RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 VSIG10Q8N0Z9 540 aa15.54■□□□□ 0.08
SKI-202ENST00000478223 COL15A1P39059 1388 aa15.53■□□□□ 0.08
SKI-202ENST00000478223 ARFGEF1Q9Y6D6 1849 aa15.53■□□□□ 0.08
SKI-202ENST00000478223 PRAMEF22A3QJZ6 481 aa15.53■□□□□ 0.08
SKI-202ENST00000478223 ADRA2BP18089 450 aa15.53■□□□□ 0.08
SKI-202ENST00000478223 NFE2L2Q16236 605 aa15.53■□□□□ 0.08
SKI-202ENST00000478223 RTF1Q92541 710 aaKnown RBP15.53■□□□□ 0.08
SKI-202ENST00000478223 THUMPD2Q9BTF0 503 aaKnown RBP15.53■□□□□ 0.08
SKI-202ENST00000478223 USP42Q9H9J4 1324 aaKnown RBP15.52■□□□□ 0.08
SKI-202ENST00000478223 ZNF316A6NFI3 1004 aaPredicted RBP15.52■□□□□ 0.08
SKI-202ENST00000478223 HTATSF1O43719 755 aaKnown RBP15.52■□□□□ 0.08
SKI-202ENST00000478223 RFC4P35249 363 aa15.52■□□□□ 0.08
SKI-202ENST00000478223 CCDC146Q8IYE0 955 aa15.52■□□□□ 0.08
SKI-202ENST00000478223 MIS18AQ9NYP9 233 aa15.52■□□□□ 0.08
SKI-202ENST00000478223 MAPK8IP3Q9UPT6 1336 aa15.51■□□□□ 0.07
SKI-202ENST00000478223 MMP10P09238 476 aa15.51■□□□□ 0.07
SKI-202ENST00000478223 FMNL2Q96PY5 1086 aa15.51■□□□□ 0.07
SKI-202ENST00000478223 CANXP27824 592 aaKnown RBP15.5■□□□□ 0.07
SKI-202ENST00000478223 FKBP8Q14318 412 aa15.5■□□□□ 0.07
SKI-202ENST00000478223 CCDC184Q52MB2 194 aa15.5■□□□□ 0.07
SKI-202ENST00000478223 COL11A2P13942 1736 aaPredicted RBP15.5■□□□□ 0.07
SKI-202ENST00000478223 CCDC88AQ3V6T2 1871 aa15.49■□□□□ 0.07
SKI-202ENST00000478223 NEFMP07197 916 aa15.49■□□□□ 0.07
SKI-202ENST00000478223 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
SKI-202ENST00000478223 C10orf71Q711Q0 1435 aa15.49■□□□□ 0.07
SKI-202ENST00000478223 PXDNLA1KZ92 1463 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 A1BGP04217 495 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 PIP4K2AP48426 406 aaPredicted RBP15.48■□□□□ 0.07
SKI-202ENST00000478223 DDR1Q08345 913 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 TAF7Q15545 349 aaPredicted RBP15.48■□□□□ 0.07
SKI-202ENST00000478223 USPL1Q5W0Q7 1092 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 BCL2L12Q9HB09 334 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 ADAMTS8Q9UP79 889 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 CD2APQ9Y5K6 639 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 USP16Q9Y5T5 823 aa15.48■□□□□ 0.07
SKI-202ENST00000478223 YBX3P16989 372 aaKnown RBP eCLIP15.47■□□□□ 0.07
SKI-202ENST00000478223 TMPOP42166 694 aaKnown RBP15.47■□□□□ 0.07
SKI-202ENST00000478223 EIF5P55010 431 aaKnown RBP15.47■□□□□ 0.07
SKI-202ENST00000478223 NLGN1Q8N2Q7 840 aa15.47■□□□□ 0.07
SKI-202ENST00000478223 PNNQ9H307 717 aaKnown RBP15.47■□□□□ 0.07
SKI-202ENST00000478223 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
SKI-202ENST00000478223 SBF1O95248 1867 aa15.46■□□□□ 0.07
SKI-202ENST00000478223 STARD3NLO95772 234 aa15.46■□□□□ 0.07
SKI-202ENST00000478223 RIPK4P57078 832 aa15.46■□□□□ 0.07
SKI-202ENST00000478223 WDR43Q15061 677 aaKnown RBP eCLIP15.46■□□□□ 0.07
SKI-202ENST00000478223 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
SKI-202ENST00000478223 NARFQ9UHQ1 456 aa15.46■□□□□ 0.07
SKI-202ENST00000478223 WWC3Q9ULE0 1092 aa15.46■□□□□ 0.07
SKI-202ENST00000478223 DCAF8L1A6NGE4 600 aa15.45■□□□□ 0.06
SKI-202ENST00000478223 GPR162Q16538 588 aa15.45■□□□□ 0.06
SKI-202ENST00000478223 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
SKI-202ENST00000478223 ZPR1O75312 459 aa15.44■□□□□ 0.06
SKI-202ENST00000478223 TM4SF1P30408 202 aa15.44■□□□□ 0.06
SKI-202ENST00000478223 NEUROD2Q15784 382 aa15.44■□□□□ 0.06
SKI-202ENST00000478223 RUNDC1Q96C34 613 aa15.44■□□□□ 0.06
SKI-202ENST00000478223 TEX13AQ9BXU3 409 aaPredicted RBP15.44■□□□□ 0.06
SKI-202ENST00000478223 ZNF330Q9Y3S2 320 aaPredicted RBP15.44■□□□□ 0.06
SKI-202ENST00000478223 POLRMTO00411 1230 aaKnown RBP15.43■□□□□ 0.06
SKI-202ENST00000478223 SNRPA1P09661 255 aaKnown RBP15.43■□□□□ 0.06
SKI-202ENST00000478223 TRIM35Q9UPQ4 493 aa15.43■□□□□ 0.06
SKI-202ENST00000478223 PARP3Q9Y6F1 533 aa15.43■□□□□ 0.06
SKI-202ENST00000478223 NBPF26B4DH59 902 aa15.42■□□□□ 0.06
SKI-202ENST00000478223 YY1P25490 414 aa15.42■□□□□ 0.06
SKI-202ENST00000478223 IL6STP40189 918 aaPredicted RBP15.42■□□□□ 0.06
SKI-202ENST00000478223 EIF4A1P60842 406 aaKnown RBP15.42■□□□□ 0.06
SKI-202ENST00000478223 NFIXQ14938 502 aa15.42■□□□□ 0.06
SKI-202ENST00000478223 NBPF10Q6P3W6 841 aaKnown RBP15.42■□□□□ 0.06
SKI-202ENST00000478223 NBPF15Q8N660 670 aa15.42■□□□□ 0.06
SKI-202ENST00000478223 TBC1D2BQ9UPU7 963 aa15.42■□□□□ 0.06
SKI-202ENST00000478223 CARMIL3Q8ND23 1372 aa15.41■□□□□ 0.06
SKI-202ENST00000478223 GIGYF1O75420 1035 aaPredicted RBP15.4■□□□□ 0.06
SKI-202ENST00000478223 PNISRQ8TF01 805 aaKnown RBP15.4■□□□□ 0.06
SKI-202ENST00000478223 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
SKI-202ENST00000478223 LAMB2P55268 1798 aa15.39■□□□□ 0.05
SKI-202ENST00000478223 A0A087WZG4 1122 aa15.39■□□□□ 0.05
SKI-202ENST00000478223 A0A0G2JLW4 131 aa15.39■□□□□ 0.05
SKI-202ENST00000478223 CAMTA2O94983 1202 aa15.39■□□□□ 0.05
SKI-202ENST00000478223 TBC1D9BQ66K14 1250 aa15.39■□□□□ 0.05
SKI-202ENST00000478223 TSPYL4Q9UJ04 414 aa15.39■□□□□ 0.05
SKI-202ENST00000478223 SENP3-EIF4A1A0A087X0R7 540 aa15.38■□□□□ 0.05
SKI-202ENST00000478223 DPEP1P16444 411 aa15.38■□□□□ 0.05
SKI-202ENST00000478223 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
SKI-202ENST00000478223 APAF1O14727 1248 aa15.37■□□□□ 0.05
SKI-202ENST00000478223 KCNA3P22001 575 aa15.37■□□□□ 0.05
SKI-202ENST00000478223 LMOD3Q0VAK6 560 aa15.37■□□□□ 0.05
SKI-202ENST00000478223 DZIP3Q86Y13 1208 aaKnown RBP15.37■□□□□ 0.05
SKI-202ENST00000478223 SLX4Q8IY92 1834 aa15.37■□□□□ 0.05
SKI-202ENST00000478223 FER1L6Q2WGJ9 1857 aa15.37■□□□□ 0.05
SKI-202ENST00000478223 SERPINB2P05120 415 aa15.36■□□□□ 0.05
SKI-202ENST00000478223 CHRNA5P30532 468 aa15.36■□□□□ 0.05
SKI-202ENST00000478223 TGFB2P61812 414 aa15.36■□□□□ 0.05
SKI-202ENST00000478223 KRT24Q2M2I5 525 aa15.36■□□□□ 0.05
SKI-202ENST00000478223 DICER1Q9UPY3 1922 aaKnown RBP15.36■□□□□ 0.05
SKI-202ENST00000478223 ANP32CO43423 234 aa15.35■□□□□ 0.05
SKI-202ENST00000478223 CCDC24Q8N4L8 307 aa15.35■□□□□ 0.05
SKI-202ENST00000478223 CHL1O00533 1208 aa15.34■□□□□ 0.05
SKI-202ENST00000478223 LAS1LQ9Y4W2 734 aaKnown RBP15.34■□□□□ 0.05
SKI-202ENST00000478223 TIAM2Q8IVF5 1701 aa15.34■□□□□ 0.05
SKI-202ENST00000478223 TAF1P21675 1872 aa15.33■□□□□ 0.05
SKI-202ENST00000478223 GRIN3BO60391 1043 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms