RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 RIMBP3Q9UFD9 1639 aa8.2□□□□□ -1.1
CMSS1-203ENST00000478909 PIK3C2GO75747 1445 aa8.2□□□□□ -1.1
CMSS1-203ENST00000478909 SMG6Q86US8 1419 aaKnown RBP8.2□□□□□ -1.1
CMSS1-203ENST00000478909 PLEKHG3A1L390 1219 aa8.19□□□□□ -1.1
CMSS1-203ENST00000478909 TMC1Q8TDI8 760 aa8.19□□□□□ -1.1
CMSS1-203ENST00000478909 SLC52A1Q9NWF4 448 aa8.19□□□□□ -1.1
CMSS1-203ENST00000478909 UGGT1Q9NYU2 1555 aa8.18□□□□□ -1.1
CMSS1-203ENST00000478909 MROH2AA6NES4 1674 aa8.18□□□□□ -1.1
CMSS1-203ENST00000478909 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
CMSS1-203ENST00000478909 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
CMSS1-203ENST00000478909 SKIV2LQ15477 1246 aaKnown RBP8.18□□□□□ -1.1
CMSS1-203ENST00000478909 NBPF1Q3BBV0 1214 aa8.18□□□□□ -1.1
CMSS1-203ENST00000478909 SH3D19Q5HYK7 790 aa8.18□□□□□ -1.1
CMSS1-203ENST00000478909 HELBQ8NG08 1087 aaPredicted RBP8.18□□□□□ -1.1
CMSS1-203ENST00000478909 PNISRQ8TF01 805 aaKnown RBP8.18□□□□□ -1.1
CMSS1-203ENST00000478909 DISP3Q9P2K9 1392 aa8.18□□□□□ -1.1
CMSS1-203ENST00000478909 ASXL1Q8IXJ9 1541 aa8.18□□□□□ -1.1
CMSS1-203ENST00000478909 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-203ENST00000478909 NGEFQ8N5V2 710 aa8.17□□□□□ -1.1
CMSS1-203ENST00000478909 ZNF775Q96BV0 537 aaPredicted RBP8.17□□□□□ -1.1
CMSS1-203ENST00000478909 GMPR2Q9P2T1 348 aaKnown RBP8.17□□□□□ -1.1
CMSS1-203ENST00000478909 TLL2Q9Y6L7 1015 aa8.17□□□□□ -1.1
CMSS1-203ENST00000478909 NINLQ9Y2I6 1382 aa8.17□□□□□ -1.1
CMSS1-203ENST00000478909 USP32Q8NFA0 1604 aa8.17□□□□□ -1.1
CMSS1-203ENST00000478909 MYOM1P52179 1685 aa8.17□□□□□ -1.1
CMSS1-203ENST00000478909 BLMP54132 1417 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-203ENST00000478909 PROCA1Q8NCQ7 364 aaPredicted RBP8.16□□□□□ -1.1
CMSS1-203ENST00000478909 FOXJ1Q92949 421 aa8.16□□□□□ -1.1
CMSS1-203ENST00000478909 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.16□□□□□ -1.1
CMSS1-203ENST00000478909 PREX1Q8TCU6 1659 aa8.15□□□□□ -1.1
CMSS1-203ENST00000478909 ADGRB1O14514 1584 aa8.15□□□□□ -1.1
CMSS1-203ENST00000478909 NEXMIFQ5QGS0 1516 aa8.15□□□□□ -1.1
CMSS1-203ENST00000478909 WASF2Q9Y6W5 498 aa8.15□□□□□ -1.1
CMSS1-203ENST00000478909 ARHGEF40Q8TER5 1519 aa8.14□□□□□ -1.11
CMSS1-203ENST00000478909 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
CMSS1-203ENST00000478909 FAM9BQ8IZU0 186 aa8.14□□□□□ -1.11
CMSS1-203ENST00000478909 MPNDQ8N594 471 aa8.14□□□□□ -1.11
CMSS1-203ENST00000478909 C14orf93Q9H972 538 aaKnown RBP8.14□□□□□ -1.11
CMSS1-203ENST00000478909 ATP13A2Q9NQ11 1180 aa8.14□□□□□ -1.11
CMSS1-203ENST00000478909 KNSTRNQ9Y448 316 aa8.14□□□□□ -1.11
CMSS1-203ENST00000478909 ERVK-7P63135 1459 aa8.13□□□□□ -1.11
CMSS1-203ENST00000478909 RNF123Q5XPI4 1314 aa8.13□□□□□ -1.11
CMSS1-203ENST00000478909 SIGLEC1Q9BZZ2 1709 aa8.13□□□□□ -1.11
CMSS1-203ENST00000478909 C4orf48Q5BLP8 95 aa8.13□□□□□ -1.11
CMSS1-203ENST00000478909 POLR3GLQ9BT43 218 aa8.13□□□□□ -1.11
CMSS1-203ENST00000478909 NUDCQ9Y266 331 aa8.13□□□□□ -1.11
CMSS1-203ENST00000478909 NSD2O96028 1365 aa8.12□□□□□ -1.11
CMSS1-203ENST00000478909 QRICH2Q9H0J4 1663 aa8.12□□□□□ -1.11
CMSS1-203ENST00000478909 CENPJQ9HC77 1338 aaPredicted RBP8.12□□□□□ -1.11
CMSS1-203ENST00000478909 TMEM131LA2VDJ0 1609 aa8.12□□□□□ -1.11
CMSS1-203ENST00000478909 PPP2R2DQ66LE6 453 aa8.12□□□□□ -1.11
CMSS1-203ENST00000478909 FAM174AQ8TBP5 190 aa8.12□□□□□ -1.11
CMSS1-203ENST00000478909 SPATA31D1Q6ZQQ2 1576 aa8.11□□□□□ -1.11
CMSS1-203ENST00000478909 AGERQ15109 404 aa8.11□□□□□ -1.11
CMSS1-203ENST00000478909 CCDC184Q52MB2 194 aa8.11□□□□□ -1.11
CMSS1-203ENST00000478909 BPHLQ86WA6 291 aaPredicted RBP8.11□□□□□ -1.11
CMSS1-203ENST00000478909 ARMC2Q8NEN0 867 aa8.11□□□□□ -1.11
CMSS1-203ENST00000478909 PANK3Q9H999 370 aa8.11□□□□□ -1.11
CMSS1-203ENST00000478909 ARHGEF28Q8N1W1 1705 aaKnown RBP8.11□□□□□ -1.11
CMSS1-203ENST00000478909 NNTQ13423 1086 aa8.1□□□□□ -1.11
CMSS1-203ENST00000478909 GGT6Q6P531 493 aa8.1□□□□□ -1.11
CMSS1-203ENST00000478909 LRRN4Q8WUT4 740 aa8.1□□□□□ -1.11
CMSS1-203ENST00000478909 CDK15Q96Q40 435 aa8.1□□□□□ -1.11
CMSS1-203ENST00000478909 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
CMSS1-203ENST00000478909 YEATS2Q9ULM3 1422 aa8.1□□□□□ -1.11
CMSS1-203ENST00000478909 DLC1Q96QB1 1528 aa8.09□□□□□ -1.11
CMSS1-203ENST00000478909 ADGRF5Q8IZF2 1346 aa8.09□□□□□ -1.11
CMSS1-203ENST00000478909 CLTCQ00610 1675 aaKnown RBP8.09□□□□□ -1.11
CMSS1-203ENST00000478909 CAPN5O15484 640 aaPredicted RBP8.09□□□□□ -1.11
CMSS1-203ENST00000478909 RAPGEF3O95398 923 aa8.09□□□□□ -1.11
CMSS1-203ENST00000478909 ADH1CP00326 375 aa8.09□□□□□ -1.11
CMSS1-203ENST00000478909 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
CMSS1-203ENST00000478909 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
CMSS1-203ENST00000478909 SH3RF1Q7Z6J0 888 aa8.09□□□□□ -1.11
CMSS1-203ENST00000478909 KIF13AQ9H1H9 1805 aa8.08□□□□□ -1.12
CMSS1-203ENST00000478909 SNRPBP14678 240 aaKnown RBP8.08□□□□□ -1.12
CMSS1-203ENST00000478909 ARID5BQ14865 1188 aa8.08□□□□□ -1.12
CMSS1-203ENST00000478909 CFAP70Q5T0N1 1121 aa8.08□□□□□ -1.12
CMSS1-203ENST00000478909 CYB5RLQ6IPT4 315 aa8.08□□□□□ -1.12
CMSS1-203ENST00000478909 SH3BP5LQ7L8J4 393 aa8.08□□□□□ -1.12
CMSS1-203ENST00000478909 TRIM47Q96LD4 638 aa8.08□□□□□ -1.12
CMSS1-203ENST00000478909 AP1G2O75843 785 aa8.07□□□□□ -1.12
CMSS1-203ENST00000478909 BMP1P13497 986 aa8.07□□□□□ -1.12
CMSS1-203ENST00000478909 FAM69CQ0P6D2 419 aa8.07□□□□□ -1.12
CMSS1-203ENST00000478909 TRIM46Q7Z4K8 759 aa8.07□□□□□ -1.12
CMSS1-203ENST00000478909 C1QTNF2Q9BXJ5 285 aa8.07□□□□□ -1.12
CMSS1-203ENST00000478909 SENP2Q9HC62 589 aa8.07□□□□□ -1.12
CMSS1-203ENST00000478909 POLR3AO14802 1390 aaPredicted RBP8.07□□□□□ -1.12
CMSS1-203ENST00000478909 MED14O60244 1454 aa8.06□□□□□ -1.12
CMSS1-203ENST00000478909 EVC2Q86UK5 1308 aa8.06□□□□□ -1.12
CMSS1-203ENST00000478909 BRPF1P55201 1214 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-203ENST00000478909 NR6A1Q15406 480 aa8.06□□□□□ -1.12
CMSS1-203ENST00000478909 GPKOWQ92917 476 aaPredicted RBP eCLIP8.06□□□□□ -1.12
CMSS1-203ENST00000478909 KLF16Q9BXK1 252 aaPredicted RBP8.06□□□□□ -1.12
CMSS1-203ENST00000478909 GOPCQ9HD26 462 aa8.06□□□□□ -1.12
CMSS1-203ENST00000478909 ATAD2Q6PL18 1390 aa8.06□□□□□ -1.12
CMSS1-203ENST00000478909 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
CMSS1-203ENST00000478909 NR3C2P08235 984 aa8.05□□□□□ -1.12
CMSS1-203ENST00000478909 TIMP2P16035 220 aa8.05□□□□□ -1.12
CMSS1-203ENST00000478909 PPP2R1AP30153 589 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms