RNA–Protein interactions for RNA: ENST00000482289.5

SFXN5-214, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 895 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-214ENST00000482289 TAF7Q15545 349 aaPredicted RBP26.67■■□□□ 1.86
SFXN5-214ENST00000482289 COL15A1P39059 1388 aa26.67■■□□□ 1.86
SFXN5-214ENST00000482289 KCNQ3O43525 872 aa26.65■■□□□ 1.86
SFXN5-214ENST00000482289 ZPR1O75312 459 aa26.65■■□□□ 1.86
SFXN5-214ENST00000482289 GPR162Q16538 588 aa26.65■■□□□ 1.86
SFXN5-214ENST00000482289 PNISRQ8TF01 805 aaKnown RBP26.65■■□□□ 1.86
SFXN5-214ENST00000482289 SRP68Q9UHB9 627 aaKnown RBP26.64■■□□□ 1.86
SFXN5-214ENST00000482289 CANXP27824 592 aaKnown RBP26.63■■□□□ 1.85
SFXN5-214ENST00000482289 NARFQ9UHQ1 456 aa26.62■■□□□ 1.85
SFXN5-214ENST00000482289 PARP3Q9Y6F1 533 aa26.62■■□□□ 1.85
SFXN5-214ENST00000482289 KIF13BQ9NQT8 1826 aa26.61■■□□□ 1.85
SFXN5-214ENST00000482289 A0A087WZG4 1122 aa26.61■■□□□ 1.85
SFXN5-214ENST00000482289 SNRPA1P09661 255 aaKnown RBP26.61■■□□□ 1.85
SFXN5-214ENST00000482289 EIF5P55010 431 aaKnown RBP26.6■■□□□ 1.85
SFXN5-214ENST00000482289 LMOD3Q0VAK6 560 aa26.6■■□□□ 1.85
SFXN5-214ENST00000482289 FKBP8Q14318 412 aa26.6■■□□□ 1.85
SFXN5-214ENST00000482289 USPL1Q5W0Q7 1092 aa26.6■■□□□ 1.85
SFXN5-214ENST00000482289 PELP1Q8IZL8 1130 aaKnown RBP26.6■■□□□ 1.85
SFXN5-214ENST00000482289 KDM3BQ7LBC6 1761 aa26.6■■□□□ 1.85
SFXN5-214ENST00000482289 YY1P25490 414 aa26.59■■□□□ 1.85
SFXN5-214ENST00000482289 IL6STP40189 918 aaPredicted RBP26.59■■□□□ 1.85
SFXN5-214ENST00000482289 RIPK4P57078 832 aa26.59■■□□□ 1.85
SFXN5-214ENST00000482289 TMPOP42166 694 aaKnown RBP26.58■■□□□ 1.85
SFXN5-214ENST00000482289 NPM2Q86SE8 214 aaKnown RBP26.58■■□□□ 1.85
SFXN5-214ENST00000482289 RUNDC1Q96C34 613 aa26.58■■□□□ 1.85
SFXN5-214ENST00000482289 C10orf71Q711Q0 1435 aa26.57■■□□□ 1.84
SFXN5-214ENST00000482289 CHD4Q14839 1912 aa26.57■■□□□ 1.84
SFXN5-214ENST00000482289 GRIN3BO60391 1043 aa26.56■■□□□ 1.84
SFXN5-214ENST00000482289 A1BGP04217 495 aa26.56■■□□□ 1.84
SFXN5-214ENST00000482289 THUMPD2Q9BTF0 503 aaKnown RBP26.56■■□□□ 1.84
SFXN5-214ENST00000482289 ADAMTS8Q9UP79 889 aa26.56■■□□□ 1.84
SFXN5-214ENST00000482289 USP16Q9Y5T5 823 aa26.56■■□□□ 1.84
SFXN5-214ENST00000482289 TM4SF1P30408 202 aa26.55■■□□□ 1.84
SFXN5-214ENST00000482289 CCDC146Q8IYE0 955 aa26.55■■□□□ 1.84
SFXN5-214ENST00000482289 MIS18AQ9NYP9 233 aa26.55■■□□□ 1.84
SFXN5-214ENST00000482289 LAMB4A4D0S4 1761 aa26.54■■□□□ 1.84
SFXN5-214ENST00000482289 TGFB2P61812 414 aa26.54■■□□□ 1.84
SFXN5-214ENST00000482289 DDR1Q08345 913 aa26.53■■□□□ 1.84
SFXN5-214ENST00000482289 ZNF330Q9Y3S2 320 aaPredicted RBP26.53■■□□□ 1.84
SFXN5-214ENST00000482289 SCN7AQ01118 1682 aa26.53■■□□□ 1.84
SFXN5-214ENST00000482289 PRAMEF22A3QJZ6 481 aa26.52■■□□□ 1.84
SFXN5-214ENST00000482289 POLRMTO00411 1230 aaKnown RBP26.52■■□□□ 1.84
SFXN5-214ENST00000482289 YBX3P16989 372 aaKnown RBP eCLIP26.52■■□□□ 1.84
SFXN5-214ENST00000482289 BABAM1Q9NWV8 329 aa26.52■■□□□ 1.84
SFXN5-214ENST00000482289 KIAA1551Q9HCM1 1747 aa26.51■■□□□ 1.83
SFXN5-214ENST00000482289 PXDNLA1KZ92 1463 aa26.51■■□□□ 1.83
SFXN5-214ENST00000482289 BCL2L12Q9HB09 334 aa26.51■■□□□ 1.83
SFXN5-214ENST00000482289 EIF4A1P60842 406 aaKnown RBP26.5■■□□□ 1.83
SFXN5-214ENST00000482289 NFIXQ14938 502 aa26.5■■□□□ 1.83
SFXN5-214ENST00000482289 NEUROD2Q15784 382 aa26.49■■□□□ 1.83
SFXN5-214ENST00000482289 TSPYL4Q9UJ04 414 aa26.49■■□□□ 1.83
SFXN5-214ENST00000482289 RRP7AQ9Y3A4 280 aaKnown RBP26.49■■□□□ 1.83
SFXN5-214ENST00000482289 GIGYF1O75420 1035 aaPredicted RBP26.48■■□□□ 1.83
SFXN5-214ENST00000482289 TBC1D2BQ9UPU7 963 aa26.48■■□□□ 1.83
SFXN5-214ENST00000482289 N4BP2Q86UW6 1770 aaPredicted RBP26.48■■□□□ 1.83
SFXN5-214ENST00000482289 ANP32CO43423 234 aa26.47■■□□□ 1.83
SFXN5-214ENST00000482289 DZIP3Q86Y13 1208 aaKnown RBP26.47■■□□□ 1.83
SFXN5-214ENST00000482289 BCORQ6W2J9 1755 aa26.47■■□□□ 1.83
SFXN5-214ENST00000482289 NRXN2Q9P2S2 1712 aa26.47■■□□□ 1.83
SFXN5-214ENST00000482289 AFDNP55196 1824 aaKnown RBP26.46■■□□□ 1.83
SFXN5-214ENST00000482289 A0A0G2JLW4 131 aa26.44■■□□□ 1.82
SFXN5-214ENST00000482289 CAMTA2O94983 1202 aa26.44■■□□□ 1.82
SFXN5-214ENST00000482289 SERPINB2P05120 415 aa26.44■■□□□ 1.82
SFXN5-214ENST00000482289 PIP4K2AP48426 406 aaPredicted RBP26.44■■□□□ 1.82
SFXN5-214ENST00000482289 TRIM35Q9UPQ4 493 aa26.44■■□□□ 1.82
SFXN5-214ENST00000482289 NBPF26B4DH59 902 aa26.43■■□□□ 1.82
SFXN5-214ENST00000482289 DPEP1P16444 411 aa26.43■■□□□ 1.82
SFXN5-214ENST00000482289 NBPF10Q6P3W6 841 aaKnown RBP26.43■■□□□ 1.82
SFXN5-214ENST00000482289 NBPF15Q8N660 670 aa26.43■■□□□ 1.82
SFXN5-214ENST00000482289 UTRNP46939 3433 aa26.42■■□□□ 1.82
SFXN5-214ENST00000482289 RGL2O15211 777 aa26.42■■□□□ 1.82
SFXN5-214ENST00000482289 TBC1D9BQ66K14 1250 aa26.42■■□□□ 1.82
SFXN5-214ENST00000482289 BICDL1Q6ZP65 573 aa26.42■■□□□ 1.82
SFXN5-214ENST00000482289 BRCA1P38398 1863 aaKnown RBP26.42■■□□□ 1.82
SFXN5-214ENST00000482289 CLEC4GQ6UXB4 293 aa26.41■■□□□ 1.82
SFXN5-214ENST00000482289 WWC3Q9ULE0 1092 aa26.41■■□□□ 1.82
SFXN5-214ENST00000482289 ZNF652Q9Y2D9 606 aa26.41■■□□□ 1.82
SFXN5-214ENST00000482289 CARMIL3Q8ND23 1372 aa26.41■■□□□ 1.82
SFXN5-214ENST00000482289 ERBB4Q15303 1308 aa26.4■■□□□ 1.82
SFXN5-214ENST00000482289 GOLGB1Q14789 3259 aaKnown RBP26.38■■□□□ 1.81
SFXN5-214ENST00000482289 CHL1O00533 1208 aa26.38■■□□□ 1.81
SFXN5-214ENST00000482289 APAF1O14727 1248 aa26.38■■□□□ 1.81
SFXN5-214ENST00000482289 SETDB2Q96T68 719 aa26.38■■□□□ 1.81
SFXN5-214ENST00000482289 PIM2Q9P1W9 311 aa26.38■■□□□ 1.81
SFXN5-214ENST00000482289 BCS1LQ9Y276 419 aa26.38■■□□□ 1.81
SFXN5-214ENST00000482289 KCNA3P22001 575 aa26.37■■□□□ 1.81
SFXN5-214ENST00000482289 CCDC184Q52MB2 194 aa26.37■■□□□ 1.81
SFXN5-214ENST00000482289 CALD1Q05682 793 aaKnown RBP26.35■■□□□ 1.81
SFXN5-214ENST00000482289 MRS2Q9HD23 443 aa26.35■■□□□ 1.81
SFXN5-214ENST00000482289 LAS1LQ9Y4W2 734 aaKnown RBP26.35■■□□□ 1.81
SFXN5-214ENST00000482289 ARFGEF1Q9Y6D6 1849 aa26.35■■□□□ 1.81
SFXN5-214ENST00000482289 CHRNA5P30532 468 aa26.33■■□□□ 1.81
SFXN5-214ENST00000482289 ZNF784Q8NCA9 323 aaPredicted RBP26.33■■□□□ 1.81
SFXN5-214ENST00000482289 CFAP44Q96MT7 982 aa26.33■■□□□ 1.81
SFXN5-214ENST00000482289 PDZRN3Q9UPQ7 1066 aa26.33■■□□□ 1.81
SFXN5-214ENST00000482289 DLEC1Q9Y238 1755 aa26.33■■□□□ 1.8
SFXN5-214ENST00000482289 MYL6BP14649 208 aa26.32■■□□□ 1.8
SFXN5-214ENST00000482289 DALRD3Q5D0E6 543 aaKnown RBP26.32■■□□□ 1.8
SFXN5-214ENST00000482289 PRR5LQ6MZQ0 368 aa26.32■■□□□ 1.8
SFXN5-214ENST00000482289 CNBD1Q8NA66 436 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms