RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 A1BGP04217 495 aa20.67■□□□□ 0.9
COPS3-207ENST00000477299 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
COPS3-207ENST00000477299 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
COPS3-207ENST00000477299 CRKLP46109 303 aaKnown RBP20.66■□□□□ 0.9
COPS3-207ENST00000477299 TSPYL6Q8N831 410 aa20.66■□□□□ 0.9
COPS3-207ENST00000477299 STK32BQ9NY57 414 aa20.66■□□□□ 0.9
COPS3-207ENST00000477299 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
COPS3-207ENST00000477299 GOLGA2Q08379 1002 aa20.65■□□□□ 0.9
COPS3-207ENST00000477299 NBPF14Q5TI25 921 aa20.65■□□□□ 0.9
COPS3-207ENST00000477299 NECTIN2Q92692 538 aa20.65■□□□□ 0.9
COPS3-207ENST00000477299 SRCAPQ6ZRS2 3230 aa20.64■□□□□ 0.89
COPS3-207ENST00000477299 SLFN5Q08AF3 891 aa20.64■□□□□ 0.89
COPS3-207ENST00000477299 ZBTB1Q9Y2K1 713 aa20.64■□□□□ 0.89
COPS3-207ENST00000477299 NBPF26B4DH59 902 aa20.63■□□□□ 0.89
COPS3-207ENST00000477299 GNPATO15228 680 aa20.63■□□□□ 0.89
COPS3-207ENST00000477299 EIF2S2P20042 333 aaKnown RBP20.63■□□□□ 0.89
COPS3-207ENST00000477299 CANXP27824 592 aaKnown RBP20.63■□□□□ 0.89
COPS3-207ENST00000477299 DUSP27Q5VZP5 1158 aa20.63■□□□□ 0.89
COPS3-207ENST00000477299 NBPF10Q6P3W6 841 aaKnown RBP20.63■□□□□ 0.89
COPS3-207ENST00000477299 NBPF15Q8N660 670 aa20.63■□□□□ 0.89
COPS3-207ENST00000477299 TFCP2L1Q9NZI6 479 aa20.63■□□□□ 0.89
COPS3-207ENST00000477299 QSER1Q2KHR3 1735 aa20.63■□□□□ 0.89
COPS3-207ENST00000477299 PNPLA7Q6ZV29 1317 aa20.62■□□□□ 0.89
COPS3-207ENST00000477299 CNTNAP4Q9C0A0 1308 aa20.62■□□□□ 0.89
COPS3-207ENST00000477299 PHF14O94880 888 aa20.62■□□□□ 0.89
COPS3-207ENST00000477299 EXOSC9Q06265 439 aaKnown RBP20.62■□□□□ 0.89
COPS3-207ENST00000477299 RC3H1Q5TC82 1133 aaKnown RBP20.62■□□□□ 0.89
COPS3-207ENST00000477299 AK7Q96M32 723 aa20.62■□□□□ 0.89
COPS3-207ENST00000477299 YTHDC1Q96MU7 727 aaKnown RBP20.62■□□□□ 0.89
COPS3-207ENST00000477299 CCDC87Q9NVE4 849 aa20.62■□□□□ 0.89
COPS3-207ENST00000477299 COL23A1Q86Y22 540 aaPredicted RBP20.61■□□□□ 0.89
COPS3-207ENST00000477299 TEX13AQ9BXU3 409 aaPredicted RBP20.61■□□□□ 0.89
COPS3-207ENST00000477299 CASZ1Q86V15 1759 aa20.6■□□□□ 0.89
COPS3-207ENST00000477299 STARD3NLO95772 234 aa20.6■□□□□ 0.89
COPS3-207ENST00000477299 ANXA1P04083 346 aa20.6■□□□□ 0.89
COPS3-207ENST00000477299 TRMT2AQ8IZ69 625 aaKnown RBP20.6■□□□□ 0.89
COPS3-207ENST00000477299 C4AP0C0L4 1744 aa20.59■□□□□ 0.89
COPS3-207ENST00000477299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
COPS3-207ENST00000477299 TCERG1O14776 1098 aaKnown RBP20.59■□□□□ 0.89
COPS3-207ENST00000477299 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
COPS3-207ENST00000477299 PROSER3Q2NL68 480 aa20.59■□□□□ 0.89
COPS3-207ENST00000477299 PDIA6Q15084 440 aa20.58■□□□□ 0.89
COPS3-207ENST00000477299 MYH16Q9H6N6 1097 aa20.58■□□□□ 0.89
COPS3-207ENST00000477299 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
COPS3-207ENST00000477299 E9PSI1 815 aa20.57■□□□□ 0.88
COPS3-207ENST00000477299 ARHGEF1Q92888 912 aaKnown RBP20.57■□□□□ 0.88
COPS3-207ENST00000477299 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
COPS3-207ENST00000477299 SOS1Q07889 1333 aaPredicted RBP20.56■□□□□ 0.88
COPS3-207ENST00000477299 MYL6BP14649 208 aa20.56■□□□□ 0.88
COPS3-207ENST00000477299 RTCBQ9Y3I0 505 aaKnown RBP20.56■□□□□ 0.88
COPS3-207ENST00000477299 VAMP4O75379 141 aa20.55■□□□□ 0.88
COPS3-207ENST00000477299 EIF5P55010 431 aaKnown RBP20.55■□□□□ 0.88
COPS3-207ENST00000477299 TWISTNBQ3B726 338 aaPredicted RBP20.55■□□□□ 0.88
COPS3-207ENST00000477299 SRP68Q9UHB9 627 aaKnown RBP20.55■□□□□ 0.88
COPS3-207ENST00000477299 MSH5O43196 834 aa20.54■□□□□ 0.88
COPS3-207ENST00000477299 TRAPPC3LQ5T215 181 aa20.54■□□□□ 0.88
COPS3-207ENST00000477299 HDGFL1Q5TGJ6 251 aa20.54■□□□□ 0.88
COPS3-207ENST00000477299 CHPF2Q9P2E5 772 aa20.54■□□□□ 0.88
COPS3-207ENST00000477299 SSFA2P28290 1259 aa20.53■□□□□ 0.88
COPS3-207ENST00000477299 LRP10Q7Z4F1 713 aa20.53■□□□□ 0.88
COPS3-207ENST00000477299 TBC1D2BQ9UPU7 963 aa20.53■□□□□ 0.88
COPS3-207ENST00000477299 COL15A1P39059 1388 aa20.52■□□□□ 0.88
COPS3-207ENST00000477299 ZBTB7AO95365 584 aa20.52■□□□□ 0.88
COPS3-207ENST00000477299 HOXB7P09629 217 aa20.52■□□□□ 0.88
COPS3-207ENST00000477299 IL6STP40189 918 aaPredicted RBP20.52■□□□□ 0.88
COPS3-207ENST00000477299 MSL1Q68DK7 614 aa20.51■□□□□ 0.87
COPS3-207ENST00000477299 TTLL7Q6ZT98 887 aa20.51■□□□□ 0.87
COPS3-207ENST00000477299 ARXQ96QS3 562 aa20.5■□□□□ 0.87
COPS3-207ENST00000477299 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
COPS3-207ENST00000477299 PHAXQ9H814 394 aaKnown RBP20.49■□□□□ 0.87
COPS3-207ENST00000477299 BCL2L12Q9HB09 334 aa20.49■□□□□ 0.87
COPS3-207ENST00000477299 NUP98P52948 1817 aa20.48■□□□□ 0.87
COPS3-207ENST00000477299 RFC4P35249 363 aa20.48■□□□□ 0.87
COPS3-207ENST00000477299 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
COPS3-207ENST00000477299 USPL1Q5W0Q7 1092 aa20.48■□□□□ 0.87
COPS3-207ENST00000477299 G2E3Q7L622 706 aa20.48■□□□□ 0.87
COPS3-207ENST00000477299 FLAD1Q8NFF5 587 aa20.48■□□□□ 0.87
COPS3-207ENST00000477299 DDX21Q9NR30 783 aaKnown RBP eCLIP20.48■□□□□ 0.87
COPS3-207ENST00000477299 CACNA1FO60840 1977 aa20.48■□□□□ 0.87
COPS3-207ENST00000477299 BCORQ6W2J9 1755 aa20.47■□□□□ 0.87
COPS3-207ENST00000477299 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
COPS3-207ENST00000477299 XAGE3Q8WTP9 111 aa20.47■□□□□ 0.87
COPS3-207ENST00000477299 NARFQ9UHQ1 456 aa20.47■□□□□ 0.87
COPS3-207ENST00000477299 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
COPS3-207ENST00000477299 GYS1P13807 737 aa20.46■□□□□ 0.87
COPS3-207ENST00000477299 ADRA2BP18089 450 aa20.46■□□□□ 0.87
COPS3-207ENST00000477299 COPS6Q7L5N1 327 aa20.46■□□□□ 0.87
COPS3-207ENST00000477299 DZIP3Q86Y13 1208 aaKnown RBP20.46■□□□□ 0.87
COPS3-207ENST00000477299 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
COPS3-207ENST00000477299 ERBB4Q15303 1308 aa20.46■□□□□ 0.87
COPS3-207ENST00000477299 CAMTA2O94983 1202 aa20.45■□□□□ 0.86
COPS3-207ENST00000477299 FKBP8Q14318 412 aa20.45■□□□□ 0.86
COPS3-207ENST00000477299 HLFQ16534 295 aa20.45■□□□□ 0.86
COPS3-207ENST00000477299 CCDC30Q5VVM6 783 aa20.45■□□□□ 0.86
COPS3-207ENST00000477299 DBF4Q9UBU7 674 aaPredicted RBP20.45■□□□□ 0.86
COPS3-207ENST00000477299 SLC4A2P04920 1241 aa20.44■□□□□ 0.86
COPS3-207ENST00000477299 SCN7AQ01118 1682 aa20.44■□□□□ 0.86
COPS3-207ENST00000477299 A0A087WZG4 1122 aa20.43■□□□□ 0.86
COPS3-207ENST00000477299 ZPR1O75312 459 aa20.43■□□□□ 0.86
COPS3-207ENST00000477299 SSH1Q8WYL5 1049 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms