RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TMCO3Q6UWJ1 677 aa12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 CCDC97Q96F63 343 aaPredicted RBP12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 FAM163BP0C2L3 166 aa12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 TRIM74Q86UV6 250 aa12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 TRIM73Q86UV7 250 aa12.19□□□□□ -0.46
PRPF4B-206ENST00000481109 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 OAS2P29728 719 aaKnown RBP12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 RPS6KA3P51812 740 aa12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 RBBP5Q15291 538 aaKnown RBP12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 ZRSR2Q15696 482 aaKnown RBP12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 FILIP1Q7Z7B0 1213 aa12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 ARMC2Q8NEN0 867 aa12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 MCM8Q9UJA3 840 aa12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 DDR1Q08345 913 aa12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 DRAXINQ8NBI3 349 aaPredicted RBP12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 UTP14AQ9BVJ6 771 aaKnown RBP12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 ADAM21Q9UKJ8 722 aa12.18□□□□□ -0.46
PRPF4B-206ENST00000481109 PLB1Q6P1J6 1458 aa12.17□□□□□ -0.46
PRPF4B-206ENST00000481109 AATKQ6ZMQ8 1374 aa12.17□□□□□ -0.46
PRPF4B-206ENST00000481109 PIK3R5Q8WYR1 880 aa12.17□□□□□ -0.46
PRPF4B-206ENST00000481109 IFT57Q9NWB7 429 aa12.17□□□□□ -0.46
PRPF4B-206ENST00000481109 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
PRPF4B-206ENST00000481109 PCDHB15Q9Y5E8 787 aa12.17□□□□□ -0.46
PRPF4B-206ENST00000481109 IL16Q14005 1332 aa12.17□□□□□ -0.46
PRPF4B-206ENST00000481109 U2SURPO15042 1029 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 HNRNPH1P31943 449 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 LMAN1P49257 510 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 SF3A1Q15459 793 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 NYAP1Q6ZVC0 841 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 L2HGDHQ9H9P8 463 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 FAM135AQ9P2D6 1515 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 RTN2O75298 545 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 ANKRD45Q5TZF3 282 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 SRRTQ9BXP5 876 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 SLC24A3Q9HC58 644 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 CHCHD3Q9NX63 227 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 ATP10AO60312 1499 aa12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 TCOF1Q13428 1488 aaKnown RBP12.16□□□□□ -0.46
PRPF4B-206ENST00000481109 BCAR3O75815 825 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 PRPHP41219 470 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 SMC1AQ14683 1233 aaKnown RBP12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 TBC1D25Q3MII6 688 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 KCNB2Q92953 911 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 MMTAG2Q9BU76 263 aaKnown RBP12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 NUB1Q9Y5A7 615 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 AK9Q5TCS8 1911 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 IQGAP2Q13576 1575 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 SNUPNO95149 360 aaKnown RBP12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 AMOTQ4VCS5 1084 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 BAG1Q99933 345 aaPredicted RBP12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 ZDHHC9Q9Y397 364 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 PCDHGA4Q9Y5G9 962 aa12.15□□□□□ -0.46
PRPF4B-206ENST00000481109 GPTP24298 496 aa12.14□□□□□ -0.47
PRPF4B-206ENST00000481109 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
PRPF4B-206ENST00000481109 CTCFLQ8NI51 663 aaPredicted RBP12.14□□□□□ -0.47
PRPF4B-206ENST00000481109 PDRG1Q9NUG6 133 aa12.14□□□□□ -0.47
PRPF4B-206ENST00000481109 RPUSD2Q8IZ73 545 aaKnown RBP12.14□□□□□ -0.47
PRPF4B-206ENST00000481109 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
PRPF4B-206ENST00000481109 PBRM1Q86U86 1689 aa12.14□□□□□ -0.47
PRPF4B-206ENST00000481109 ERLIN2O94905 339 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 IMPDH2P12268 514 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 POLD1P28340 1107 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 PDIA5Q14554 519 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 LRRC31Q6UY01 552 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 THOC1Q96FV9 657 aaKnown RBP12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 PTGS1P23219 599 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 MYBPC2Q14324 1141 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 KCNV1Q6PIU1 500 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 CADPS2Q86UW7 1296 aa12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.13□□□□□ -0.47
PRPF4B-206ENST00000481109 TUBB4AP04350 444 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 SKILP12757 684 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 NF2P35240 595 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 PTPN14Q15678 1187 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 MICALL1Q8N3F8 863 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 ZNF232Q9UNY5 417 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 NEMFO60524 1076 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 HCLS1P14317 486 aaPredicted RBP12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 PECAM1P16284 738 aaPredicted RBP12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 CCNHP51946 323 aaPredicted RBP12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 PSMD2Q13200 908 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 PKP1Q13835 747 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 NCAPG2Q86XI2 1143 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 ANKRD18AQ8IVF6 992 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 MAF1Q9H063 256 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 PHF8Q9UPP1 1060 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
PRPF4B-206ENST00000481109 ANKRD50Q9ULJ7 1429 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms