 aa14.67□□□□□ -0.06
SND1-210ENST00000483503 ANKRD13DQ6ZTN6 518 aa14.67□□□□□ -0.06
SND1-210ENST00000483503 BTG4Q9NY30 223 aa14.67□□□□□ -0.06
SND1-210ENST00000483503 SALL3Q9BXA9 1300 aa14.66□□□□□ -0.06
SND1-210ENST00000483503 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
SND1-210ENST00000483503 MYL6BP14649 208 aa14.66□□□□□ -0.06
SND1-210ENST00000483503 SDSP20132 328 aa14.66□□□□□ -0.06
SND1-210ENST00000483503 SLC4A3P48751 1232 aa14.66□□□□□ -0.06
SND1-210ENST00000483503 COPS6Q7L5N1 327 aa14.66□□□□□ -0.06
SND1-210ENST00000483503 DDX54Q8TDD1 881 aaKnown RBP14.66□□□□□ -0.06
SND1-210ENST00000483503 OTUD7AQ8TE49 926 aaPredicted RBP14.66□□□□□ -0.06
SND1-210ENST00000483503 TEX13AQ9BXU3 409 aaPredicted RBP14.66□□□□□ -0.06
SND1-210ENST00000483503 USP16Q9Y5T5 823 aa14.66□□□□□ -0.06
SND1-210ENST00000483503 UBR2Q8IWV8 1755 aa14.65□□□□□ -0.06
SND1-210ENST00000483503 REC8O95072 547 aa14.65□□□□□ -0.06
SND1-210ENST00000483503 HSCBQ8IWL3 235 aa14.65□□□□□ -0.06
SND1-210ENST00000483503 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
SND1-210ENST00000483503 CDCA7Q9BWT1 371 aaPredicted RBP14.65□□□□□ -0.06
SND1-210ENST00000483503 TMOD3Q9NYL9 352 aa14.65□□□□□ -0.06
SND1-210ENST00000483503 PAPPAQ13219 1627 aa14.65□□□□□ -0.06
SND1-210ENST00000483503 SHANK3Q9BYB0 1731 aa14.64□□□□□ -0.07
SND1-210ENST00000483503 NEURL1BA8MQ27 555 aa14.64□□□□□ -0.07
SND1-210ENST00000483503 OS9Q13438 667 aaPredicted RBP14.64□□□□□ -0.07
SND1-210ENST00000483503 CWF19L2Q2TBE0 894 aaKnown RBP14.64□□□□□ -0.07
SND1-210ENST00000483503 PLBD2Q8NHP8 589 aa14.64□□□□□ -0.07
SND1-210ENST00000483503 SNX21Q969T3 373 aa14.64□□□□□ -0.07
SND1-210ENST00000483503 TNS2Q63HR2 1409 aa14.64□□□□□ -0.07
SND1-210ENST00000483503 COL15A1P39059 1388 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 GCKRQ14397 625 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 LRP10Q7Z4F1 713 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 GPATCH3Q96I76 525 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 MYD88Q99836 296 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 TBC1D2Q9BYX2 928 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
SND1-210ENST00000483503 DISP2A7MBM2 1401 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms