RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 COL15A1P39059 1388 aa19.98■□□□□ 0.79
PRKN-207ENST00000479615 USPL1Q5W0Q7 1092 aa19.98■□□□□ 0.79
PRKN-207ENST00000479615 C10orf71Q711Q0 1435 aa19.98■□□□□ 0.79
PRKN-207ENST00000479615 TM4SF1P30408 202 aa19.97■□□□□ 0.79
PRKN-207ENST00000479615 EIF5P55010 431 aaKnown RBP19.97■□□□□ 0.79
PRKN-207ENST00000479615 CANXP27824 592 aaKnown RBP19.96■□□□□ 0.79
PRKN-207ENST00000479615 IL6STP40189 918 aaPredicted RBP19.96■□□□□ 0.79
PRKN-207ENST00000479615 TAF7Q15545 349 aaPredicted RBP19.95■□□□□ 0.78
PRKN-207ENST00000479615 MCM10Q7L590 875 aa19.95■□□□□ 0.78
PRKN-207ENST00000479615 PNISRQ8TF01 805 aaKnown RBP19.95■□□□□ 0.78
PRKN-207ENST00000479615 C4AP0C0L4 1744 aa19.95■□□□□ 0.78
PRKN-207ENST00000479615 UBR2Q8IWV8 1755 aa19.95■□□□□ 0.78
PRKN-207ENST00000479615 PXDNLA1KZ92 1463 aa19.94■□□□□ 0.78
PRKN-207ENST00000479615 POLRMTO00411 1230 aaKnown RBP19.94■□□□□ 0.78
PRKN-207ENST00000479615 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
PRKN-207ENST00000479615 VIRMAQ69YN4 1812 aaKnown RBP19.93■□□□□ 0.78
PRKN-207ENST00000479615 DDR1Q08345 913 aa19.93■□□□□ 0.78
PRKN-207ENST00000479615 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
PRKN-207ENST00000479615 PLEKHF1Q96S99 279 aa19.93■□□□□ 0.78
PRKN-207ENST00000479615 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
PRKN-207ENST00000479615 A0A0G2JLW4 131 aa19.92■□□□□ 0.78
PRKN-207ENST00000479615 PIM2Q9P1W9 311 aa19.92■□□□□ 0.78
PRKN-207ENST00000479615 KIF13BQ9NQT8 1826 aa19.92■□□□□ 0.78
PRKN-207ENST00000479615 GOLGB1Q14789 3259 aaKnown RBP19.91■□□□□ 0.78
PRKN-207ENST00000479615 DPEP1P16444 411 aa19.91■□□□□ 0.78
PRKN-207ENST00000479615 NFIXQ14938 502 aa19.91■□□□□ 0.78
PRKN-207ENST00000479615 NFE2L2Q16236 605 aa19.91■□□□□ 0.78
PRKN-207ENST00000479615 BCS1LQ9Y276 419 aa19.91■□□□□ 0.78
PRKN-207ENST00000479615 SIPA1L3O60292 1781 aaPredicted RBP19.9■□□□□ 0.78
PRKN-207ENST00000479615 MYBBP1AQ9BQG0 1328 aaKnown RBP19.9■□□□□ 0.78
PRKN-207ENST00000479615 BCL2L12Q9HB09 334 aa19.89■□□□□ 0.77
PRKN-207ENST00000479615 PDZRN3Q9UPQ7 1066 aa19.89■□□□□ 0.77
PRKN-207ENST00000479615 RGL2O15211 777 aa19.88■□□□□ 0.77
PRKN-207ENST00000479615 KCNQ3O43525 872 aa19.88■□□□□ 0.77
PRKN-207ENST00000479615 SERPINB2P05120 415 aa19.88■□□□□ 0.77
PRKN-207ENST00000479615 ZEB1P37275 1124 aaPredicted RBP19.88■□□□□ 0.77
PRKN-207ENST00000479615 DCTN1Q14203 1278 aa19.88■□□□□ 0.77
PRKN-207ENST00000479615 A1BGP04217 495 aa19.87■□□□□ 0.77
PRKN-207ENST00000479615 KCNA3P22001 575 aa19.87■□□□□ 0.77
PRKN-207ENST00000479615 DALRD3Q5D0E6 543 aaKnown RBP19.87■□□□□ 0.77
PRKN-207ENST00000479615 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
PRKN-207ENST00000479615 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
PRKN-207ENST00000479615 LMOD3Q0VAK6 560 aa19.86■□□□□ 0.77
PRKN-207ENST00000479615 CLEC4GQ6UXB4 293 aa19.86■□□□□ 0.77
PRKN-207ENST00000479615 WWC3Q9ULE0 1092 aa19.86■□□□□ 0.77
PRKN-207ENST00000479615 ZNF330Q9Y3S2 320 aaPredicted RBP19.86■□□□□ 0.77
PRKN-207ENST00000479615 TBC1D2BQ9UPU7 963 aa19.85■□□□□ 0.77
PRKN-207ENST00000479615 ZNF652Q9Y2D9 606 aa19.85■□□□□ 0.77
PRKN-207ENST00000479615 ARHGAP27Q6ZUM4 889 aa19.84■□□□□ 0.77
PRKN-207ENST00000479615 DZIP3Q86Y13 1208 aaKnown RBP19.84■□□□□ 0.77
PRKN-207ENST00000479615 SETDB2Q96T68 719 aa19.84■□□□□ 0.77
PRKN-207ENST00000479615 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
PRKN-207ENST00000479615 ADCY9O60503 1353 aa19.83■□□□□ 0.77
PRKN-207ENST00000479615 CARMIL3Q8ND23 1372 aa19.83■□□□□ 0.77
PRKN-207ENST00000479615 GPBP1L1Q9HC44 474 aaPredicted RBP19.83■□□□□ 0.77
PRKN-207ENST00000479615 ATP10DQ9P241 1426 aa19.83■□□□□ 0.76
PRKN-207ENST00000479615 CAMTA2O94983 1202 aa19.82■□□□□ 0.76
PRKN-207ENST00000479615 C1QTNF8P60827 252 aa19.82■□□□□ 0.76
PRKN-207ENST00000479615 TBC1D9BQ66K14 1250 aa19.82■□□□□ 0.76
PRKN-207ENST00000479615 BICDL1Q6ZP65 573 aa19.82■□□□□ 0.76
PRKN-207ENST00000479615 BRIP1Q9BX63 1249 aa19.82■□□□□ 0.76
PRKN-207ENST00000479615 H0YIN7 160 aa19.81■□□□□ 0.76
PRKN-207ENST00000479615 PDE6BP35913 854 aa19.81■□□□□ 0.76
PRKN-207ENST00000479615 RIPK4P57078 832 aa19.81■□□□□ 0.76
PRKN-207ENST00000479615 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.763e-8■■■■■ 70.1
PRKN-207ENST00000479615 KIAA1551Q9HCM1 1747 aa19.81■□□□□ 0.76
PRKN-207ENST00000479615 CHRNA5P30532 468 aa19.8■□□□□ 0.76
PRKN-207ENST00000479615 MIS18AQ9NYP9 233 aa19.8■□□□□ 0.76
PRKN-207ENST00000479615 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
PRKN-207ENST00000479615 EIF4A1P60842 406 aaKnown RBP19.79■□□□□ 0.76
PRKN-207ENST00000479615 TTLL6Q8N841 843 aa19.79■□□□□ 0.76
PRKN-207ENST00000479615 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
PRKN-207ENST00000479615 N4BP2Q86UW6 1770 aaPredicted RBP19.79■□□□□ 0.76
PRKN-207ENST00000479615 NPHP1O15259 732 aa19.78■□□□□ 0.76
PRKN-207ENST00000479615 TMPOP42166 694 aaKnown RBP19.78■□□□□ 0.76
PRKN-207ENST00000479615 ST5P78524 1137 aa19.78■□□□□ 0.76
PRKN-207ENST00000479615 C2CD5Q86YS7 1000 aa19.78■□□□□ 0.76
PRKN-207ENST00000479615 CNBD1Q8NA66 436 aa19.78■□□□□ 0.76
PRKN-207ENST00000479615 RUNDC1Q96C34 613 aa19.78■□□□□ 0.76
PRKN-207ENST00000479615 NRXN2Q9P2S2 1712 aa19.78■□□□□ 0.76
PRKN-207ENST00000479615 ERBB4Q15303 1308 aa19.77■□□□□ 0.76
PRKN-207ENST00000479615 PRR5LQ6MZQ0 368 aa19.77■□□□□ 0.76
PRKN-207ENST00000479615 NBPF26B4DH59 902 aa19.76■□□□□ 0.75
PRKN-207ENST00000479615 NBPF10Q6P3W6 841 aaKnown RBP19.76■□□□□ 0.75
PRKN-207ENST00000479615 NBPF15Q8N660 670 aa19.76■□□□□ 0.75
PRKN-207ENST00000479615 TSPYL4Q9UJ04 414 aa19.76■□□□□ 0.75
PRKN-207ENST00000479615 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
PRKN-207ENST00000479615 TPTE2Q6XPS3 522 aa19.75■□□□□ 0.75
PRKN-207ENST00000479615 THUMPD2Q9BTF0 503 aaKnown RBP19.75■□□□□ 0.75
PRKN-207ENST00000479615 SCN7AQ01118 1682 aa19.75■□□□□ 0.75
PRKN-207ENST00000479615 BRCA1P38398 1863 aaKnown RBP19.74■□□□□ 0.75
PRKN-207ENST00000479615 NBPF5PQ86XG9 351 aaPredicted RBP19.74■□□□□ 0.75
PRKN-207ENST00000479615 PIP4K2AP48426 406 aaPredicted RBP19.73■□□□□ 0.75
PRKN-207ENST00000479615 C9orf131Q5VYM1 1079 aa19.73■□□□□ 0.75
PRKN-207ENST00000479615 ARFGEF1Q9Y6D6 1849 aa19.73■□□□□ 0.75
PRKN-207ENST00000479615 ZC3H4Q9UPT8 1303 aaKnown RBP19.73■□□□□ 0.75
PRKN-207ENST00000479615 AFDNP55196 1824 aaKnown RBP19.72■□□□□ 0.75
PRKN-207ENST00000479615 KIF6Q6ZMV9 814 aa19.72■□□□□ 0.75
PRKN-207ENST00000479615 CNKSR1Q969H4 720 aa19.72■□□□□ 0.75
PRKN-207ENST00000479615 ADAMTS8Q9UP79 889 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms