RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 CCDC171Q6TFL3 1326 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 ZNF165P49910 485 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 TMCO3Q6UWJ1 677 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 NFXL1Q6ZNB6 911 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 CALCOCO1Q9P1Z2 691 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 SFPQP23246 707 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDX39B-219ENST00000481456 IDI1Q13907 227 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 JMYQ8N9B5 988 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 POLKQ9UBT6 870 aa13.56□□□□□ -0.24
DDX39B-219ENST00000481456 IPO7O95373 1038 aaKnown RBP13.55□□□□□ -0.24
DDX39B-219ENST00000481456 TMEM63CQ9P1W3 806 aa13.55□□□□□ -0.24
DDX39B-219ENST00000481456 GSDMDP57764 484 aa13.55□□□□□ -0.24
DDX39B-219ENST00000481456 ERVK-7P63135 1459 aa13.55□□□□□ -0.24
DDX39B-219ENST00000481456 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
DDX39B-219ENST00000481456 STX1AQ16623 288 aa13.55□□□□□ -0.24
DDX39B-219ENST00000481456 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
DDX39B-219ENST00000481456 SBNO2Q9Y2G9 1366 aa13.55□□□□□ -0.24
DDX39B-219ENST00000481456 APPP05067 770 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 WASHC4Q2M389 1173 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 SIL1Q9H173 461 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 ZNF518AQ6AHZ1 1483 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
DDX39B-219ENST00000481456 CCDC186Q7Z3E2 898 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 DDX11Q96FC9 970 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 PLXNC1O60486 1568 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 FBLN1P23142 703 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 KRT222Q8N1A0 295 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 NOC3LQ8WTT2 800 aaKnown RBP13.54□□□□□ -0.24
DDX39B-219ENST00000481456 EVI5LQ96CN4 794 aa13.54□□□□□ -0.24
DDX39B-219ENST00000481456 CHMLP26374 656 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 ATP8B2P98198 1209 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 FEZ1Q99689 392 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 TSPYL1Q9H0U9 437 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 ANO6Q4KMQ2 910 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 DDX54Q8TDD1 881 aaKnown RBP13.53□□□□□ -0.24
DDX39B-219ENST00000481456 OTUD7AQ8TE49 926 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-219ENST00000481456 MSH6P52701 1360 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 RAPGEF3O95398 923 aa13.53□□□□□ -0.24
DDX39B-219ENST00000481456 DNM1Q05193 864 aaKnown RBP13.53□□□□□ -0.24
DDX39B-219ENST00000481456 GSPT1P15170 499 aaKnown RBP13.53□□□□□ -0.24
DDX39B-219ENST00000481456 LRRIQ1Q96JM4 1722 aa13.52□□□□□ -0.24
DDX39B-219ENST00000481456 TAF7Q15545 349 aaPredicted RBP13.52□□□□□ -0.24
DDX39B-219ENST00000481456 ECHDC1Q9NTX5 307 aa13.52□□□□□ -0.24
DDX39B-219ENST00000481456 TRMT1Q9NXH9 659 aaKnown RBP13.52□□□□□ -0.24
DDX39B-219ENST00000481456 TFIP11Q9UBB9 837 aaKnown RBP13.52□□□□□ -0.24
DDX39B-219ENST00000481456 ABCC4O15439 1325 aa13.52□□□□□ -0.25
DDX39B-219ENST00000481456 SAMD9LQ8IVG5 1584 aa13.52□□□□□ -0.25
DDX39B-219ENST00000481456 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
DDX39B-219ENST00000481456 ABTB2Q8N961 1025 aa13.52□□□□□ -0.25
DDX39B-219ENST00000481456 CROCC2H7BZ55 1655 aa13.52□□□□□ -0.25
DDX39B-219ENST00000481456 ERLIN1O75477 346 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 RHPN1Q8TCX5 695 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 OGFRQ9NZT2 677 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 DACH1Q9UI36 760 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 EIF3JO75822 258 aaKnown RBP13.51□□□□□ -0.25
DDX39B-219ENST00000481456 BRD1O95696 1058 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 PIK3R4Q99570 1358 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 AK2P54819 239 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 TYRO3Q06418 890 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 BMS1Q14692 1282 aaKnown RBP13.51□□□□□ -0.25
DDX39B-219ENST00000481456 PLA2R1Q13018 1463 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 SMARCE1Q969G3 411 aa13.51□□□□□ -0.25
DDX39B-219ENST00000481456 ZSCAN12O43309 604 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 CD2BP2O95400 341 aaKnown RBP13.5□□□□□ -0.25
DDX39B-219ENST00000481456 FAM177A1Q8N128 213 aaPredicted RBP13.5□□□□□ -0.25
DDX39B-219ENST00000481456 DNAAF4Q8WXU2 420 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 NOL10Q9BSC4 688 aaKnown RBP13.5□□□□□ -0.25
DDX39B-219ENST00000481456 PTGS1P23219 599 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 PPIP5K1Q6PFW1 1433 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 ERBB4Q15303 1308 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 PSME1Q06323 249 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
DDX39B-219ENST00000481456 FILIP1LQ4L180 1135 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 TRPM2O94759 1503 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 ADCY10Q96PN6 1610 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 KIF20AO95235 890 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 ATP10AO60312 1499 aa13.5□□□□□ -0.25
DDX39B-219ENST00000481456 RIMS2Q9UQ26 1411 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 SYT1P21579 422 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 DACT1Q9NYF0 836 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 ABCC1P33527 1531 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 ERICH2A1L162 156 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 BTBD11A6QL63 1104 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 CLSTN1O94985 981 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 HMGB1P09429 215 aaKnown RBP13.49□□□□□ -0.25
DDX39B-219ENST00000481456 CD109Q6YHK3 1445 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 HMG20BQ9P0W2 317 aa13.49□□□□□ -0.25
DDX39B-219ENST00000481456 PKP1Q13835 747 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 CFAP100Q494V2 611 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 CCDC150Q8NCX0 1101 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 PLEKHF1Q96S99 279 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 BOLA2Q9H3K6 86 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 ZSCAN16Q9H4T2 348 aaPredicted RBP13.48□□□□□ -0.25
DDX39B-219ENST00000481456 FAM177BA6PVY3 158 aa13.48□□□□□ -0.25
DDX39B-219ENST00000481456 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms