RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 ZBTB1Q9Y2K1 713 aa26.14■■□□□ 1.78
R3HDM1-215ENST00000483021 FCHSD2O94868 740 aa26.13■■□□□ 1.77
R3HDM1-215ENST00000483021 NARFQ9UHQ1 456 aa26.13■■□□□ 1.77
R3HDM1-215ENST00000483021 NUDCQ9Y266 331 aa26.13■■□□□ 1.77
R3HDM1-215ENST00000483021 NRXN2Q9P2S2 1712 aa26.13■■□□□ 1.77
R3HDM1-215ENST00000483021 POLRMTO00411 1230 aaKnown RBP26.12■■□□□ 1.77
R3HDM1-215ENST00000483021 STARD3NLO95772 234 aa26.12■■□□□ 1.77
R3HDM1-215ENST00000483021 TM4SF1P30408 202 aa26.12■■□□□ 1.77
R3HDM1-215ENST00000483021 IL17REQ8NFR9 667 aa26.11■■□□□ 1.77
R3HDM1-215ENST00000483021 ZNF526Q8TF50 670 aaPredicted RBP26.11■■□□□ 1.77
R3HDM1-215ENST00000483021 PIM2Q9P1W9 311 aa26.11■■□□□ 1.77
R3HDM1-215ENST00000483021 CEMIPQ8WUJ3 1361 aa26.1■■□□□ 1.77
R3HDM1-215ENST00000483021 HEG1Q9ULI3 1381 aa26.1■■□□□ 1.77
R3HDM1-215ENST00000483021 KCNA3P22001 575 aa26.1■■□□□ 1.77
R3HDM1-215ENST00000483021 PRKAR2BP31323 418 aa26.1■■□□□ 1.77
R3HDM1-215ENST00000483021 ZNF790Q6PG37 636 aa26.1■■□□□ 1.77
R3HDM1-215ENST00000483021 RSPH6AQ9H0K4 717 aa26.1■■□□□ 1.77
R3HDM1-215ENST00000483021 CEP350Q5VT06 3117 aa26.1■■□□□ 1.77
R3HDM1-215ENST00000483021 TEX13AQ9BXU3 409 aaPredicted RBP26.09■■□□□ 1.77
R3HDM1-215ENST00000483021 SCN7AQ01118 1682 aa26.09■■□□□ 1.77
R3HDM1-215ENST00000483021 PPP2R1AP30153 589 aa26.08■■□□□ 1.77
R3HDM1-215ENST00000483021 ARHGAP27Q6ZUM4 889 aa26.08■■□□□ 1.77
R3HDM1-215ENST00000483021 ZNF496Q96IT1 587 aaPredicted RBP26.08■■□□□ 1.77
R3HDM1-215ENST00000483021 DLEC1Q9Y238 1755 aa26.07■■□□□ 1.76
R3HDM1-215ENST00000483021 A0A087WZG4 1122 aa26.07■■□□□ 1.76
R3HDM1-215ENST00000483021 CANXP27824 592 aaKnown RBP26.07■■□□□ 1.76
R3HDM1-215ENST00000483021 DALRD3Q5D0E6 543 aaKnown RBP26.07■■□□□ 1.76
R3HDM1-215ENST00000483021 NFIXQ14938 502 aa26.06■■□□□ 1.76
R3HDM1-215ENST00000483021 PHACTR3Q96KR7 559 aa26.06■■□□□ 1.76
R3HDM1-215ENST00000483021 FMNL2Q96PY5 1086 aa26.05■■□□□ 1.76
R3HDM1-215ENST00000483021 U2AF1L5P0DN76 240 aaPredicted RBP26.04■■□□□ 1.76
R3HDM1-215ENST00000483021 EIF5P55010 431 aaKnown RBP26.04■■□□□ 1.76
R3HDM1-215ENST00000483021 U2AF1Q01081 240 aaKnown RBP eCLIP26.04■■□□□ 1.76
R3HDM1-215ENST00000483021 CHRNA5P30532 468 aa26.03■■□□□ 1.76
R3HDM1-215ENST00000483021 BCL2L12Q9HB09 334 aa26.03■■□□□ 1.76
R3HDM1-215ENST00000483021 BTBD11A6QL63 1104 aa26.02■■□□□ 1.76
R3HDM1-215ENST00000483021 SERPINB2P05120 415 aa26.01■■□□□ 1.75
R3HDM1-215ENST00000483021 RTF1Q92541 710 aaKnown RBP26.01■■□□□ 1.75
R3HDM1-215ENST00000483021 IL6STP40189 918 aaPredicted RBP26■■□□□ 1.75
R3HDM1-215ENST00000483021 SBF1O95248 1867 aa26■■□□□ 1.75
R3HDM1-215ENST00000483021 BCORQ6W2J9 1755 aa26■■□□□ 1.75
R3HDM1-215ENST00000483021 NPM2Q86SE8 214 aaKnown RBP25.99■■□□□ 1.75
R3HDM1-215ENST00000483021 KIF3CO14782 793 aa25.98■■□□□ 1.75
R3HDM1-215ENST00000483021 C9orf131Q5VYM1 1079 aa25.97■■□□□ 1.75
R3HDM1-215ENST00000483021 ZNF330Q9Y3S2 320 aaPredicted RBP25.97■■□□□ 1.75
R3HDM1-215ENST00000483021 ANKRD31Q8N7Z5 1873 aa25.96■■□□□ 1.75
R3HDM1-215ENST00000483021 HTATSF1O43719 755 aaKnown RBP25.95■■□□□ 1.74
R3HDM1-215ENST00000483021 HSPA6P17066 643 aa25.95■■□□□ 1.74
R3HDM1-215ENST00000483021 CARMIL3Q8ND23 1372 aa25.95■■□□□ 1.74
R3HDM1-215ENST00000483021 DLG5Q8TDM6 1919 aa25.94■■□□□ 1.74
R3HDM1-215ENST00000483021 KCNQ3O43525 872 aa25.94■■□□□ 1.74
R3HDM1-215ENST00000483021 BICDL1Q6ZP65 573 aa25.94■■□□□ 1.74
R3HDM1-215ENST00000483021 NEFMP07197 916 aa25.93■■□□□ 1.74
R3HDM1-215ENST00000483021 TBC1D9BQ66K14 1250 aa25.93■■□□□ 1.74
R3HDM1-215ENST00000483021 MCM10Q7L590 875 aa25.93■■□□□ 1.74
R3HDM1-215ENST00000483021 TBC1D2BQ9UPU7 963 aa25.93■■□□□ 1.74
R3HDM1-215ENST00000483021 H0YIN7 160 aa25.92■■□□□ 1.74
R3HDM1-215ENST00000483021 A1BGP04217 495 aa25.92■■□□□ 1.74
R3HDM1-215ENST00000483021 C2CD5Q86YS7 1000 aa25.92■■□□□ 1.74
R3HDM1-215ENST00000483021 RNF181Q9P0P0 153 aa25.92■■□□□ 1.74
R3HDM1-215ENST00000483021 PDZRN3Q9UPQ7 1066 aa25.92■■□□□ 1.74
R3HDM1-215ENST00000483021 TNRC6CQ9HCJ0 1690 aaKnown RBP25.92■■□□□ 1.74
R3HDM1-215ENST00000483021 LAMB4A4D0S4 1761 aa25.92■■□□□ 1.74
R3HDM1-215ENST00000483021 TTLL6Q8N841 843 aa25.91■■□□□ 1.74
R3HDM1-215ENST00000483021 TOMM70O94826 608 aa25.9■■□□□ 1.74
R3HDM1-215ENST00000483021 SNRPA1P09661 255 aaKnown RBP25.9■■□□□ 1.74
R3HDM1-215ENST00000483021 COL11A2P13942 1736 aaPredicted RBP25.9■■□□□ 1.74
R3HDM1-215ENST00000483021 KDM2BQ8NHM5 1336 aa25.89■■□□□ 1.74
R3HDM1-215ENST00000483021 CAMTA2O94983 1202 aa25.89■■□□□ 1.74
R3HDM1-215ENST00000483021 ZC3H4Q9UPT8 1303 aaKnown RBP25.88■■□□□ 1.73
R3HDM1-215ENST00000483021 PDE6BP35913 854 aa25.88■■□□□ 1.73
R3HDM1-215ENST00000483021 DZIP3Q86Y13 1208 aaKnown RBP25.88■■□□□ 1.73
R3HDM1-215ENST00000483021 SETDB2Q96T68 719 aa25.88■■□□□ 1.73
R3HDM1-215ENST00000483021 BRIP1Q9BX63 1249 aa25.88■■□□□ 1.73
R3HDM1-215ENST00000483021 NMRK2Q9NPI5 230 aa25.88■■□□□ 1.73
R3HDM1-215ENST00000483021 USP16Q9Y5T5 823 aa25.88■■□□□ 1.73
R3HDM1-215ENST00000483021 CCDC88AQ3V6T2 1871 aa25.87■■□□□ 1.73
R3HDM1-215ENST00000483021 KDM3BQ7LBC6 1761 aa25.87■■□□□ 1.73
R3HDM1-215ENST00000483021 DCTN1Q14203 1278 aa25.87■■□□□ 1.73
R3HDM1-215ENST00000483021 PRR5LQ6MZQ0 368 aa25.87■■□□□ 1.73
R3HDM1-215ENST00000483021 TIAM2Q8IVF5 1701 aa25.87■■□□□ 1.73
R3HDM1-215ENST00000483021 TAF7Q15545 349 aaPredicted RBP25.86■■□□□ 1.73
R3HDM1-215ENST00000483021 CNBD1Q8NA66 436 aa25.85■■□□□ 1.73
R3HDM1-215ENST00000483021 ARFGEF2Q9Y6D5 1785 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 PRAMEF22A3QJZ6 481 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 NPHP1O15259 732 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 LMNB1P20700 586 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 RASSF7Q02833 373 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 CACNA1SQ13698 1873 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 CLEC4GQ6UXB4 293 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 ZNF652Q9Y2D9 606 aa25.84■■□□□ 1.73
R3HDM1-215ENST00000483021 ST5P78524 1137 aa25.83■■□□□ 1.73
R3HDM1-215ENST00000483021 C16orf71Q8IYS4 520 aaPredicted RBP25.83■■□□□ 1.73
R3HDM1-215ENST00000483021 PNNQ9H307 717 aaKnown RBP25.83■■□□□ 1.73
R3HDM1-215ENST00000483021 RGL2O15211 777 aa25.82■■□□□ 1.72
R3HDM1-215ENST00000483021 PIP4K2AP48426 406 aaPredicted RBP25.82■■□□□ 1.72
R3HDM1-215ENST00000483021 PNISRQ8TF01 805 aaKnown RBP25.82■■□□□ 1.72
R3HDM1-215ENST00000483021 FER1L6Q2WGJ9 1857 aa25.82■■□□□ 1.72
R3HDM1-215ENST00000483021 RBM46Q8TBY0 533 aaKnown RBP25.81■■□□□ 1.72
R3HDM1-215ENST00000483021 ZNF622Q969S3 477 aaKnown RBP eCLIP25.81■■□□□ 1.725e-7■□□□□ 8.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms