RNA–Protein interactions for RNA: ENST00000478063.2

LMNA-214, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 285 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-214ENST00000478063 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.32
LMNA-214ENST00000478063 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
LMNA-214ENST00000478063 GTF3C3Q9Y5Q9 886 aa17.02■□□□□ 0.32
LMNA-214ENST00000478063 TNS1Q9HBL0 1735 aaKnown RBP17.01■□□□□ 0.31
LMNA-214ENST00000478063 PTF1AQ7RTS3 328 aa17.01■□□□□ 0.31
LMNA-214ENST00000478063 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
LMNA-214ENST00000478063 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
LMNA-214ENST00000478063 C20orf194Q5TEA3 1177 aa17■□□□□ 0.31
LMNA-214ENST00000478063 DBF4Q9UBU7 674 aaPredicted RBP17■□□□□ 0.31
LMNA-214ENST00000478063 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
LMNA-214ENST00000478063 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
LMNA-214ENST00000478063 ANXA1P04083 346 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 MS4A1P11836 297 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 TRIM27P14373 513 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 ATF7IPQ6VMQ6 1270 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 G2E3Q7L622 706 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 DNAJC10Q8IXB1 793 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 FTSJ3Q8IY81 847 aaKnown RBP16.99■□□□□ 0.31
LMNA-214ENST00000478063 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 TEX13AQ9BXU3 409 aaPredicted RBP16.99■□□□□ 0.31
LMNA-214ENST00000478063 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 RREB1Q92766 1687 aa16.99■□□□□ 0.31
LMNA-214ENST00000478063 PTPRCP08575 1304 aa16.98■□□□□ 0.31
LMNA-214ENST00000478063 AFDNP55196 1824 aaKnown RBP16.98■□□□□ 0.31
LMNA-214ENST00000478063 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
LMNA-214ENST00000478063 ARHGAP45Q92619 1136 aa16.98■□□□□ 0.31
LMNA-214ENST00000478063 API5Q9BZZ5 524 aaKnown RBP16.98■□□□□ 0.31
LMNA-214ENST00000478063 BCL11BQ9C0K0 894 aaPredicted RBP16.98■□□□□ 0.31
LMNA-214ENST00000478063 DDX21Q9NR30 783 aaKnown RBP eCLIP16.98■□□□□ 0.31
LMNA-214ENST00000478063 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 LOC102724428A0A0B4J2F2 783 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 TRIM37O94972 964 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 SIK1P57059 783 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 FLIIQ13045 1269 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 PROSER3Q2NL68 480 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 DZIP1LQ8IYY4 767 aaKnown RBP16.97■□□□□ 0.31
LMNA-214ENST00000478063 PANK1Q8TE04 598 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 SLC4A9Q96Q91 983 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 HYPKQ9NX55 129 aa16.97■□□□□ 0.31
LMNA-214ENST00000478063 ERBB4Q15303 1308 aa16.96■□□□□ 0.31
LMNA-214ENST00000478063 STARD3NLO95772 234 aa16.96■□□□□ 0.31
LMNA-214ENST00000478063 MYL6BP14649 208 aa16.96■□□□□ 0.31
LMNA-214ENST00000478063 ATP6V1AP38606 617 aa16.96■□□□□ 0.31
LMNA-214ENST00000478063 PHAXQ9H814 394 aaKnown RBP16.96■□□□□ 0.31
LMNA-214ENST00000478063 RGPD3A6NKT7 1758 aaPredicted RBP16.95■□□□□ 0.3
LMNA-214ENST00000478063 RGPD4Q7Z3J3 1758 aa16.95■□□□□ 0.3
LMNA-214ENST00000478063 RLBP1P12271 317 aa16.95■□□□□ 0.3
LMNA-214ENST00000478063 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
LMNA-214ENST00000478063 FKBP5Q13451 457 aaPredicted RBP16.95■□□□□ 0.3
LMNA-214ENST00000478063 PDIA6Q15084 440 aa16.95■□□□□ 0.3
LMNA-214ENST00000478063 COG6Q9Y2V7 657 aa16.94■□□□□ 0.3
LMNA-214ENST00000478063 ABCC4O15439 1325 aa16.94■□□□□ 0.3
LMNA-214ENST00000478063 ANKRD36CQ5JPF3 1778 aa16.93■□□□□ 0.3
LMNA-214ENST00000478063 A1BGP04217 495 aa16.93■□□□□ 0.3
LMNA-214ENST00000478063 CYP19A1P11511 503 aaPredicted RBP16.93■□□□□ 0.3
LMNA-214ENST00000478063 EXOC6Q8TAG9 804 aa16.93■□□□□ 0.3
LMNA-214ENST00000478063 NUP98P52948 1817 aa16.93■□□□□ 0.3
LMNA-214ENST00000478063 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
LMNA-214ENST00000478063 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
LMNA-214ENST00000478063 AIMP1Q12904 312 aaKnown RBP16.92■□□□□ 0.3
LMNA-214ENST00000478063 ITPK1Q13572 414 aa16.92■□□□□ 0.3
LMNA-214ENST00000478063 NBPF14Q5TI25 921 aa16.92■□□□□ 0.3
LMNA-214ENST00000478063 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
LMNA-214ENST00000478063 TMEM57Q8N5G2 664 aa16.92■□□□□ 0.3
LMNA-214ENST00000478063 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
LMNA-214ENST00000478063 C4BP0C0L5 1744 aa16.92■□□□□ 0.3
LMNA-214ENST00000478063 MVPQ14764 893 aaKnown RBP16.91■□□□□ 0.3
LMNA-214ENST00000478063 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
LMNA-214ENST00000478063 ITPRIPQ8IWB1 547 aa16.91■□□□□ 0.3
LMNA-214ENST00000478063 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
LMNA-214ENST00000478063 CCNL1Q9UK58 526 aaPredicted RBP16.91■□□□□ 0.3
LMNA-214ENST00000478063 F6X3S4 739 aa16.9■□□□□ 0.3
LMNA-214ENST00000478063 DDX58O95786 925 aaKnown RBP16.9■□□□□ 0.3
LMNA-214ENST00000478063 KCNQ4P56696 695 aa16.9■□□□□ 0.3
LMNA-214ENST00000478063 SLC4A10Q6U841 1118 aa16.9■□□□□ 0.3
LMNA-214ENST00000478063 LRP10Q7Z4F1 713 aa16.9■□□□□ 0.3
LMNA-214ENST00000478063 CCDC87Q9NVE4 849 aa16.9■□□□□ 0.3
LMNA-214ENST00000478063 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
LMNA-214ENST00000478063 ADCY9O60503 1353 aa16.89■□□□□ 0.3
LMNA-214ENST00000478063 BCORQ6W2J9 1755 aa16.89■□□□□ 0.3
LMNA-214ENST00000478063 UBR3Q6ZT12 1888 aa16.89■□□□□ 0.29
LMNA-214ENST00000478063 CRKLP46109 303 aaKnown RBP16.89■□□□□ 0.29
LMNA-214ENST00000478063 COPS6Q7L5N1 327 aa16.89■□□□□ 0.29
LMNA-214ENST00000478063 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
LMNA-214ENST00000478063 EP400Q96L91 3159 aa16.89■□□□□ 0.29
LMNA-214ENST00000478063 PI4KAP2A4QPH2 592 aa16.88■□□□□ 0.29
LMNA-214ENST00000478063 PI4KAP1Q8N8J0 262 aa16.88■□□□□ 0.29
LMNA-214ENST00000478063 LINC00116Q8NCU8 138 aa16.88■□□□□ 0.29
LMNA-214ENST00000478063 C4AP0C0L4 1744 aa16.87■□□□□ 0.29
LMNA-214ENST00000478063 APBA3O96018 575 aa16.87■□□□□ 0.29
LMNA-214ENST00000478063 INTS3Q68E01 1043 aaKnown RBP16.87■□□□□ 0.29
LMNA-214ENST00000478063 KSR2Q6VAB6 950 aa16.87■□□□□ 0.29
LMNA-214ENST00000478063 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
LMNA-214ENST00000478063 DNAAF4Q8WXU2 420 aa16.87■□□□□ 0.29
LMNA-214ENST00000478063 DDX19BQ9UMR2 479 aa16.87■□□□□ 0.29
LMNA-214ENST00000478063 MAP3K2Q9Y2U5 619 aa16.87■□□□□ 0.29
LMNA-214ENST00000478063 TUBGCP6Q96RT7 1819 aa16.86■□□□□ 0.29
LMNA-214ENST00000478063 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
LMNA-214ENST00000478063 INTS5Q6P9B9 1019 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms