RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 IGFBP4P22692 258 aa8.83□□□□□ -1
UPF3A-205ENST00000479712 ZNF211Q13398 564 aaPredicted RBP8.83□□□□□ -1
UPF3A-205ENST00000479712 ESCO1Q5FWF5 840 aa8.83□□□□□ -1
UPF3A-205ENST00000479712 SPRYD7Q5W111 196 aa8.83□□□□□ -1
UPF3A-205ENST00000479712 TNS4Q8IZW8 715 aa8.83□□□□□ -1
UPF3A-205ENST00000479712 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
UPF3A-205ENST00000479712 EMILIN1Q9Y6C2 1016 aa8.83□□□□□ -1
UPF3A-205ENST00000479712 RIMS1Q86UR5 1692 aaKnown RBP8.83□□□□□ -1
UPF3A-205ENST00000479712 GLI2P10070 1586 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 H3BRB1 525 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 FOXO3O43524 673 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 ALDH1A1P00352 501 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 HSPA1LP34931 641 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 RBM25P49756 843 aaKnown RBP8.82□□□□□ -1
UPF3A-205ENST00000479712 GAS2L2Q8NHY3 880 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 GTF3C2Q8WUA4 911 aaPredicted RBP8.82□□□□□ -1
UPF3A-205ENST00000479712 SCG3Q8WXD2 468 aaKnown RBP8.82□□□□□ -1
UPF3A-205ENST00000479712 ZNF775Q96BV0 537 aaPredicted RBP8.82□□□□□ -1
UPF3A-205ENST00000479712 TUT1Q9H6E5 874 aaKnown RBP8.82□□□□□ -1
UPF3A-205ENST00000479712 ANO2Q9NQ90 1003 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 SEPT3Q9UH03 358 aa8.82□□□□□ -1
UPF3A-205ENST00000479712 ADD1P35611 737 aaKnown RBP8.81□□□□□ -1
UPF3A-205ENST00000479712 NNTQ13423 1086 aa8.81□□□□□ -1
UPF3A-205ENST00000479712 ZNF697Q5TEC3 545 aa8.81□□□□□ -1
UPF3A-205ENST00000479712 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
UPF3A-205ENST00000479712 WASF2Q9Y6W5 498 aa8.81□□□□□ -1
UPF3A-205ENST00000479712 LTBP4Q8N2S1 1624 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 ICMTO60725 284 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 EPHA4P54764 986 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 FOXC1Q12948 553 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 CAPN12Q6ZSI9 719 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 GLYCTKQ8IVS8 523 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 COL26A1Q96A83 441 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 ZNF428Q96B54 188 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 SLC4A9Q96Q91 983 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 TSPAN10Q9H1Z9 355 aaPredicted RBP8.8□□□□□ -1
UPF3A-205ENST00000479712 ARHGEF10LQ9HCE6 1279 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 AMOTL2Q9Y2J4 779 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 TEX14Q8IWB6 1497 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 SETD1AO15047 1707 aaKnown RBP8.8□□□□□ -1
UPF3A-205ENST00000479712 MAP3K4Q9Y6R4 1608 aa8.8□□□□□ -1
UPF3A-205ENST00000479712 FGD5Q6ZNL6 1462 aa8.79□□□□□ -1
UPF3A-205ENST00000479712 ATAD2Q6PL18 1390 aa8.79□□□□□ -1
UPF3A-205ENST00000479712 MARSP56192 900 aaKnown RBP8.79□□□□□ -1
UPF3A-205ENST00000479712 ZNF598Q86UK7 904 aaKnown RBP8.79□□□□□ -1
UPF3A-205ENST00000479712 VTI1AQ96AJ9 217 aa8.79□□□□□ -1
UPF3A-205ENST00000479712 PDZRN3Q9UPQ7 1066 aa8.79□□□□□ -1
UPF3A-205ENST00000479712 DNMT3AQ9Y6K1 912 aaPredicted RBP8.79□□□□□ -1
UPF3A-205ENST00000479712 ASXL2Q76L83 1435 aa8.79□□□□□ -1
UPF3A-205ENST00000479712 STRCQ7RTU9 1775 aa8.78□□□□□ -1
UPF3A-205ENST00000479712 BCORL1Q5H9F3 1711 aa8.78□□□□□ -1
UPF3A-205ENST00000479712 C21orf2O43822 256 aa8.78□□□□□ -1
UPF3A-205ENST00000479712 ADH1AP07327 375 aa8.78□□□□□ -1
UPF3A-205ENST00000479712 SMTNP53814 917 aa8.78□□□□□ -1
UPF3A-205ENST00000479712 NAA30Q147X3 362 aaPredicted RBP8.78□□□□□ -1
UPF3A-205ENST00000479712 A6NJY4 79 aa8.77□□□□□ -1.01
UPF3A-205ENST00000479712 PPP1R12BO60237 982 aaPredicted RBP8.77□□□□□ -1.01
UPF3A-205ENST00000479712 ERCC3P19447 782 aa8.77□□□□□ -1.01
UPF3A-205ENST00000479712 FOXK2Q01167 660 aa8.77□□□□□ -1.01
UPF3A-205ENST00000479712 SF3B2Q13435 895 aaKnown RBP8.77□□□□□ -1.01
UPF3A-205ENST00000479712 DNAJC14Q6Y2X3 702 aaPredicted RBP8.77□□□□□ -1.01
UPF3A-205ENST00000479712 SLC9A9Q8IVB4 645 aa8.77□□□□□ -1.01
UPF3A-205ENST00000479712 SNIP1Q8TAD8 396 aaKnown RBP8.77□□□□□ -1.01
UPF3A-205ENST00000479712 PKD2L1Q9P0L9 805 aa8.77□□□□□ -1.01
UPF3A-205ENST00000479712 SCHIP1Q9P0W5 487 aaPredicted RBP8.77□□□□□ -1.01
UPF3A-205ENST00000479712 IQSEC2Q5JU85 1478 aa8.77□□□□□ -1.01
UPF3A-205ENST00000479712 IL2RAP01589 272 aa8.76□□□□□ -1.01
UPF3A-205ENST00000479712 FKBP4Q02790 459 aaKnown RBP eCLIP8.76□□□□□ -1.01
UPF3A-205ENST00000479712 MTMR3Q13615 1198 aa8.76□□□□□ -1.01
UPF3A-205ENST00000479712 MTFR1Q15390 333 aa8.76□□□□□ -1.01
UPF3A-205ENST00000479712 TBCELQ5QJ74 424 aa8.76□□□□□ -1.01
UPF3A-205ENST00000479712 XAGE2Q96GT9 111 aa8.76□□□□□ -1.01
UPF3A-205ENST00000479712 RGS17Q9UGC6 210 aaPredicted RBP8.76□□□□□ -1.01
UPF3A-205ENST00000479712 YEATS2Q9ULM3 1422 aa8.75□□□□□ -1.01
UPF3A-205ENST00000479712 CBLBQ13191 982 aa8.75□□□□□ -1.01
UPF3A-205ENST00000479712 TLR1Q15399 786 aa8.75□□□□□ -1.01
UPF3A-205ENST00000479712 HELQQ8TDG4 1101 aa8.75□□□□□ -1.01
UPF3A-205ENST00000479712 CNKSR1Q969H4 720 aa8.75□□□□□ -1.01
UPF3A-205ENST00000479712 ARID4BQ4LE39 1312 aaPredicted RBP8.75□□□□□ -1.01
UPF3A-205ENST00000479712 TTBK1Q5TCY1 1321 aaPredicted RBP8.75□□□□□ -1.01
UPF3A-205ENST00000479712 A0A1W2PRU2 124 aa8.74□□□□□ -1.01
UPF3A-205ENST00000479712 ITPKCQ96DU7 683 aa8.74□□□□□ -1.01
UPF3A-205ENST00000479712 ESYT1Q9BSJ8 1104 aa8.74□□□□□ -1.01
UPF3A-205ENST00000479712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.74□□□□□ -1.01
UPF3A-205ENST00000479712 TTC24A2A3L6 582 aaPredicted RBP8.73□□□□□ -1.01
UPF3A-205ENST00000479712 ZIC2O95409 532 aaPredicted RBP8.73□□□□□ -1.01
UPF3A-205ENST00000479712 PSMA6P60900 246 aaKnown RBP8.73□□□□□ -1.01
UPF3A-205ENST00000479712 CLN3Q13286 438 aa8.73□□□□□ -1.01
UPF3A-205ENST00000479712 Q6ZVU0 165 aa8.73□□□□□ -1.01
UPF3A-205ENST00000479712 STAG2Q8N3U4 1231 aa8.73□□□□□ -1.01
UPF3A-205ENST00000479712 C2orf49Q9BVC5 232 aaPredicted RBP8.73□□□□□ -1.01
UPF3A-205ENST00000479712 CHMP3Q9Y3E7 222 aa8.73□□□□□ -1.01
UPF3A-205ENST00000479712 SRCAPQ6ZRS2 3230 aa8.73□□□□□ -1.01
UPF3A-205ENST00000479712 PTPRTO14522 1441 aa8.72□□□□□ -1.01
UPF3A-205ENST00000479712 PLB1Q6P1J6 1458 aa8.72□□□□□ -1.01
UPF3A-205ENST00000479712 EPRSP07814 1512 aaKnown RBP8.72□□□□□ -1.01
UPF3A-205ENST00000479712 J3QL48 77 aa8.72□□□□□ -1.01
UPF3A-205ENST00000479712 CDK2AP1O14519 115 aa8.72□□□□□ -1.01
UPF3A-205ENST00000479712 MAPK1P28482 360 aa8.72□□□□□ -1.01
UPF3A-205ENST00000479712 PTGIRP43119 386 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms