RNA–Protein interactions for RNA: ENST00000482651.5

HDGF-208, Transcript of heparin binding growth factor, humanhuman

TSL 3

Gene HDGF, Length 966 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-208ENST00000482651 U2SURPO15042 1029 aaKnown RBP11.72□□□□□ -0.53
HDGF-208ENST00000482651 SSFA2P28290 1259 aa11.72□□□□□ -0.53
HDGF-208ENST00000482651 MTHFSDQ2M296 383 aaKnown RBP11.72□□□□□ -0.53
HDGF-208ENST00000482651 AMIGO3Q86WK7 504 aa11.72□□□□□ -0.53
HDGF-208ENST00000482651 FAM212AQ96EL1 285 aa11.72□□□□□ -0.53
HDGF-208ENST00000482651 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
HDGF-208ENST00000482651 RNF39Q9H2S5 420 aa11.72□□□□□ -0.53
HDGF-208ENST00000482651 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
HDGF-208ENST00000482651 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.71□□□□□ -0.53
HDGF-208ENST00000482651 PHF14O94880 888 aa11.71□□□□□ -0.53
HDGF-208ENST00000482651 PPP2R1AP30153 589 aa11.71□□□□□ -0.53
HDGF-208ENST00000482651 DDX10Q13206 875 aaKnown RBP11.71□□□□□ -0.53
HDGF-208ENST00000482651 NFATC2IPQ8NCF5 419 aa11.71□□□□□ -0.53
HDGF-208ENST00000482651 SLC4A9Q96Q91 983 aa11.71□□□□□ -0.53
HDGF-208ENST00000482651 TUBGCP6Q96RT7 1819 aa11.71□□□□□ -0.54
HDGF-208ENST00000482651 GNPATO15228 680 aa11.7□□□□□ -0.54
HDGF-208ENST00000482651 RNMTO43148 476 aaKnown RBP11.7□□□□□ -0.54
HDGF-208ENST00000482651 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
HDGF-208ENST00000482651 SLC52A2Q9HAB3 445 aa11.7□□□□□ -0.54
HDGF-208ENST00000482651 LGR6Q9HBX8 967 aa11.7□□□□□ -0.54
HDGF-208ENST00000482651 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
HDGF-208ENST00000482651 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
HDGF-208ENST00000482651 IL27Q8NEV9 243 aa11.69□□□□□ -0.54
HDGF-208ENST00000482651 GAS2L2Q8NHY3 880 aa11.69□□□□□ -0.54
HDGF-208ENST00000482651 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
HDGF-208ENST00000482651 MRC1P22897 1456 aa11.69□□□□□ -0.54
HDGF-208ENST00000482651 COL24A1Q17RW2 1714 aa11.69□□□□□ -0.54
HDGF-208ENST00000482651 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
HDGF-208ENST00000482651 TAF1LQ8IZX4 1826 aa11.68□□□□□ -0.54
HDGF-208ENST00000482651 PTCD1O75127 700 aaKnown RBP11.68□□□□□ -0.54
HDGF-208ENST00000482651 RTCBQ9Y3I0 505 aaKnown RBP11.68□□□□□ -0.54
HDGF-208ENST00000482651 ZNF831Q5JPB2 1677 aa11.67□□□□□ -0.54
HDGF-208ENST00000482651 GNAT3A8MTJ3 354 aa11.66□□□□□ -0.54
HDGF-208ENST00000482651 RPS6KA4O75676 772 aa11.66□□□□□ -0.54
HDGF-208ENST00000482651 U2AF1L5P0DN76 240 aaPredicted RBP11.66□□□□□ -0.54
HDGF-208ENST00000482651 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
HDGF-208ENST00000482651 U2AF1Q01081 240 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDGF-208ENST00000482651 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
HDGF-208ENST00000482651 YY1P25490 414 aa11.65□□□□□ -0.54
HDGF-208ENST00000482651 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.54
HDGF-208ENST00000482651 E2F4Q16254 413 aa11.65□□□□□ -0.54
HDGF-208ENST00000482651 NLGN2Q8NFZ4 835 aa11.65□□□□□ -0.54
HDGF-208ENST00000482651 PHACTR3Q96KR7 559 aa11.65□□□□□ -0.54
HDGF-208ENST00000482651 CD2APQ9Y5K6 639 aa11.65□□□□□ -0.54
HDGF-208ENST00000482651 ADAMTS7Q9UKP4 1686 aa11.65□□□□□ -0.55
HDGF-208ENST00000482651 UBR3Q6ZT12 1888 aa11.64□□□□□ -0.55
HDGF-208ENST00000482651 FCHSD2O94868 740 aa11.64□□□□□ -0.55
HDGF-208ENST00000482651 PYGBP11216 843 aa11.64□□□□□ -0.55
HDGF-208ENST00000482651 SLC39A6Q13433 755 aa11.64□□□□□ -0.55
HDGF-208ENST00000482651 RASEFQ8IZ41 740 aa11.64□□□□□ -0.55
HDGF-208ENST00000482651 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
HDGF-208ENST00000482651 SCN11AQ9UI33 1791 aa11.64□□□□□ -0.55
HDGF-208ENST00000482651 RFC4P35249 363 aa11.63□□□□□ -0.55
HDGF-208ENST00000482651 TEFQ10587 303 aa11.63□□□□□ -0.55
HDGF-208ENST00000482651 GPR162Q16538 588 aa11.63□□□□□ -0.55
HDGF-208ENST00000482651 DNAJC10Q8IXB1 793 aa11.63□□□□□ -0.55
HDGF-208ENST00000482651 KCPQ6ZWJ8 1503 aa11.63□□□□□ -0.55
HDGF-208ENST00000482651 CEMIPQ8WUJ3 1361 aa11.63□□□□□ -0.55
HDGF-208ENST00000482651 CICQ96RK0 1608 aaPredicted RBP11.63□□□□□ -0.55
HDGF-208ENST00000482651 ANP32CO43423 234 aa11.62□□□□□ -0.55
HDGF-208ENST00000482651 RALBP1Q15311 655 aa11.62□□□□□ -0.55
HDGF-208ENST00000482651 INTS5Q6P9B9 1019 aaKnown RBP11.62□□□□□ -0.55
HDGF-208ENST00000482651 TTC5Q8N0Z6 440 aa11.62□□□□□ -0.55
HDGF-208ENST00000482651 NLGN1Q8N2Q7 840 aa11.62□□□□□ -0.55
HDGF-208ENST00000482651 COL5A3P25940 1745 aaPredicted RBP11.62□□□□□ -0.55
HDGF-208ENST00000482651 MMP10P09238 476 aa11.61□□□□□ -0.55
HDGF-208ENST00000482651 CYP19A1P11511 503 aaPredicted RBP11.61□□□□□ -0.55
HDGF-208ENST00000482651 GYS1P13807 737 aa11.61□□□□□ -0.55
HDGF-208ENST00000482651 DSG3P32926 999 aa11.61□□□□□ -0.55
HDGF-208ENST00000482651 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
HDGF-208ENST00000482651 CCDC87Q9NVE4 849 aa11.61□□□□□ -0.55
HDGF-208ENST00000482651 TJP1Q07157 1748 aa11.6□□□□□ -0.55
HDGF-208ENST00000482651 MNX1P50219 401 aaPredicted RBP11.6□□□□□ -0.55
HDGF-208ENST00000482651 ZNF790Q6PG37 636 aa11.6□□□□□ -0.55
HDGF-208ENST00000482651 KDM4CQ9H3R0 1056 aa11.6□□□□□ -0.55
HDGF-208ENST00000482651 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
HDGF-208ENST00000482651 USP42Q9H9J4 1324 aaKnown RBP11.6□□□□□ -0.55
HDGF-208ENST00000482651 HTATSF1O43719 755 aaKnown RBP11.59□□□□□ -0.55
HDGF-208ENST00000482651 RTF1Q92541 710 aaKnown RBP11.59□□□□□ -0.55
HDGF-208ENST00000482651 ZNF496Q96IT1 587 aaPredicted RBP11.59□□□□□ -0.55
HDGF-208ENST00000482651 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
HDGF-208ENST00000482651 SRP68Q9UHB9 627 aaKnown RBP11.59□□□□□ -0.55
HDGF-208ENST00000482651 HEG1Q9ULI3 1381 aa11.58□□□□□ -0.56
HDGF-208ENST00000482651 BTBD11A6QL63 1104 aa11.58□□□□□ -0.56
HDGF-208ENST00000482651 GRIN3BO60391 1043 aa11.58□□□□□ -0.56
HDGF-208ENST00000482651 STARD3NLO95772 234 aa11.58□□□□□ -0.56
HDGF-208ENST00000482651 NEFMP07197 916 aa11.58□□□□□ -0.56
HDGF-208ENST00000482651 YBX3P16989 372 aaKnown RBP eCLIP11.58□□□□□ -0.564e-7■□□□□ 11.1
HDGF-208ENST00000482651 FMNL2Q96PY5 1086 aa11.58□□□□□ -0.56
HDGF-208ENST00000482651 TEX13AQ9BXU3 409 aaPredicted RBP11.58□□□□□ -0.56
HDGF-208ENST00000482651 ZBTB1Q9Y2K1 713 aa11.58□□□□□ -0.56
HDGF-208ENST00000482651 UTRNP46939 3433 aa11.57□□□□□ -0.56
HDGF-208ENST00000482651 MCM10Q7L590 875 aa11.57□□□□□ -0.56
HDGF-208ENST00000482651 PLEKHF1Q96S99 279 aa11.57□□□□□ -0.56
HDGF-208ENST00000482651 PNNQ9H307 717 aaKnown RBP11.57□□□□□ -0.56
HDGF-208ENST00000482651 PARP3Q9Y6F1 533 aa11.57□□□□□ -0.56
HDGF-208ENST00000482651 COL15A1P39059 1388 aa11.56□□□□□ -0.56
HDGF-208ENST00000482651 ZPR1O75312 459 aa11.56□□□□□ -0.56
HDGF-208ENST00000482651 C1QBPQ07021 282 aaKnown RBP11.56□□□□□ -0.56
HDGF-208ENST00000482651 C10orf71Q711Q0 1435 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms