RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 FEZ1Q99689 392 aa18.41■□□□□ 0.54
CLSTN1-205ENST00000477264 BCL2L12Q9HB09 334 aa18.41■□□□□ 0.54
CLSTN1-205ENST00000477264 MARF1Q9Y4F3 1742 aaKnown RBP18.41■□□□□ 0.54
CLSTN1-205ENST00000477264 RGS12O14924 1447 aa18.4■□□□□ 0.54
CLSTN1-205ENST00000477264 HAP1P54257 671 aaPredicted RBP18.4■□□□□ 0.54
CLSTN1-205ENST00000477264 WDR33Q9C0J8 1336 aaKnown RBP18.4■□□□□ 0.54
CLSTN1-205ENST00000477264 RTL1A6NKG5 1358 aa18.4■□□□□ 0.54
CLSTN1-205ENST00000477264 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
CLSTN1-205ENST00000477264 ANKRD7Q92527 254 aa18.4■□□□□ 0.54
CLSTN1-205ENST00000477264 OSBPL3Q9H4L5 887 aa18.4■□□□□ 0.54
CLSTN1-205ENST00000477264 TCHHQ07283 1943 aa18.39■□□□□ 0.53
CLSTN1-205ENST00000477264 IL13P35225 146 aa18.39■□□□□ 0.53
CLSTN1-205ENST00000477264 AMPHP49418 695 aa18.39■□□□□ 0.53
CLSTN1-205ENST00000477264 CBX1P83916 185 aa18.39■□□□□ 0.53
CLSTN1-205ENST00000477264 SYCP1Q15431 976 aa18.39■□□□□ 0.53
CLSTN1-205ENST00000477264 TWISTNBQ3B726 338 aaPredicted RBP18.39■□□□□ 0.53
CLSTN1-205ENST00000477264 MAP3K19Q56UN5 1328 aa18.39■□□□□ 0.53
CLSTN1-205ENST00000477264 A0A0U1RQG5 324 aaPredicted RBP18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 PLEKHG5O94827 1062 aa18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 ADCY5O95622 1261 aa18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 PRKAR2BP31323 418 aa18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 SBNO1A3KN83 1393 aa18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 FLT4P35916 1363 aa18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 NPHP3Q7Z494 1330 aa18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 PEAK1Q9H792 1746 aa18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 TRPM3Q9HCF6 1732 aaPredicted RBP18.38■□□□□ 0.53
CLSTN1-205ENST00000477264 EPB41L2O43491 1005 aaKnown RBP18.37■□□□□ 0.53
CLSTN1-205ENST00000477264 NEK4P51957 841 aa18.37■□□□□ 0.53
CLSTN1-205ENST00000477264 FGD1P98174 961 aa18.37■□□□□ 0.53
CLSTN1-205ENST00000477264 KCNH5Q8NCM2 988 aa18.37■□□□□ 0.53
CLSTN1-205ENST00000477264 USP25Q9UHP3 1055 aa18.37■□□□□ 0.53
CLSTN1-205ENST00000477264 ATP2B3Q16720 1220 aa18.37■□□□□ 0.53
CLSTN1-205ENST00000477264 GOLGA6L6A8MZA4 724 aa18.36■□□□□ 0.53
CLSTN1-205ENST00000477264 CTIFO43310 598 aaKnown RBP18.36■□□□□ 0.53
CLSTN1-205ENST00000477264 MBIPQ9NS73 344 aa18.36■□□□□ 0.53
CLSTN1-205ENST00000477264 HSP90AB2PQ58FF8 381 aa18.35■□□□□ 0.53
CLSTN1-205ENST00000477264 CEP85Q6P2H3 762 aa18.35■□□□□ 0.53
CLSTN1-205ENST00000477264 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
CLSTN1-205ENST00000477264 MX1P20591 662 aa18.35■□□□□ 0.53
CLSTN1-205ENST00000477264 EIF4A2Q14240 407 aaKnown RBP18.35■□□□□ 0.53
CLSTN1-205ENST00000477264 SLAIN2Q9P270 581 aa18.35■□□□□ 0.53
CLSTN1-205ENST00000477264 RPAP1Q9BWH6 1393 aaPredicted RBP18.35■□□□□ 0.53
CLSTN1-205ENST00000477264 KDM4AO75164 1064 aa18.34■□□□□ 0.53
CLSTN1-205ENST00000477264 HMMRO75330 724 aa18.34■□□□□ 0.53
CLSTN1-205ENST00000477264 HMOX1P09601 288 aa18.34■□□□□ 0.53
CLSTN1-205ENST00000477264 KIAA1524Q8TCG1 905 aa18.34■□□□□ 0.53
CLSTN1-205ENST00000477264 GABPB1Q06547 395 aaPredicted RBP18.34■□□□□ 0.53
CLSTN1-205ENST00000477264 TTC12Q9H892 705 aaPredicted RBP18.34■□□□□ 0.53
CLSTN1-205ENST00000477264 LTN1O94822 1766 aa18.33■□□□□ 0.53
CLSTN1-205ENST00000477264 C16orf71Q8IYS4 520 aaPredicted RBP18.33■□□□□ 0.52
CLSTN1-205ENST00000477264 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 BRINP3Q76B58 766 aa18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 USP48Q86UV5 1035 aa18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 DDX17Q92841 729 aaKnown RBP18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 OGFRQ9NZT2 677 aa18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 UBE2HP62256 183 aa18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 CHAMP1Q96JM3 812 aa18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 ALS2Q96Q42 1657 aa18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 PTPRCP08575 1304 aa18.32■□□□□ 0.52
CLSTN1-205ENST00000477264 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
CLSTN1-205ENST00000477264 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
CLSTN1-205ENST00000477264 HOXC9P31274 260 aa18.31■□□□□ 0.52
CLSTN1-205ENST00000477264 TSC1Q92574 1164 aa18.31■□□□□ 0.52
CLSTN1-205ENST00000477264 NFAT5O94916 1531 aa18.31■□□□□ 0.52
CLSTN1-205ENST00000477264 RIOK3O14730 519 aaKnown RBP18.3■□□□□ 0.52
CLSTN1-205ENST00000477264 GCP02774 474 aa18.3■□□□□ 0.52
CLSTN1-205ENST00000477264 ZNF830Q96NB3 372 aaPredicted RBP18.3■□□□□ 0.52
CLSTN1-205ENST00000477264 GADD45BO75293 160 aaPredicted RBP18.3■□□□□ 0.52
CLSTN1-205ENST00000477264 ATP6V1DQ9Y5K8 247 aa18.3■□□□□ 0.52
CLSTN1-205ENST00000477264 SLIT3O75094 1523 aa18.29■□□□□ 0.52
CLSTN1-205ENST00000477264 ZBTB7CA1YPR0 619 aa18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 HCLS1P14317 486 aaPredicted RBP18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 PDE1AP54750 535 aa18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 SULT6B1Q6IMI4 303 aa18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 JARID2Q92833 1246 aaPredicted RBP18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 PXDNQ92626 1479 aa18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 N4BP2Q86UW6 1770 aaPredicted RBP18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 TNS3Q68CZ2 1445 aa18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 FUCA2Q9BTY2 467 aa18.28■□□□□ 0.52
CLSTN1-205ENST00000477264 KIAA0232Q92628 1395 aa18.27■□□□□ 0.52
CLSTN1-205ENST00000477264 C8orf58Q8NAV2 365 aa18.27■□□□□ 0.52
CLSTN1-205ENST00000477264 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
CLSTN1-205ENST00000477264 IP6K1Q92551 441 aa18.27■□□□□ 0.51
CLSTN1-205ENST00000477264 CGNQ9P2M7 1197 aaKnown RBP18.27■□□□□ 0.51
CLSTN1-205ENST00000477264 ARHGEF10O15013 1369 aa18.26■□□□□ 0.51
CLSTN1-205ENST00000477264 PHRF1Q9P1Y6 1649 aaKnown RBP18.26■□□□□ 0.51
CLSTN1-205ENST00000477264 SMARCA5O60264 1052 aaPredicted RBP18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 C17orf53Q8N3J3 647 aaPredicted RBP18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 THUMPD2Q9BTF0 503 aaKnown RBP18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 SRCIN1Q9C0H9 1055 aa18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 SMTNL1A8MU46 457 aa18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 PHACTR3Q96KR7 559 aa18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 KCNF1Q9H3M0 494 aa18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 SALL3Q9BXA9 1300 aa18.25■□□□□ 0.51
CLSTN1-205ENST00000477264 ZSCAN22P10073 491 aaPredicted RBP18.24■□□□□ 0.51
CLSTN1-205ENST00000477264 AEBP1Q8IUX7 1158 aa18.24■□□□□ 0.51
CLSTN1-205ENST00000477264 AOX1Q06278 1338 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms