RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 STARD3NLO95772 234 aa23.65■■□□□ 1.38
HLA-A-206ENST00000479320 DCTN1Q14203 1278 aa23.65■■□□□ 1.38
HLA-A-206ENST00000479320 FMNL2Q96PY5 1086 aa23.65■■□□□ 1.38
HLA-A-206ENST00000479320 PLEKHF1Q96S99 279 aa23.65■■□□□ 1.38
HLA-A-206ENST00000479320 TEX13AQ9BXU3 409 aaPredicted RBP23.65■■□□□ 1.38
HLA-A-206ENST00000479320 NEFMP07197 916 aa23.64■■□□□ 1.38
HLA-A-206ENST00000479320 CANXP27824 592 aaKnown RBP23.64■■□□□ 1.38
HLA-A-206ENST00000479320 USPL1Q5W0Q7 1092 aa23.64■■□□□ 1.38
HLA-A-206ENST00000479320 COL15A1P39059 1388 aa23.64■■□□□ 1.37
HLA-A-206ENST00000479320 NARFQ9UHQ1 456 aa23.63■■□□□ 1.37
HLA-A-206ENST00000479320 DLG5Q8TDM6 1919 aa23.63■■□□□ 1.37
HLA-A-206ENST00000479320 TGFB2P61812 414 aa23.62■■□□□ 1.37
HLA-A-206ENST00000479320 ZNF784Q8NCA9 323 aaPredicted RBP23.62■■□□□ 1.37
HLA-A-206ENST00000479320 WWC3Q9ULE0 1092 aa23.62■■□□□ 1.37
HLA-A-206ENST00000479320 KIAA1551Q9HCM1 1747 aa23.62■■□□□ 1.37
HLA-A-206ENST00000479320 C10orf71Q711Q0 1435 aa23.62■■□□□ 1.37
HLA-A-206ENST00000479320 TM4SF1P30408 202 aa23.61■■□□□ 1.37
HLA-A-206ENST00000479320 EIF5P55010 431 aaKnown RBP23.61■■□□□ 1.37
HLA-A-206ENST00000479320 DDR1Q08345 913 aa23.61■■□□□ 1.37
HLA-A-206ENST00000479320 N4BP2Q86UW6 1770 aaPredicted RBP23.61■■□□□ 1.37
HLA-A-206ENST00000479320 PXDNLA1KZ92 1463 aa23.61■■□□□ 1.37
HLA-A-206ENST00000479320 PNNQ9H307 717 aaKnown RBP23.6■■□□□ 1.37
HLA-A-206ENST00000479320 A0A0G2JLW4 131 aa23.59■■□□□ 1.37
HLA-A-206ENST00000479320 POLRMTO00411 1230 aaKnown RBP23.59■■□□□ 1.37
HLA-A-206ENST00000479320 TAF7Q15545 349 aaPredicted RBP23.59■■□□□ 1.37
HLA-A-206ENST00000479320 BCL2L12Q9HB09 334 aa23.59■■□□□ 1.37
HLA-A-206ENST00000479320 MYBBP1AQ9BQG0 1328 aaKnown RBP23.58■■□□□ 1.37
HLA-A-206ENST00000479320 A1BGP04217 495 aa23.58■■□□□ 1.36
HLA-A-206ENST00000479320 NFE2L2Q16236 605 aa23.58■■□□□ 1.36
HLA-A-206ENST00000479320 USP16Q9Y5T5 823 aa23.58■■□□□ 1.36
HLA-A-206ENST00000479320 A0A087WZG4 1122 aa23.56■■□□□ 1.36
HLA-A-206ENST00000479320 PRAMEF22A3QJZ6 481 aa23.56■■□□□ 1.36
HLA-A-206ENST00000479320 DPEP1P16444 411 aa23.56■■□□□ 1.36
HLA-A-206ENST00000479320 IL6STP40189 918 aaPredicted RBP23.56■■□□□ 1.36
HLA-A-206ENST00000479320 NFIXQ14938 502 aa23.56■■□□□ 1.36
HLA-A-206ENST00000479320 MAPK8IP3Q9UPT6 1336 aa23.56■■□□□ 1.36
HLA-A-206ENST00000479320 SNRPA1P09661 255 aaKnown RBP23.55■■□□□ 1.36
HLA-A-206ENST00000479320 MIS18AQ9NYP9 233 aa23.55■■□□□ 1.36
HLA-A-206ENST00000479320 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
HLA-A-206ENST00000479320 AFDNP55196 1824 aaKnown RBP23.54■■□□□ 1.36
HLA-A-206ENST00000479320 KCNA3P22001 575 aa23.53■■□□□ 1.36
HLA-A-206ENST00000479320 TBC1D2BQ9UPU7 963 aa23.53■■□□□ 1.36
HLA-A-206ENST00000479320 THUMPD2Q9BTF0 503 aaKnown RBP23.52■■□□□ 1.36
HLA-A-206ENST00000479320 BCS1LQ9Y276 419 aa23.52■■□□□ 1.36
HLA-A-206ENST00000479320 BRCA1P38398 1863 aaKnown RBP23.52■■□□□ 1.36
HLA-A-206ENST00000479320 SERPINB2P05120 415 aa23.51■■□□□ 1.35
HLA-A-206ENST00000479320 PNISRQ8TF01 805 aaKnown RBP23.51■■□□□ 1.35
HLA-A-206ENST00000479320 NRXN2Q9P2S2 1712 aa23.5■■□□□ 1.35
HLA-A-206ENST00000479320 PIP4K2AP48426 406 aaPredicted RBP23.5■■□□□ 1.35
HLA-A-206ENST00000479320 NPM2Q86SE8 214 aaKnown RBP23.5■■□□□ 1.35
HLA-A-206ENST00000479320 PRKRIP1Q9H875 184 aaPredicted RBP23.5■■□□□ 1.35
HLA-A-206ENST00000479320 BICDL1Q6ZP65 573 aa23.49■■□□□ 1.35
HLA-A-206ENST00000479320 KDM3BQ7LBC6 1761 aa23.49■■□□□ 1.35
HLA-A-206ENST00000479320 RIPK4P57078 832 aa23.48■■□□□ 1.35
HLA-A-206ENST00000479320 TBC1D9BQ66K14 1250 aa23.48■■□□□ 1.35
HLA-A-206ENST00000479320 PIM2Q9P1W9 311 aa23.48■■□□□ 1.35
HLA-A-206ENST00000479320 SCN7AQ01118 1682 aa23.48■■□□□ 1.35
HLA-A-206ENST00000479320 CHRNA5P30532 468 aa23.47■■□□□ 1.35
HLA-A-206ENST00000479320 CAMTA2O94983 1202 aa23.46■■□□□ 1.35
HLA-A-206ENST00000479320 TMPOP42166 694 aaKnown RBP23.46■■□□□ 1.35
HLA-A-206ENST00000479320 DZIP3Q86Y13 1208 aaKnown RBP23.46■■□□□ 1.35
HLA-A-206ENST00000479320 NBPF26B4DH59 902 aa23.45■■□□□ 1.34
HLA-A-206ENST00000479320 EIF4A1P60842 406 aaKnown RBP23.45■■□□□ 1.34
HLA-A-206ENST00000479320 NBPF10Q6P3W6 841 aaKnown RBP23.45■■□□□ 1.34
HLA-A-206ENST00000479320 NBPF15Q8N660 670 aa23.45■■□□□ 1.34
HLA-A-206ENST00000479320 ARFGEF1Q9Y6D6 1849 aa23.44■■□□□ 1.34
HLA-A-206ENST00000479320 GIGYF1O75420 1035 aaPredicted RBP23.44■■□□□ 1.34
HLA-A-206ENST00000479320 WDR43Q15061 677 aaKnown RBP eCLIP23.44■■□□□ 1.34
HLA-A-206ENST00000479320 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
HLA-A-206ENST00000479320 BCORQ6W2J9 1755 aa23.43■■□□□ 1.34
HLA-A-206ENST00000479320 DALRD3Q5D0E6 543 aaKnown RBP23.43■■□□□ 1.34
HLA-A-206ENST00000479320 ARHGAP27Q6ZUM4 889 aa23.43■■□□□ 1.34
HLA-A-206ENST00000479320 ADAMTS8Q9UP79 889 aa23.43■■□□□ 1.34
HLA-A-206ENST00000479320 LAMB4A4D0S4 1761 aa23.42■■□□□ 1.34
HLA-A-206ENST00000479320 ADCY9O60503 1353 aa23.42■■□□□ 1.34
HLA-A-206ENST00000479320 ATP10DQ9P241 1426 aa23.42■■□□□ 1.34
HLA-A-206ENST00000479320 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
HLA-A-206ENST00000479320 SETDB2Q96T68 719 aa23.41■■□□□ 1.34
HLA-A-206ENST00000479320 RRP7AQ9Y3A4 280 aaKnown RBP23.41■■□□□ 1.34
HLA-A-206ENST00000479320 CARMIL3Q8ND23 1372 aa23.4■■□□□ 1.34
HLA-A-206ENST00000479320 LMOD3Q0VAK6 560 aa23.4■■□□□ 1.34
HLA-A-206ENST00000479320 NEUROD2Q15784 382 aa23.39■■□□□ 1.34
HLA-A-206ENST00000479320 CLEC4GQ6UXB4 293 aa23.39■■□□□ 1.34
HLA-A-206ENST00000479320 TSPYL4Q9UJ04 414 aa23.39■■□□□ 1.34
HLA-A-206ENST00000479320 PRR5LQ6MZQ0 368 aa23.38■■□□□ 1.33
HLA-A-206ENST00000479320 ANKRD31Q8N7Z5 1873 aa23.38■■□□□ 1.33
HLA-A-206ENST00000479320 DLEC1Q9Y238 1755 aa23.38■■□□□ 1.33
HLA-A-206ENST00000479320 C2CD5Q86YS7 1000 aa23.37■■□□□ 1.33
HLA-A-206ENST00000479320 CCDC24Q8N4L8 307 aa23.37■■□□□ 1.33
HLA-A-206ENST00000479320 H0YIN7 160 aa23.36■■□□□ 1.33
HLA-A-206ENST00000479320 BRIP1Q9BX63 1249 aa23.36■■□□□ 1.33
HLA-A-206ENST00000479320 BABAM1Q9NWV8 329 aa23.36■■□□□ 1.33
HLA-A-206ENST00000479320 ZNF652Q9Y2D9 606 aa23.36■■□□□ 1.33
HLA-A-206ENST00000479320 TRIM35Q9UPQ4 493 aa23.35■■□□□ 1.33
HLA-A-206ENST00000479320 RGL2O15211 777 aa23.34■■□□□ 1.33
HLA-A-206ENST00000479320 NGEFQ8N5V2 710 aa23.34■■□□□ 1.33
HLA-A-206ENST00000479320 CNBD1Q8NA66 436 aa23.34■■□□□ 1.33
HLA-A-206ENST00000479320 GPBP1L1Q9HC44 474 aaPredicted RBP23.34■■□□□ 1.33
HLA-A-206ENST00000479320 PDE6BP35913 854 aa23.33■■□□□ 1.33
HLA-A-206ENST00000479320 C1QTNF8P60827 252 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms