RNA–Protein interactions for RNA: ENST00000479398.5

PKP4-209, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-209ENST00000479398 THUMPD2Q9BTF0 503 aaKnown RBP27.32■■□□□ 1.96
PKP4-209ENST00000479398 MIS18AQ9NYP9 233 aa27.32■■□□□ 1.96
PKP4-209ENST00000479398 ZBTB1Q9Y2K1 713 aa27.32■■□□□ 1.96
PKP4-209ENST00000479398 PNISRQ8TF01 805 aaKnown RBP27.31■■□□□ 1.96
PKP4-209ENST00000479398 SOS1Q07889 1333 aaPredicted RBP27.31■■□□□ 1.96
PKP4-209ENST00000479398 ANP32CO43423 234 aa27.3■■□□□ 1.96
PKP4-209ENST00000479398 CANXP27824 592 aaKnown RBP27.3■■□□□ 1.96
PKP4-209ENST00000479398 SRP68Q9UHB9 627 aaKnown RBP27.29■■□□□ 1.96
PKP4-209ENST00000479398 MMP10P09238 476 aa27.28■■□□□ 1.96
PKP4-209ENST00000479398 SNRPA1P09661 255 aaKnown RBP27.28■■□□□ 1.96
PKP4-209ENST00000479398 CCDC184Q52MB2 194 aa27.28■■□□□ 1.96
PKP4-209ENST00000479398 RRP7AQ9Y3A4 280 aaKnown RBP27.28■■□□□ 1.96
PKP4-209ENST00000479398 CD2APQ9Y5K6 639 aa27.28■■□□□ 1.96
PKP4-209ENST00000479398 USP16Q9Y5T5 823 aa27.28■■□□□ 1.96
PKP4-209ENST00000479398 USP42Q9H9J4 1324 aaKnown RBP27.27■■□□□ 1.96
PKP4-209ENST00000479398 LMOD3Q0VAK6 560 aa27.27■■□□□ 1.96
PKP4-209ENST00000479398 NEUROD2Q15784 382 aa27.27■■□□□ 1.96
PKP4-209ENST00000479398 C4AP0C0L4 1744 aa27.27■■□□□ 1.96
PKP4-209ENST00000479398 ZPR1O75312 459 aa27.26■■□□□ 1.95
PKP4-209ENST00000479398 A1BGP04217 495 aa27.26■■□□□ 1.95
PKP4-209ENST00000479398 EIF5P55010 431 aaKnown RBP27.26■■□□□ 1.95
PKP4-209ENST00000479398 NLGN2Q8NFZ4 835 aa27.25■■□□□ 1.95
PKP4-209ENST00000479398 NARFQ9UHQ1 456 aa27.25■■□□□ 1.95
PKP4-209ENST00000479398 PRAMEF22A3QJZ6 481 aa27.24■■□□□ 1.95
PKP4-209ENST00000479398 FKBP8Q14318 412 aa27.24■■□□□ 1.95
PKP4-209ENST00000479398 COL15A1P39059 1388 aa27.23■■□□□ 1.95
PKP4-209ENST00000479398 USPL1Q5W0Q7 1092 aa27.23■■□□□ 1.95
PKP4-209ENST00000479398 A0A087WZG4 1122 aa27.22■■□□□ 1.95
PKP4-209ENST00000479398 IL6STP40189 918 aaPredicted RBP27.22■■□□□ 1.95
PKP4-209ENST00000479398 EIF4A1P60842 406 aaKnown RBP27.21■■□□□ 1.95
PKP4-209ENST00000479398 TRIM35Q9UPQ4 493 aa27.21■■□□□ 1.95
PKP4-209ENST00000479398 PARP3Q9Y6F1 533 aa27.21■■□□□ 1.95
PKP4-209ENST00000479398 BABAM1Q9NWV8 329 aa27.2■■□□□ 1.94
PKP4-209ENST00000479398 TM4SF1P30408 202 aa27.19■■□□□ 1.94
PKP4-209ENST00000479398 TSPYL4Q9UJ04 414 aa27.19■■□□□ 1.94
PKP4-209ENST00000479398 KDM3BQ7LBC6 1761 aa27.19■■□□□ 1.94
PKP4-209ENST00000479398 APAF1O14727 1248 aa27.18■■□□□ 1.94
PKP4-209ENST00000479398 GIGYF1O75420 1035 aaPredicted RBP27.18■■□□□ 1.94
PKP4-209ENST00000479398 GPR162Q16538 588 aa27.17■■□□□ 1.94
PKP4-209ENST00000479398 NPM2Q86SE8 214 aaKnown RBP27.17■■□□□ 1.94
PKP4-209ENST00000479398 BCL2L12Q9HB09 334 aa27.17■■□□□ 1.94
PKP4-209ENST00000479398 ZNF330Q9Y3S2 320 aaPredicted RBP27.17■■□□□ 1.94
PKP4-209ENST00000479398 MRS2Q9HD23 443 aa27.16■■□□□ 1.94
PKP4-209ENST00000479398 TBC1D2BQ9UPU7 963 aa27.16■■□□□ 1.94
PKP4-209ENST00000479398 PIP4K2AP48426 406 aaPredicted RBP27.15■■□□□ 1.94
PKP4-209ENST00000479398 DDR1Q08345 913 aa27.14■■□□□ 1.94
PKP4-209ENST00000479398 NBPF26B4DH59 902 aa27.13■■□□□ 1.93
PKP4-209ENST00000479398 NFIXQ14938 502 aa27.13■■□□□ 1.93
PKP4-209ENST00000479398 NBPF10Q6P3W6 841 aaKnown RBP27.13■■□□□ 1.93
PKP4-209ENST00000479398 PELP1Q8IZL8 1130 aaKnown RBP27.13■■□□□ 1.93
PKP4-209ENST00000479398 NBPF15Q8N660 670 aa27.13■■□□□ 1.93
PKP4-209ENST00000479398 POLRMTO00411 1230 aaKnown RBP27.12■■□□□ 1.93
PKP4-209ENST00000479398 CHL1O00533 1208 aa27.12■■□□□ 1.93
PKP4-209ENST00000479398 TGFB2P61812 414 aa27.11■■□□□ 1.93
PKP4-209ENST00000479398 LAS1LQ9Y4W2 734 aaKnown RBP27.11■■□□□ 1.93
PKP4-209ENST00000479398 DZIP3Q86Y13 1208 aaKnown RBP27.1■■□□□ 1.93
PKP4-209ENST00000479398 KIF13BQ9NQT8 1826 aa27.09■■□□□ 1.93
PKP4-209ENST00000479398 CAMTA2O94983 1202 aa27.08■■□□□ 1.93
PKP4-209ENST00000479398 YBX3P16989 372 aaKnown RBP eCLIP27.07■■□□□ 1.92
PKP4-209ENST00000479398 TBC1D9BQ66K14 1250 aa27.07■■□□□ 1.92
PKP4-209ENST00000479398 C10orf71Q711Q0 1435 aa27.07■■□□□ 1.92
PKP4-209ENST00000479398 SERPINB2P05120 415 aa27.06■■□□□ 1.92
PKP4-209ENST00000479398 BICDL1Q6ZP65 573 aa27.06■■□□□ 1.92
PKP4-209ENST00000479398 CFAP44Q96MT7 982 aa27.06■■□□□ 1.92
PKP4-209ENST00000479398 LAMB4A4D0S4 1761 aa27.06■■□□□ 1.92
PKP4-209ENST00000479398 A0A0G2JLW4 131 aa27.05■■□□□ 1.92
PKP4-209ENST00000479398 GRIN3BO60391 1043 aa27.05■■□□□ 1.92
PKP4-209ENST00000479398 EIF2S2P20042 333 aaKnown RBP27.03■■□□□ 1.92
PKP4-209ENST00000479398 YY1P25490 414 aa27.03■■□□□ 1.92
PKP4-209ENST00000479398 CALD1Q05682 793 aaKnown RBP27.03■■□□□ 1.92
PKP4-209ENST00000479398 CLEC4GQ6UXB4 293 aa27.03■■□□□ 1.92
PKP4-209ENST00000479398 AFDNP55196 1824 aaKnown RBP27.02■■□□□ 1.92
PKP4-209ENST00000479398 ZNF853P0CG23 659 aa27.02■■□□□ 1.92
PKP4-209ENST00000479398 DPEP1P16444 411 aa27.02■■□□□ 1.92
PKP4-209ENST00000479398 NGEFQ8N5V2 710 aa27.02■■□□□ 1.92
PKP4-209ENST00000479398 SETDB2Q96T68 719 aa27.02■■□□□ 1.92
PKP4-209ENST00000479398 PXDNLA1KZ92 1463 aa27.01■■□□□ 1.91
PKP4-209ENST00000479398 ERBB4Q15303 1308 aa27.01■■□□□ 1.91
PKP4-209ENST00000479398 MYL6BP14649 208 aa27.01■■□□□ 1.91
PKP4-209ENST00000479398 WWC3Q9ULE0 1092 aa27.01■■□□□ 1.91
PKP4-209ENST00000479398 N4BP2Q86UW6 1770 aaPredicted RBP27.01■■□□□ 1.91
PKP4-209ENST00000479398 RGL2O15211 777 aa27■■□□□ 1.91
PKP4-209ENST00000479398 KCNA3P22001 575 aa27■■□□□ 1.91
PKP4-209ENST00000479398 KRT24Q2M2I5 525 aa27■■□□□ 1.91
PKP4-209ENST00000479398 ZNF652Q9Y2D9 606 aa27■■□□□ 1.91
PKP4-209ENST00000479398 SCN7AQ01118 1682 aa27■■□□□ 1.91
PKP4-209ENST00000479398 CHD4Q14839 1912 aa27■■□□□ 1.91
PKP4-209ENST00000479398 KIAA1551Q9HCM1 1747 aa26.99■■□□□ 1.91
PKP4-209ENST00000479398 GNAI1P63096 354 aa26.99■■□□□ 1.91
PKP4-209ENST00000479398 MBIPQ9NS73 344 aa26.99■■□□□ 1.91
PKP4-209ENST00000479398 IFT57Q9NWB7 429 aa26.99■■□□□ 1.91
PKP4-209ENST00000479398 NRXN2Q9P2S2 1712 aa26.99■■□□□ 1.91
PKP4-209ENST00000479398 CCDC27Q2M243 656 aa26.98■■□□□ 1.91
PKP4-209ENST00000479398 BCORQ6W2J9 1755 aa26.97■■□□□ 1.91
PKP4-209ENST00000479398 SENP3-EIF4A1A0A087X0R7 540 aa26.97■■□□□ 1.91
PKP4-209ENST00000479398 PDIA6Q15084 440 aa26.97■■□□□ 1.91
PKP4-209ENST00000479398 NCBP3Q53F19 620 aaKnown RBP26.97■■□□□ 1.91
PKP4-209ENST00000479398 GOLGB1Q14789 3259 aaKnown RBP26.96■■□□□ 1.91
PKP4-209ENST00000479398 ERVV-1B6SEH8 477 aa26.96■■□□□ 1.91
PKP4-209ENST00000479398 HLFQ16534 295 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms