RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 CFAP53Q96M91 514 aa22.26■■□□□ 1.15
RAB11FIP3-209ENST00000483002 PIM2Q9P1W9 311 aa22.26■■□□□ 1.15
RAB11FIP3-209ENST00000483002 KCPQ6ZWJ8 1503 aa22.26■■□□□ 1.15
RAB11FIP3-209ENST00000483002 NARFQ9UHQ1 456 aa22.25■■□□□ 1.15
RAB11FIP3-209ENST00000483002 ADAMTS7Q9UKP4 1686 aa22.24■■□□□ 1.15
RAB11FIP3-209ENST00000483002 PHACTR3Q96KR7 559 aa22.24■■□□□ 1.15
RAB11FIP3-209ENST00000483002 COL15A1P39059 1388 aa22.24■■□□□ 1.15
RAB11FIP3-209ENST00000483002 STARD3NLO95772 234 aa22.23■■□□□ 1.15
RAB11FIP3-209ENST00000483002 CHRNA5P30532 468 aa22.23■■□□□ 1.15
RAB11FIP3-209ENST00000483002 PRKAR2BP31323 418 aa22.23■■□□□ 1.15
RAB11FIP3-209ENST00000483002 NFIXQ14938 502 aa22.23■■□□□ 1.15
RAB11FIP3-209ENST00000483002 ZNF496Q96IT1 587 aaPredicted RBP22.23■■□□□ 1.15
RAB11FIP3-209ENST00000483002 DALRD3Q5D0E6 543 aaKnown RBP22.22■■□□□ 1.15
RAB11FIP3-209ENST00000483002 ZNF790Q6PG37 636 aa22.22■■□□□ 1.15
RAB11FIP3-209ENST00000483002 NUDCQ9Y266 331 aa22.22■■□□□ 1.15
RAB11FIP3-209ENST00000483002 PPP2R1AP30153 589 aa22.2■■□□□ 1.14
RAB11FIP3-209ENST00000483002 RSPH6AQ9H0K4 717 aa22.2■■□□□ 1.14
RAB11FIP3-209ENST00000483002 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
RAB11FIP3-209ENST00000483002 U2AF1L5P0DN76 240 aaPredicted RBP22.19■■□□□ 1.14
RAB11FIP3-209ENST00000483002 U2AF1Q01081 240 aaKnown RBP eCLIP22.19■■□□□ 1.14
RAB11FIP3-209ENST00000483002 TEX13AQ9BXU3 409 aaPredicted RBP22.19■■□□□ 1.14
RAB11FIP3-209ENST00000483002 BRCA1P38398 1863 aaKnown RBP22.19■■□□□ 1.14
RAB11FIP3-209ENST00000483002 HEG1Q9ULI3 1381 aa22.18■■□□□ 1.14
RAB11FIP3-209ENST00000483002 KIF3CO14782 793 aa22.18■■□□□ 1.14
RAB11FIP3-209ENST00000483002 SERPINB2P05120 415 aa22.18■■□□□ 1.14
RAB11FIP3-209ENST00000483002 EIF5P55010 431 aaKnown RBP22.18■■□□□ 1.14
RAB11FIP3-209ENST00000483002 BICDL1Q6ZP65 573 aa22.18■■□□□ 1.14
RAB11FIP3-209ENST00000483002 ZNF330Q9Y3S2 320 aaPredicted RBP22.18■■□□□ 1.14
RAB11FIP3-209ENST00000483002 UBR2Q8IWV8 1755 aa22.17■■□□□ 1.14
RAB11FIP3-209ENST00000483002 A0A087WZG4 1122 aa22.17■■□□□ 1.14
RAB11FIP3-209ENST00000483002 C9orf131Q5VYM1 1079 aa22.17■■□□□ 1.14
RAB11FIP3-209ENST00000483002 FMNL2Q96PY5 1086 aa22.17■■□□□ 1.14
RAB11FIP3-209ENST00000483002 BTBD11A6QL63 1104 aa22.16■■□□□ 1.14
RAB11FIP3-209ENST00000483002 KCNQ3O43525 872 aa22.16■■□□□ 1.14
RAB11FIP3-209ENST00000483002 CEMIPQ8WUJ3 1361 aa22.15■■□□□ 1.14
RAB11FIP3-209ENST00000483002 TBC1D2BQ9UPU7 963 aa22.15■■□□□ 1.14
RAB11FIP3-209ENST00000483002 A1BGP04217 495 aa22.14■■□□□ 1.13
RAB11FIP3-209ENST00000483002 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.13
RAB11FIP3-209ENST00000483002 ARFGEF1Q9Y6D6 1849 aa22.14■■□□□ 1.13
RAB11FIP3-209ENST00000483002 AFDNP55196 1824 aaKnown RBP22.13■■□□□ 1.13
RAB11FIP3-209ENST00000483002 HSPA6P17066 643 aa22.13■■□□□ 1.13
RAB11FIP3-209ENST00000483002 NPM2Q86SE8 214 aaKnown RBP22.13■■□□□ 1.13
RAB11FIP3-209ENST00000483002 IL6STP40189 918 aaPredicted RBP22.12■■□□□ 1.13
RAB11FIP3-209ENST00000483002 TBC1D9BQ66K14 1250 aa22.12■■□□□ 1.13
RAB11FIP3-209ENST00000483002 MCM10Q7L590 875 aa22.12■■□□□ 1.13
RAB11FIP3-209ENST00000483002 SIPA1L3O60292 1781 aaPredicted RBP22.12■■□□□ 1.13
RAB11FIP3-209ENST00000483002 NMRK2Q9NPI5 230 aa22.11■■□□□ 1.13
RAB11FIP3-209ENST00000483002 RNF181Q9P0P0 153 aa22.11■■□□□ 1.13
RAB11FIP3-209ENST00000483002 C2CD5Q86YS7 1000 aa22.1■■□□□ 1.13
RAB11FIP3-209ENST00000483002 USP16Q9Y5T5 823 aa22.1■■□□□ 1.13
RAB11FIP3-209ENST00000483002 H0YIN7 160 aa22.09■■□□□ 1.13
RAB11FIP3-209ENST00000483002 DCTN1Q14203 1278 aa22.09■■□□□ 1.13
RAB11FIP3-209ENST00000483002 TTLL6Q8N841 843 aa22.09■■□□□ 1.13
RAB11FIP3-209ENST00000483002 CEP350Q5VT06 3117 aa22.08■■□□□ 1.13
RAB11FIP3-209ENST00000483002 TOMM70O94826 608 aa22.08■■□□□ 1.13
RAB11FIP3-209ENST00000483002 CCDC24Q8N4L8 307 aa22.08■■□□□ 1.13
RAB11FIP3-209ENST00000483002 NRXN2Q9P2S2 1712 aa22.08■■□□□ 1.12
RAB11FIP3-209ENST00000483002 PRAMEF22A3QJZ6 481 aa22.07■■□□□ 1.12
RAB11FIP3-209ENST00000483002 PIP4K2AP48426 406 aaPredicted RBP22.07■■□□□ 1.12
RAB11FIP3-209ENST00000483002 CARMIL3Q8ND23 1372 aa22.07■■□□□ 1.12
RAB11FIP3-209ENST00000483002 RASSF7Q02833 373 aa22.06■■□□□ 1.12
RAB11FIP3-209ENST00000483002 HTATSF1O43719 755 aaKnown RBP22.05■■□□□ 1.12
RAB11FIP3-209ENST00000483002 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
RAB11FIP3-209ENST00000483002 SNRPA1P09661 255 aaKnown RBP22.05■■□□□ 1.12
RAB11FIP3-209ENST00000483002 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
RAB11FIP3-209ENST00000483002 SETDB2Q96T68 719 aa22.05■■□□□ 1.12
RAB11FIP3-209ENST00000483002 NPHP1O15259 732 aa22.04■■□□□ 1.12
RAB11FIP3-209ENST00000483002 PRR5LQ6MZQ0 368 aa22.04■■□□□ 1.12
RAB11FIP3-209ENST00000483002 ZNF622Q969S3 477 aaKnown RBP eCLIP22.04■■□□□ 1.12
RAB11FIP3-209ENST00000483002 BRIP1Q9BX63 1249 aa22.04■■□□□ 1.12
RAB11FIP3-209ENST00000483002 KDM2BQ8NHM5 1336 aa22.04■■□□□ 1.12
RAB11FIP3-209ENST00000483002 SBF1O95248 1867 aa22.03■■□□□ 1.12
RAB11FIP3-209ENST00000483002 NEFMP07197 916 aa22.03■■□□□ 1.12
RAB11FIP3-209ENST00000483002 PDE6BP35913 854 aa22.03■■□□□ 1.12
RAB11FIP3-209ENST00000483002 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
RAB11FIP3-209ENST00000483002 C16orf71Q8IYS4 520 aaPredicted RBP22.03■■□□□ 1.12
RAB11FIP3-209ENST00000483002 RRAGCQ9HB90 399 aa22.02■■□□□ 1.12
RAB11FIP3-209ENST00000483002 MIS18AQ9NYP9 233 aa22.02■■□□□ 1.12
RAB11FIP3-209ENST00000483002 LMNB1P20700 586 aa22.01■■□□□ 1.11
RAB11FIP3-209ENST00000483002 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
RAB11FIP3-209ENST00000483002 ZNF219Q9P2Y4 722 aaPredicted RBP22.01■■□□□ 1.11
RAB11FIP3-209ENST00000483002 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
RAB11FIP3-209ENST00000483002 SCN7AQ01118 1682 aa21.99■■□□□ 1.11
RAB11FIP3-209ENST00000483002 PRELPP51888 382 aa21.99■■□□□ 1.11
RAB11FIP3-209ENST00000483002 DLEC1Q9Y238 1755 aa21.99■■□□□ 1.11
RAB11FIP3-209ENST00000483002 NBPF26B4DH59 902 aa21.98■■□□□ 1.11
RAB11FIP3-209ENST00000483002 C21orf2O43822 256 aa21.98■■□□□ 1.11
RAB11FIP3-209ENST00000483002 APLP1P51693 650 aa21.98■■□□□ 1.11
RAB11FIP3-209ENST00000483002 ST5P78524 1137 aa21.98■■□□□ 1.11
RAB11FIP3-209ENST00000483002 NBPF10Q6P3W6 841 aaKnown RBP21.98■■□□□ 1.11
RAB11FIP3-209ENST00000483002 NBPF15Q8N660 670 aa21.98■■□□□ 1.11
RAB11FIP3-209ENST00000483002 RBM46Q8TBY0 533 aaKnown RBP21.98■■□□□ 1.11
RAB11FIP3-209ENST00000483002 ANKRD31Q8N7Z5 1873 aa21.97■■□□□ 1.11
RAB11FIP3-209ENST00000483002 NFKBIEO00221 500 aa21.97■■□□□ 1.11
RAB11FIP3-209ENST00000483002 CLEC4GQ6UXB4 293 aa21.97■■□□□ 1.11
RAB11FIP3-209ENST00000483002 ZNF652Q9Y2D9 606 aa21.97■■□□□ 1.11
RAB11FIP3-209ENST00000483002 NBPF5PQ86XG9 351 aaPredicted RBP21.96■■□□□ 1.11
RAB11FIP3-209ENST00000483002 PLEKHF1Q96S99 279 aa21.96■■□□□ 1.11
RAB11FIP3-209ENST00000483002 ZC3H4Q9UPT8 1303 aaKnown RBP21.95■■□□□ 1.1
RAB11FIP3-209ENST00000483002 CCDC88AQ3V6T2 1871 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms