RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
CMSS1-204ENST00000479555 PRM3Q9NNZ6 103 aa8.27□□□□□ -1.09
CMSS1-204ENST00000479555 KLF15Q9UIH9 416 aa8.27□□□□□ -1.09
CMSS1-204ENST00000479555 PARP3Q9Y6F1 533 aa8.27□□□□□ -1.09
CMSS1-204ENST00000479555 ARSJQ5FYB0 599 aaPredicted RBP8.26□□□□□ -1.09
CMSS1-204ENST00000479555 BTBD6Q96KE9 485 aa8.26□□□□□ -1.09
CMSS1-204ENST00000479555 NIFKQ9BYG3 293 aaKnown RBP8.26□□□□□ -1.09
CMSS1-204ENST00000479555 PCDHGC4Q9Y5F7 938 aa8.26□□□□□ -1.09
CMSS1-204ENST00000479555 A0A1W2PNR3 127 aa8.25□□□□□ -1.09
CMSS1-204ENST00000479555 ATXN7O15265 892 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-204ENST00000479555 FURINP09958 794 aa8.25□□□□□ -1.09
CMSS1-204ENST00000479555 EPXP11678 715 aa8.25□□□□□ -1.09
CMSS1-204ENST00000479555 BAG6P46379 1132 aa8.25□□□□□ -1.09
CMSS1-204ENST00000479555 SIRT1Q96EB6 747 aa8.25□□□□□ -1.09
CMSS1-204ENST00000479555 IQSEC3Q9UPP2 1182 aaPredicted RBP8.25□□□□□ -1.09
CMSS1-204ENST00000479555 KHNYNO15037 678 aaKnown RBP8.24□□□□□ -1.09
CMSS1-204ENST00000479555 MAPTP10636 758 aaKnown RBP8.24□□□□□ -1.09
CMSS1-204ENST00000479555 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
CMSS1-204ENST00000479555 MCM6Q14566 821 aa8.24□□□□□ -1.09
CMSS1-204ENST00000479555 A6NJY4 79 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 ARAFP10398 606 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 DGKGP49619 791 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 TNP2Q05952 138 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 FIGNL1Q6PIW4 674 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 FCHSD1Q86WN1 690 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 STRN4Q9NRL3 753 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 CABP1Q9NZU7 370 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 PCDHGA11Q9Y5H2 935 aa8.23□□□□□ -1.09
CMSS1-204ENST00000479555 K7ELQ4 463 aaPredicted RBP8.22□□□□□ -1.09
CMSS1-204ENST00000479555 TXLNAP40222 546 aa8.22□□□□□ -1.09
CMSS1-204ENST00000479555 PCBP4P57723 403 aaKnown RBP8.22□□□□□ -1.09
CMSS1-204ENST00000479555 MAP7D1Q3KQU3 841 aa8.22□□□□□ -1.09
CMSS1-204ENST00000479555 CHSY3Q70JA7 882 aa8.22□□□□□ -1.09
CMSS1-204ENST00000479555 NLRP8Q86W28 1048 aa8.22□□□□□ -1.09
CMSS1-204ENST00000479555 ZIC5Q96T25 663 aa8.22□□□□□ -1.09
CMSS1-204ENST00000479555 C1QTNF9BB2RNN3 333 aa8.21□□□□□ -1.1
CMSS1-204ENST00000479555 MTFR1Q15390 333 aa8.21□□□□□ -1.1
CMSS1-204ENST00000479555 TBCELQ5QJ74 424 aa8.21□□□□□ -1.1
CMSS1-204ENST00000479555 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
CMSS1-204ENST00000479555 SLC4A9Q96Q91 983 aa8.21□□□□□ -1.1
CMSS1-204ENST00000479555 GNB5O14775 395 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 SKIP12755 728 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 CHRNA4P43681 627 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 WASHC4Q2M389 1173 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 CD163Q86VB7 1156 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 DEPDC4Q8N2C3 294 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
CMSS1-204ENST00000479555 C1orf216Q8TAB5 229 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 COG6Q9Y2V7 657 aa8.2□□□□□ -1.1
CMSS1-204ENST00000479555 CDK2AP1O14519 115 aa8.19□□□□□ -1.1
CMSS1-204ENST00000479555 POM121Q96HA1 1249 aa8.19□□□□□ -1.1
CMSS1-204ENST00000479555 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
CMSS1-204ENST00000479555 ADH6P28332 368 aa8.18□□□□□ -1.1
CMSS1-204ENST00000479555 GTF2IP78347 998 aa8.18□□□□□ -1.1
CMSS1-204ENST00000479555 PSME1Q06323 249 aa8.18□□□□□ -1.1
CMSS1-204ENST00000479555 SH3PXD2AQ5TCZ1 1133 aa8.18□□□□□ -1.1
CMSS1-204ENST00000479555 BICDL1Q6ZP65 573 aa8.18□□□□□ -1.1
CMSS1-204ENST00000479555 ZNF358Q9NW07 568 aa8.18□□□□□ -1.1
CMSS1-204ENST00000479555 GJA3Q9Y6H8 435 aa8.18□□□□□ -1.1
CMSS1-204ENST00000479555 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-204ENST00000479555 NCOA4Q13772 614 aa8.17□□□□□ -1.1
CMSS1-204ENST00000479555 TRIM11Q96F44 468 aa8.17□□□□□ -1.1
CMSS1-204ENST00000479555 ZDHHC3Q9NYG2 299 aa8.17□□□□□ -1.1
CMSS1-204ENST00000479555 FAM157BP0CG42 384 aa8.16□□□□□ -1.1
CMSS1-204ENST00000479555 EML3Q32P44 896 aa8.16□□□□□ -1.1
CMSS1-204ENST00000479555 LRRC69Q6ZNQ3 347 aa8.16□□□□□ -1.1
CMSS1-204ENST00000479555 PRR12Q9ULL5 1215 aa8.16□□□□□ -1.1
CMSS1-204ENST00000479555 SOX11P35716 441 aa8.15□□□□□ -1.1
CMSS1-204ENST00000479555 FAM182BQ5T319 152 aa8.15□□□□□ -1.1
CMSS1-204ENST00000479555 TNS4Q8IZW8 715 aa8.15□□□□□ -1.1
CMSS1-204ENST00000479555 L3MBTL2Q969R5 705 aa8.15□□□□□ -1.1
CMSS1-204ENST00000479555 ALG2Q9H553 416 aa8.15□□□□□ -1.1
CMSS1-204ENST00000479555 SCHIP1Q9P0W5 487 aaPredicted RBP8.15□□□□□ -1.1
CMSS1-204ENST00000479555 EFSO43281 561 aa8.14□□□□□ -1.11
CMSS1-204ENST00000479555 ZNF468Q5VIY5 522 aaPredicted RBP8.14□□□□□ -1.11
CMSS1-204ENST00000479555 ALYREFQ86V81 257 aaKnown RBP8.14□□□□□ -1.11
CMSS1-204ENST00000479555 KRTAP9-2Q9BYQ4 174 aa8.14□□□□□ -1.11
CMSS1-204ENST00000479555 MARK1Q9P0L2 795 aa8.14□□□□□ -1.11
CMSS1-204ENST00000479555 KIAA1024Q9UPX6 916 aa8.14□□□□□ -1.11
CMSS1-204ENST00000479555 NOD1Q9Y239 953 aa8.14□□□□□ -1.11
CMSS1-204ENST00000479555 POM121CA8CG34 1229 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 USP17L5A8MUK1 530 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 ITGB7P26010 798 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 EPHA4P54764 986 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 DOC2BQ14184 412 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 SLC9A9Q8IVB4 645 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 PLVAPQ9BX97 442 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 ZNF232Q9UNY5 417 aa8.13□□□□□ -1.11
CMSS1-204ENST00000479555 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
CMSS1-204ENST00000479555 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
CMSS1-204ENST00000479555 SYT9Q86SS6 491 aa8.12□□□□□ -1.11
CMSS1-204ENST00000479555 ADAMTS19Q8TE59 1207 aa8.12□□□□□ -1.11
CMSS1-204ENST00000479555 SLC30A3Q99726 388 aa8.12□□□□□ -1.11
CMSS1-204ENST00000479555 NOP53Q9NZM5 478 aaKnown RBP8.12□□□□□ -1.11
CMSS1-204ENST00000479555 KRTAP9-6A0A140TA67 174 aa8.11□□□□□ -1.11
CMSS1-204ENST00000479555 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
CMSS1-204ENST00000479555 BACH1O14867 736 aa8.11□□□□□ -1.11
CMSS1-204ENST00000479555 PRKCSHP14314 528 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-204ENST00000479555 NOS2P35228 1153 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms