RNA–Protein interactions for RNA: ENST00000482542.5

SFXN5-215, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 546 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-215ENST00000482542 COL15A1P39059 1388 aa18.86■□□□□ 0.61
SFXN5-215ENST00000482542 TOMM70O94826 608 aa18.86■□□□□ 0.61
SFXN5-215ENST00000482542 C9orf131Q5VYM1 1079 aa18.86■□□□□ 0.61
SFXN5-215ENST00000482542 SCN11AQ9UI33 1791 aa18.86■□□□□ 0.61
SFXN5-215ENST00000482542 CHRNA5P30532 468 aa18.85■□□□□ 0.61
SFXN5-215ENST00000482542 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
SFXN5-215ENST00000482542 NFIXQ14938 502 aa18.85■□□□□ 0.61
SFXN5-215ENST00000482542 TJP1Q07157 1748 aa18.84■□□□□ 0.61
SFXN5-215ENST00000482542 CANXP27824 592 aaKnown RBP18.84■□□□□ 0.61
SFXN5-215ENST00000482542 ZNF790Q6PG37 636 aa18.84■□□□□ 0.61
SFXN5-215ENST00000482542 IL17REQ8NFR9 667 aa18.84■□□□□ 0.61
SFXN5-215ENST00000482542 NUDCQ9Y266 331 aa18.84■□□□□ 0.61
SFXN5-215ENST00000482542 SERPINB2P05120 415 aa18.83■□□□□ 0.6
SFXN5-215ENST00000482542 EIF5P55010 431 aaKnown RBP18.83■□□□□ 0.6
SFXN5-215ENST00000482542 NPM2Q86SE8 214 aaKnown RBP18.83■□□□□ 0.6
SFXN5-215ENST00000482542 KCPQ6ZWJ8 1503 aa18.83■□□□□ 0.6
SFXN5-215ENST00000482542 KIAA1551Q9HCM1 1747 aa18.83■□□□□ 0.6
SFXN5-215ENST00000482542 ZNF496Q96IT1 587 aaPredicted RBP18.82■□□□□ 0.6
SFXN5-215ENST00000482542 N4BP2Q86UW6 1770 aaPredicted RBP18.82■□□□□ 0.6
SFXN5-215ENST00000482542 KDM2BQ8NHM5 1336 aa18.81■□□□□ 0.6
SFXN5-215ENST00000482542 APLP1P51693 650 aa18.81■□□□□ 0.6
SFXN5-215ENST00000482542 C16orf71Q8IYS4 520 aaPredicted RBP18.81■□□□□ 0.6
SFXN5-215ENST00000482542 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
SFXN5-215ENST00000482542 BCL2L12Q9HB09 334 aa18.81■□□□□ 0.6
SFXN5-215ENST00000482542 RNF181Q9P0P0 153 aa18.81■□□□□ 0.6
SFXN5-215ENST00000482542 PDZRN3Q9UPQ7 1066 aa18.81■□□□□ 0.6
SFXN5-215ENST00000482542 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
SFXN5-215ENST00000482542 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
SFXN5-215ENST00000482542 CEP350Q5VT06 3117 aa18.8■□□□□ 0.6
SFXN5-215ENST00000482542 ADAMTS7Q9UKP4 1686 aa18.79■□□□□ 0.6
SFXN5-215ENST00000482542 H0YIN7 160 aa18.79■□□□□ 0.6
SFXN5-215ENST00000482542 IL6STP40189 918 aaPredicted RBP18.79■□□□□ 0.6
SFXN5-215ENST00000482542 TTLL6Q8N841 843 aa18.79■□□□□ 0.6
SFXN5-215ENST00000482542 NMRK2Q9NPI5 230 aa18.79■□□□□ 0.6
SFXN5-215ENST00000482542 BTBD11A6QL63 1104 aa18.78■□□□□ 0.6
SFXN5-215ENST00000482542 PRKAR2BP31323 418 aa18.78■□□□□ 0.6
SFXN5-215ENST00000482542 RBM46Q8TBY0 533 aaKnown RBP18.78■□□□□ 0.6
SFXN5-215ENST00000482542 CEMIPQ8WUJ3 1361 aa18.78■□□□□ 0.6
SFXN5-215ENST00000482542 ZC3H4Q9UPT8 1303 aaKnown RBP18.77■□□□□ 0.6
SFXN5-215ENST00000482542 BICDL1Q6ZP65 573 aa18.77■□□□□ 0.6
SFXN5-215ENST00000482542 C2CD5Q86YS7 1000 aa18.77■□□□□ 0.6
SFXN5-215ENST00000482542 RTF1Q92541 710 aaKnown RBP18.77■□□□□ 0.6
SFXN5-215ENST00000482542 PHACTR3Q96KR7 559 aa18.77■□□□□ 0.6
SFXN5-215ENST00000482542 RSPH6AQ9H0K4 717 aa18.77■□□□□ 0.6
SFXN5-215ENST00000482542 U2AF1L5P0DN76 240 aaPredicted RBP18.76■□□□□ 0.59
SFXN5-215ENST00000482542 PDE6BP35913 854 aa18.76■□□□□ 0.59
SFXN5-215ENST00000482542 U2AF1Q01081 240 aaKnown RBP eCLIP18.76■□□□□ 0.59
SFXN5-215ENST00000482542 BRIP1Q9BX63 1249 aa18.76■□□□□ 0.59
SFXN5-215ENST00000482542 LMNB1P20700 586 aa18.75■□□□□ 0.59
SFXN5-215ENST00000482542 FSTL1Q12841 308 aa18.75■□□□□ 0.59
SFXN5-215ENST00000482542 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
SFXN5-215ENST00000482542 TBC1D9BQ66K14 1250 aa18.74■□□□□ 0.59
SFXN5-215ENST00000482542 SETDB2Q96T68 719 aa18.74■□□□□ 0.59
SFXN5-215ENST00000482542 TBC1D2BQ9UPU7 963 aa18.74■□□□□ 0.59
SFXN5-215ENST00000482542 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
SFXN5-215ENST00000482542 HTATSF1O43719 755 aaKnown RBP18.73■□□□□ 0.59
SFXN5-215ENST00000482542 A1BGP04217 495 aa18.73■□□□□ 0.59
SFXN5-215ENST00000482542 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
SFXN5-215ENST00000482542 BRCA1P38398 1863 aaKnown RBP18.73■□□□□ 0.59
SFXN5-215ENST00000482542 ARFGEF1Q9Y6D6 1849 aa18.72■□□□□ 0.59
SFXN5-215ENST00000482542 RRAGCQ9HB90 399 aa18.72■□□□□ 0.59
SFXN5-215ENST00000482542 NPHP1O15259 732 aa18.71■□□□□ 0.59
SFXN5-215ENST00000482542 SNRPA1P09661 255 aaKnown RBP18.71■□□□□ 0.59
SFXN5-215ENST00000482542 IFFO2Q5TF58 517 aa18.71■□□□□ 0.59
SFXN5-215ENST00000482542 ZNF622Q969S3 477 aaKnown RBP eCLIP18.71■□□□□ 0.59
SFXN5-215ENST00000482542 GLTPD2A6NH11 291 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 KCNQ3O43525 872 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 NEFMP07197 916 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 RASSF7Q02833 373 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 PRR5LQ6MZQ0 368 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 CLEC4GQ6UXB4 293 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 DZIP3Q86Y13 1208 aaKnown RBP18.7■□□□□ 0.58
SFXN5-215ENST00000482542 USP16Q9Y5T5 823 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 UBR2Q8IWV8 1755 aa18.7■□□□□ 0.58
SFXN5-215ENST00000482542 ST5P78524 1137 aa18.69■□□□□ 0.58
SFXN5-215ENST00000482542 CNBD1Q8NA66 436 aa18.69■□□□□ 0.58
SFXN5-215ENST00000482542 ZNF652Q9Y2D9 606 aa18.69■□□□□ 0.58
SFXN5-215ENST00000482542 NRXN2Q9P2S2 1712 aa18.69■□□□□ 0.58
SFXN5-215ENST00000482542 RGL2O15211 777 aa18.68■□□□□ 0.58
SFXN5-215ENST00000482542 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
SFXN5-215ENST00000482542 MCM10Q7L590 875 aa18.68■□□□□ 0.58
SFXN5-215ENST00000482542 DNAJC5GQ8N7S2 189 aa18.68■□□□□ 0.58
SFXN5-215ENST00000482542 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
SFXN5-215ENST00000482542 CNKSR1Q969H4 720 aa18.68■□□□□ 0.58
SFXN5-215ENST00000482542 TAF7Q15545 349 aaPredicted RBP18.67■□□□□ 0.58
SFXN5-215ENST00000482542 DPY19L2Q6NUT2 758 aa18.67■□□□□ 0.58
SFXN5-215ENST00000482542 NFKBIEO00221 500 aa18.66■□□□□ 0.58
SFXN5-215ENST00000482542 SOGA3Q5TF21 947 aa18.66■□□□□ 0.58
SFXN5-215ENST00000482542 STYK1Q6J9G0 422 aa18.66■□□□□ 0.58
SFXN5-215ENST00000482542 C21orf2O43822 256 aa18.65■□□□□ 0.58
SFXN5-215ENST00000482542 PNISRQ8TF01 805 aaKnown RBP18.65■□□□□ 0.58
SFXN5-215ENST00000482542 MASTLQ96GX5 879 aa18.65■□□□□ 0.58
SFXN5-215ENST00000482542 SRGNP10124 158 aa18.64■□□□□ 0.57
SFXN5-215ENST00000482542 PRELPP51888 382 aa18.64■□□□□ 0.57
SFXN5-215ENST00000482542 NBPF5PQ86XG9 351 aaPredicted RBP18.64■□□□□ 0.57
SFXN5-215ENST00000482542 PNNQ9H307 717 aaKnown RBP18.64■□□□□ 0.57
SFXN5-215ENST00000482542 ERFEQ4G0M1 354 aa18.63■□□□□ 0.57
SFXN5-215ENST00000482542 TPTE2Q6XPS3 522 aa18.63■□□□□ 0.57
SFXN5-215ENST00000482542 CCDC24Q8N4L8 307 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms