RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PI4KAP1Q8N8J0 262 aa15.18■□□□□ 0.02
VPS52-218ENST00000482399 RUFY2Q8WXA3 655 aa15.18■□□□□ 0.02
VPS52-218ENST00000482399 TNMDQ9H2S6 317 aa15.18■□□□□ 0.02
VPS52-218ENST00000482399 MAP3K19Q56UN5 1328 aa15.18■□□□□ 0.02
VPS52-218ENST00000482399 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
VPS52-218ENST00000482399 TTC21BQ7Z4L5 1316 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 PNPLA6Q8IY17 1366 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 RAB11FIP3O75154 756 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 F13A1P00488 732 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 PTGS1P23219 599 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 AACSQ86V21 672 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 GPATCH3Q96I76 525 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 SNX14Q9Y5W7 946 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 MROH2AA6NES4 1674 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 PPRC1Q5VV67 1664 aaKnown RBP15.17■□□□□ 0.02
VPS52-218ENST00000482399 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 FSD1Q9BTV5 496 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 NUP62CLQ9H1M0 184 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 BOLA2Q9H3K6 86 aa15.17■□□□□ 0.02
VPS52-218ENST00000482399 ADGRB1O14514 1584 aa15.16■□□□□ 0.02
VPS52-218ENST00000482399 NBPF7P0C2Y1 421 aaPredicted RBP15.16■□□□□ 0.02
VPS52-218ENST00000482399 HDGFP51858 240 aaKnown RBP15.16■□□□□ 0.02
VPS52-218ENST00000482399 TPD52L1Q16890 204 aaPredicted RBP15.16■□□□□ 0.02
VPS52-218ENST00000482399 FILIP1Q7Z7B0 1213 aa15.16■□□□□ 0.02
VPS52-218ENST00000482399 INTS4Q96HW7 963 aaKnown RBP15.16■□□□□ 0.02
VPS52-218ENST00000482399 GOLGA6L19H0YKK7 550 aa15.16■□□□□ 0.02
VPS52-218ENST00000482399 KDM4AO75164 1064 aa15.16■□□□□ 0.02
VPS52-218ENST00000482399 LARGE1O95461 756 aa15.16■□□□□ 0.02
VPS52-218ENST00000482399 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
VPS52-218ENST00000482399 EYA1Q99502 592 aa15.16■□□□□ 0.02
VPS52-218ENST00000482399 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.16■□□□□ 0.02
VPS52-218ENST00000482399 V9GYY5 206 aaPredicted RBP15.16■□□□□ 0.02
VPS52-218ENST00000482399 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 BECN2A8MW95 431 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 KRT85P78386 507 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 CCDC186Q7Z3E2 898 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 KIF1BPQ96EK5 621 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 PIBF1Q8WXW3 757 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 PYCARDQ9ULZ3 195 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 ADGRB3O60242 1522 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 ANAPC15P60006 121 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 FMNL2Q96PY5 1086 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 CFAP74Q9C0B2 1584 aa15.15■□□□□ 0.02
VPS52-218ENST00000482399 U2AF2P26368 475 aaKnown RBP eCLIP15.14■□□□□ 0.011e-8■■■□□ 17.8
VPS52-218ENST00000482399 MAP3K11Q16584 847 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 ABTB2Q8N961 1025 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 MYRIPQ8NFW9 859 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 USP44Q9H0E7 712 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 PIK3R4Q99570 1358 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 LETM1O95202 739 aaPredicted RBP15.14■□□□□ 0.01
VPS52-218ENST00000482399 RUFY3Q7L099 469 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 SPATA32Q96LK8 384 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 LRMPQ12912 555 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 CUL4AQ13619 759 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 ADCK5Q3MIX3 580 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 LRRC2Q9BYS8 371 aa15.14■□□□□ 0.01
VPS52-218ENST00000482399 MED14O60244 1454 aa15.13■□□□□ 0.01
VPS52-218ENST00000482399 RIOK3O14730 519 aaKnown RBP15.13■□□□□ 0.01
VPS52-218ENST00000482399 CCDC94Q9BW85 323 aaPredicted RBP15.13■□□□□ 0.01
VPS52-218ENST00000482399 TRMT1Q9NXH9 659 aaKnown RBP15.13■□□□□ 0.01
VPS52-218ENST00000482399 CHPF2Q9P2E5 772 aa15.13■□□□□ 0.01
VPS52-218ENST00000482399 ATP10DQ9P241 1426 aa15.13■□□□□ 0.01
VPS52-218ENST00000482399 G3BP1Q13283 466 aaKnown RBP eCLIP15.13■□□□□ 0.01
VPS52-218ENST00000482399 HSPA4P34932 840 aa15.12■□□□□ 0.01
VPS52-218ENST00000482399 PTH1RQ03431 593 aa15.12■□□□□ 0.01
VPS52-218ENST00000482399 BCL2L12Q9HB09 334 aa15.12■□□□□ 0.01
VPS52-218ENST00000482399 COL3A1P02461 1466 aaPredicted RBP15.12■□□□□ 0.01
VPS52-218ENST00000482399 SGSM2O43147 1006 aa15.12■□□□□ 0.01
VPS52-218ENST00000482399 TERF1P54274 439 aa15.12■□□□□ 0.01
VPS52-218ENST00000482399 ANO6Q4KMQ2 910 aa15.12■□□□□ 0.01
VPS52-218ENST00000482399 NRXN1Q9ULB1 1477 aa15.11■□□□□ 0.01
VPS52-218ENST00000482399 SOS1Q07889 1333 aaPredicted RBP15.11■□□□□ 0.01
VPS52-218ENST00000482399 YEATS2Q9ULM3 1422 aa15.11■□□□□ 0.01
VPS52-218ENST00000482399 GUCY1B3Q02153 619 aa15.11■□□□□ 0.01
VPS52-218ENST00000482399 BLOC1S2Q6QNY1 142 aa15.11■□□□□ 0.01
VPS52-218ENST00000482399 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
VPS52-218ENST00000482399 DNAJC2Q99543 621 aaKnown RBP15.11■□□□□ 0.01
VPS52-218ENST00000482399 PRIMPOLQ96LW4 560 aa15.11■□□□□ 0.01
VPS52-218ENST00000482399 NDUFB9Q9Y6M9 179 aa15.11■□□□□ 0.01
VPS52-218ENST00000482399 GLRX3O76003 335 aaKnown RBP15.1■□□□□ 0.01
VPS52-218ENST00000482399 MAPK8IP2Q13387 824 aaPredicted RBP15.1■□□□□ 0.01
VPS52-218ENST00000482399 A0A087WWV3 80 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 TNNT1P13805 278 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 LIG1P18858 919 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 FAM227BQ96M60 508 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 DNAJC25Q9H1X3 360 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 OSBPL3Q9H4L5 887 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 ABCC3O15438 1527 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 CWF19L2Q2TBE0 894 aaKnown RBP15.1■□□□□ 0.01
VPS52-218ENST00000482399 UVSSAQ2YD98 709 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 NRBP1Q9UHY1 535 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 EDC4Q6P2E9 1401 aaKnown RBP15.1■□□□□ 0.01
VPS52-218ENST00000482399 KIAA1210Q9ULL0 1709 aa15.1■□□□□ 0.01
VPS52-218ENST00000482399 KLHDC4Q8TBB5 520 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 DNAAF4Q8WXU2 420 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 RBM8AQ9Y5S9 174 aaKnown RBP15.09■□□□□ 0.01
VPS52-218ENST00000482399 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 METP08581 1390 aa15.09■□□□□ 0.01
VPS52-218ENST00000482399 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms