RNA–Protein interactions for RNA: ENST00000478842.5

SSR3-207, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3

Gene SSR3, Length 612 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-207ENST00000478842 COL26A1Q96A83 441 aa9.83□□□□□ -0.84
SSR3-207ENST00000478842 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
SSR3-207ENST00000478842 MTFR1Q15390 333 aa9.82□□□□□ -0.84
SSR3-207ENST00000478842 SCG3Q8WXD2 468 aaKnown RBP9.82□□□□□ -0.84
SSR3-207ENST00000478842 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
SSR3-207ENST00000478842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.82□□□□□ -0.84
SSR3-207ENST00000478842 RAB6BQ9NRW1 208 aa9.82□□□□□ -0.84
SSR3-207ENST00000478842 SCHIP1Q9P0W5 487 aaPredicted RBP9.82□□□□□ -0.84
SSR3-207ENST00000478842 ERCC6L2Q5T890 1561 aa9.82□□□□□ -0.84
SSR3-207ENST00000478842 SHROOM2Q13796 1616 aa9.82□□□□□ -0.84
SSR3-207ENST00000478842 CEP170Q5SW79 1584 aa9.81□□□□□ -0.84
SSR3-207ENST00000478842 ATAD2Q6PL18 1390 aa9.81□□□□□ -0.84
SSR3-207ENST00000478842 IL2RAP01589 272 aa9.81□□□□□ -0.84
SSR3-207ENST00000478842 FOXK2Q01167 660 aa9.81□□□□□ -0.84
SSR3-207ENST00000478842 NBPF15Q8N660 670 aa9.81□□□□□ -0.84
SSR3-207ENST00000478842 NLRP3Q96P20 1036 aa9.81□□□□□ -0.84
SSR3-207ENST00000478842 CHMP3Q9Y3E7 222 aa9.81□□□□□ -0.84
SSR3-207ENST00000478842 GRIN2AQ12879 1464 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 CDK2AP1O14519 115 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 FKBP5Q13451 457 aaPredicted RBP9.8□□□□□ -0.84
SSR3-207ENST00000478842 TLR1Q15399 786 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 STAG2Q8N3U4 1231 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 KDF1Q8NAX2 398 aaPredicted RBP9.8□□□□□ -0.84
SSR3-207ENST00000478842 VTI1AQ96AJ9 217 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 TSEN34Q9BSV6 310 aaKnown RBP9.8□□□□□ -0.84
SSR3-207ENST00000478842 EGFL7Q9UHF1 273 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 HRH3Q9Y5N1 445 aa9.8□□□□□ -0.84
SSR3-207ENST00000478842 PPP1R12BO60237 982 aaPredicted RBP9.79□□□□□ -0.84
SSR3-207ENST00000478842 LGR5O75473 907 aa9.79□□□□□ -0.84
SSR3-207ENST00000478842 SLC9A9Q8IVB4 645 aa9.79□□□□□ -0.84
SSR3-207ENST00000478842 HPS1Q92902 700 aa9.79□□□□□ -0.84
SSR3-207ENST00000478842 TSPAN10Q9H1Z9 355 aaPredicted RBP9.79□□□□□ -0.84
SSR3-207ENST00000478842 NUP160Q12769 1436 aa9.79□□□□□ -0.84
SSR3-207ENST00000478842 MEN1O00255 615 aa9.78□□□□□ -0.84
SSR3-207ENST00000478842 UPP2O95045 317 aa9.78□□□□□ -0.84
SSR3-207ENST00000478842 PSMA6P60900 246 aaKnown RBP9.78□□□□□ -0.84
SSR3-207ENST00000478842 RELBQ01201 579 aa9.78□□□□□ -0.84
SSR3-207ENST00000478842 AGBL1Q96MI9 1066 aa9.78□□□□□ -0.84
SSR3-207ENST00000478842 PDZRN3Q9UPQ7 1066 aa9.78□□□□□ -0.84
SSR3-207ENST00000478842 C21orf2O43822 256 aa9.77□□□□□ -0.85
SSR3-207ENST00000478842 GTF2E1P29083 439 aaPredicted RBP9.77□□□□□ -0.85
SSR3-207ENST00000478842 SERPINB4P48594 390 aa9.77□□□□□ -0.85
SSR3-207ENST00000478842 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.85
SSR3-207ENST00000478842 CENPCQ03188 943 aa9.77□□□□□ -0.85
SSR3-207ENST00000478842 CCDC27Q2M243 656 aa9.77□□□□□ -0.85
SSR3-207ENST00000478842 SOWAHDA6NJG2 315 aa9.76□□□□□ -0.85
SSR3-207ENST00000478842 CAPN5O15484 640 aaPredicted RBP9.76□□□□□ -0.85
SSR3-207ENST00000478842 GPC1P35052 558 aa9.76□□□□□ -0.85
SSR3-207ENST00000478842 MKNK1Q9BUB5 465 aa9.76□□□□□ -0.85
SSR3-207ENST00000478842 ADAMTS12P58397 1594 aa9.75□□□□□ -0.85
SSR3-207ENST00000478842 ZNF395Q9H8N7 513 aaPredicted RBP9.75□□□□□ -0.85
SSR3-207ENST00000478842 IQSEC3Q9UPP2 1182 aaPredicted RBP9.75□□□□□ -0.85
SSR3-207ENST00000478842 ABCC10Q5T3U5 1492 aa9.74□□□□□ -0.85
SSR3-207ENST00000478842 ABL1P00519 1130 aa9.74□□□□□ -0.85
SSR3-207ENST00000478842 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
SSR3-207ENST00000478842 PPARGC1BQ86YN6 1023 aaKnown RBP9.74□□□□□ -0.85
SSR3-207ENST00000478842 GTF3C2Q8WUA4 911 aaPredicted RBP9.74□□□□□ -0.85
SSR3-207ENST00000478842 PURBQ96QR8 312 aaKnown RBP9.74□□□□□ -0.85
SSR3-207ENST00000478842 ZSCAN10Q96SZ4 725 aaPredicted RBP9.74□□□□□ -0.85
SSR3-207ENST00000478842 C2orf49Q9BVC5 232 aaPredicted RBP9.74□□□□□ -0.85
SSR3-207ENST00000478842 FHDC1Q9C0D6 1143 aaPredicted RBP9.74□□□□□ -0.85
SSR3-207ENST00000478842 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 SERTM1A2A2V5 107 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 SPINT1O43278 529 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 SCNN1AP37088 669 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 TEAD4Q15561 434 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 SLC27A3Q5K4L6 730 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 LINC00528Q8N1L1 170 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 SEPT3Q9UH03 358 aa9.73□□□□□ -0.85
SSR3-207ENST00000478842 MAPKBP1O60336 1514 aa9.72□□□□□ -0.85
SSR3-207ENST00000478842 ICMTO60725 284 aa9.72□□□□□ -0.85
SSR3-207ENST00000478842 RNF144AP50876 292 aaPredicted RBP9.72□□□□□ -0.85
SSR3-207ENST00000478842 HIRAP54198 1017 aaPredicted RBP9.72□□□□□ -0.85
SSR3-207ENST00000478842 TBCELQ5QJ74 424 aa9.72□□□□□ -0.85
SSR3-207ENST00000478842 TMEM214Q6NUQ4 689 aaKnown RBP9.72□□□□□ -0.85
SSR3-207ENST00000478842 POTEAQ6S8J7 498 aa9.72□□□□□ -0.85
SSR3-207ENST00000478842 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
SSR3-207ENST00000478842 NIFKQ9BYG3 293 aaKnown RBP9.72□□□□□ -0.85
SSR3-207ENST00000478842 WRNQ14191 1432 aaPredicted RBP eCLIP9.72□□□□□ -0.85
SSR3-207ENST00000478842 AVPP01185 164 aa9.71□□□□□ -0.86
SSR3-207ENST00000478842 FKBP4Q02790 459 aaKnown RBP eCLIP9.71□□□□□ -0.86
SSR3-207ENST00000478842 GNASQ5JWF2 1037 aa9.71□□□□□ -0.86
SSR3-207ENST00000478842 GLYCTKQ8IVS8 523 aa9.71□□□□□ -0.86
SSR3-207ENST00000478842 HELQQ8TDG4 1101 aa9.71□□□□□ -0.86
SSR3-207ENST00000478842 CABP1Q9NZU7 370 aa9.71□□□□□ -0.86
SSR3-207ENST00000478842 PRG4Q92954 1404 aaPredicted RBP9.71□□□□□ -0.86
SSR3-207ENST00000478842 ERICH3Q5RHP9 1530 aa9.71□□□□□ -0.86
SSR3-207ENST00000478842 H3BRB1 525 aa9.7□□□□□ -0.86
SSR3-207ENST00000478842 NOS2P35228 1153 aa9.7□□□□□ -0.86
SSR3-207ENST00000478842 CTC1Q2NKJ3 1217 aa9.7□□□□□ -0.86
SSR3-207ENST00000478842 C16orf46Q6P387 395 aa9.7□□□□□ -0.86
SSR3-207ENST00000478842 GRIP2Q9C0E4 1043 aa9.7□□□□□ -0.86
SSR3-207ENST00000478842 TUT1Q9H6E5 874 aaKnown RBP9.7□□□□□ -0.86
SSR3-207ENST00000478842 BIN2Q9UBW5 565 aaPredicted RBP9.7□□□□□ -0.86
SSR3-207ENST00000478842 DIP2BQ9P265 1576 aa9.7□□□□□ -0.86
SSR3-207ENST00000478842 KDM6BO15054 1643 aa9.7□□□□□ -0.86
SSR3-207ENST00000478842 FAM187AA6NFU0 413 aa9.69□□□□□ -0.86
SSR3-207ENST00000478842 EML1O00423 815 aa9.69□□□□□ -0.86
SSR3-207ENST00000478842 NAA30Q147X3 362 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms