RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
SREBF1-211ENST00000476994 YBX3P16989 372 aaKnown RBP eCLIP23.01■■□□□ 1.27
SREBF1-211ENST00000476994 GOLGA2Q08379 1002 aa23.01■■□□□ 1.27
SREBF1-211ENST00000476994 ITPK1Q13572 414 aa23.01■■□□□ 1.27
SREBF1-211ENST00000476994 TRMT2AQ8IZ69 625 aaKnown RBP23.01■■□□□ 1.27
SREBF1-211ENST00000476994 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
SREBF1-211ENST00000476994 SLFN5Q08AF3 891 aa23■■□□□ 1.27
SREBF1-211ENST00000476994 IFT57Q9NWB7 429 aa23■■□□□ 1.27
SREBF1-211ENST00000476994 COL5A3P25940 1745 aaPredicted RBP22.99■■□□□ 1.27
SREBF1-211ENST00000476994 CHL1O00533 1208 aa22.99■■□□□ 1.27
SREBF1-211ENST00000476994 GIGYF1O75420 1035 aaPredicted RBP22.99■■□□□ 1.27
SREBF1-211ENST00000476994 CALD1Q05682 793 aaKnown RBP22.99■■□□□ 1.27
SREBF1-211ENST00000476994 TRAPPC3LQ5T215 181 aa22.99■■□□□ 1.27
SREBF1-211ENST00000476994 AMIGO3Q86WK7 504 aa22.99■■□□□ 1.27
SREBF1-211ENST00000476994 CFAP44Q96MT7 982 aa22.99■■□□□ 1.27
SREBF1-211ENST00000476994 TAF7Q15545 349 aaPredicted RBP22.98■■□□□ 1.27
SREBF1-211ENST00000476994 C1QTNF8P60827 252 aa22.97■■□□□ 1.27
SREBF1-211ENST00000476994 TEFQ10587 303 aa22.97■■□□□ 1.27
SREBF1-211ENST00000476994 SMIM5Q71RC9 77 aa22.97■■□□□ 1.27
SREBF1-211ENST00000476994 NFATC2IPQ8NCF5 419 aa22.97■■□□□ 1.27
SREBF1-211ENST00000476994 E9PSI1 815 aa22.96■■□□□ 1.27
SREBF1-211ENST00000476994 ADRA2BP18089 450 aa22.96■■□□□ 1.27
SREBF1-211ENST00000476994 GNAI1P63096 354 aa22.96■■□□□ 1.27
SREBF1-211ENST00000476994 RC3H1Q5TC82 1133 aaKnown RBP22.96■■□□□ 1.27
SREBF1-211ENST00000476994 BABAM1Q9NWV8 329 aa22.96■■□□□ 1.27
SREBF1-211ENST00000476994 KCPQ6ZWJ8 1503 aa22.96■■□□□ 1.27
SREBF1-211ENST00000476994 DUSP27Q5VZP5 1158 aa22.95■■□□□ 1.26
SREBF1-211ENST00000476994 MBIPQ9NS73 344 aa22.95■■□□□ 1.26
SREBF1-211ENST00000476994 FANCIQ9NVI1 1328 aa22.95■■□□□ 1.26
SREBF1-211ENST00000476994 CICQ96RK0 1608 aaPredicted RBP22.94■■□□□ 1.26
SREBF1-211ENST00000476994 RFC4P35249 363 aa22.94■■□□□ 1.26
SREBF1-211ENST00000476994 NLGN1Q8N2Q7 840 aa22.94■■□□□ 1.26
SREBF1-211ENST00000476994 MIS18AQ9NYP9 233 aa22.94■■□□□ 1.26
SREBF1-211ENST00000476994 CNTNAP4Q9C0A0 1308 aa22.93■■□□□ 1.26
SREBF1-211ENST00000476994 MMP10P09238 476 aa22.93■■□□□ 1.26
SREBF1-211ENST00000476994 TSR2Q969E8 191 aaKnown RBP22.93■■□□□ 1.26
SREBF1-211ENST00000476994 LAMB4A4D0S4 1761 aa22.92■■□□□ 1.26
SREBF1-211ENST00000476994 KCNQ3O43525 872 aa22.92■■□□□ 1.26
SREBF1-211ENST00000476994 KIF13BQ9NQT8 1826 aa22.92■■□□□ 1.26
SREBF1-211ENST00000476994 MYH14Q7Z406 1995 aaKnown RBP22.91■■□□□ 1.26
SREBF1-211ENST00000476994 BTBD11A6QL63 1104 aa22.91■■□□□ 1.26
SREBF1-211ENST00000476994 PTCD1O75127 700 aaKnown RBP22.91■■□□□ 1.26
SREBF1-211ENST00000476994 TSPYL4Q9UJ04 414 aa22.91■■□□□ 1.26
SREBF1-211ENST00000476994 TJP1Q07157 1748 aa22.91■■□□□ 1.26
SREBF1-211ENST00000476994 HEG1Q9ULI3 1381 aa22.9■■□□□ 1.26
SREBF1-211ENST00000476994 RPS6KA4O75676 772 aa22.9■■□□□ 1.26
SREBF1-211ENST00000476994 MYH16Q9H6N6 1097 aa22.9■■□□□ 1.26
SREBF1-211ENST00000476994 LAS1LQ9Y4W2 734 aaKnown RBP22.9■■□□□ 1.26
SREBF1-211ENST00000476994 C4AP0C0L4 1744 aa22.9■■□□□ 1.26
SREBF1-211ENST00000476994 SLC39A6Q13433 755 aa22.89■■□□□ 1.25
SREBF1-211ENST00000476994 SLC4A9Q96Q91 983 aa22.89■■□□□ 1.25
SREBF1-211ENST00000476994 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
SREBF1-211ENST00000476994 ARHGEF1Q92888 912 aaKnown RBP22.88■■□□□ 1.25
SREBF1-211ENST00000476994 CCDC87Q9NVE4 849 aa22.88■■□□□ 1.25
SREBF1-211ENST00000476994 WWC3Q9ULE0 1092 aa22.88■■□□□ 1.25
SREBF1-211ENST00000476994 PARP3Q9Y6F1 533 aa22.88■■□□□ 1.25
SREBF1-211ENST00000476994 CACNA1FO60840 1977 aa22.88■■□□□ 1.25
SREBF1-211ENST00000476994 ATP10DQ9P241 1426 aa22.88■■□□□ 1.25
SREBF1-211ENST00000476994 N4BP2Q86UW6 1770 aaPredicted RBP22.88■■□□□ 1.25
SREBF1-211ENST00000476994 EIF4A1P60842 406 aaKnown RBP22.87■■□□□ 1.25
SREBF1-211ENST00000476994 GPBP1L1Q9HC44 474 aaPredicted RBP22.87■■□□□ 1.25
SREBF1-211ENST00000476994 TGFB2P61812 414 aa22.86■■□□□ 1.25
SREBF1-211ENST00000476994 KRT24Q2M2I5 525 aa22.85■■□□□ 1.25
SREBF1-211ENST00000476994 CRKLP46109 303 aaKnown RBP22.84■■□□□ 1.25
SREBF1-211ENST00000476994 EXOSC9Q06265 439 aaKnown RBP22.84■■□□□ 1.25
SREBF1-211ENST00000476994 GYS1P13807 737 aa22.83■■□□□ 1.25
SREBF1-211ENST00000476994 C8orf58Q8NAV2 365 aa22.83■■□□□ 1.25
SREBF1-211ENST00000476994 ZNF496Q96IT1 587 aaPredicted RBP22.83■■□□□ 1.25
SREBF1-211ENST00000476994 TSPYL6Q8N831 410 aa22.82■■□□□ 1.24
SREBF1-211ENST00000476994 PXDNLA1KZ92 1463 aa22.81■■□□□ 1.24
SREBF1-211ENST00000476994 C10orf71Q711Q0 1435 aa22.81■■□□□ 1.24
SREBF1-211ENST00000476994 KIAA1551Q9HCM1 1747 aa22.8■■□□□ 1.24
SREBF1-211ENST00000476994 BCS1LQ9Y276 419 aa22.8■■□□□ 1.24
SREBF1-211ENST00000476994 ZPR1O75312 459 aa22.79■■□□□ 1.24
SREBF1-211ENST00000476994 TTC5Q8N0Z6 440 aa22.79■■□□□ 1.24
SREBF1-211ENST00000476994 ZNF526Q8TF50 670 aaPredicted RBP22.79■■□□□ 1.24
SREBF1-211ENST00000476994 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
SREBF1-211ENST00000476994 BRCA1P38398 1863 aaKnown RBP22.79■■□□□ 1.24
SREBF1-211ENST00000476994 ADCY9O60503 1353 aa22.78■■□□□ 1.24
SREBF1-211ENST00000476994 A0A0G2JLW4 131 aa22.78■■□□□ 1.24
SREBF1-211ENST00000476994 USP42Q9H9J4 1324 aaKnown RBP22.78■■□□□ 1.24
SREBF1-211ENST00000476994 PRAMEF22A3QJZ6 481 aa22.77■■□□□ 1.24
SREBF1-211ENST00000476994 VAMP4O75379 141 aa22.77■■□□□ 1.24
SREBF1-211ENST00000476994 ARFGEF1Q9Y6D6 1849 aa22.77■■□□□ 1.24
SREBF1-211ENST00000476994 SOS1Q07889 1333 aaPredicted RBP22.77■■□□□ 1.24
SREBF1-211ENST00000476994 HOXB7P09629 217 aa22.76■■□□□ 1.23
SREBF1-211ENST00000476994 TWISTNBQ3B726 338 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-211ENST00000476994 VSIG10Q8N0Z9 540 aa22.76■■□□□ 1.23
SREBF1-211ENST00000476994 CT47B1P0C2W7 299 aaPredicted RBP22.75■■□□□ 1.23
SREBF1-211ENST00000476994 DPEP1P16444 411 aa22.75■■□□□ 1.23
SREBF1-211ENST00000476994 DNAJC10Q8IXB1 793 aa22.75■■□□□ 1.23
SREBF1-211ENST00000476994 SRP68Q9UHB9 627 aaKnown RBP22.75■■□□□ 1.23
SREBF1-211ENST00000476994 ELL2O00472 640 aaPredicted RBP22.74■■□□□ 1.23
SREBF1-211ENST00000476994 INTS5Q6P9B9 1019 aaKnown RBP22.74■■□□□ 1.23
SREBF1-211ENST00000476994 ARHGAP27Q6ZUM4 889 aa22.74■■□□□ 1.23
SREBF1-211ENST00000476994 SNRPA1P09661 255 aaKnown RBP22.73■■□□□ 1.23
SREBF1-211ENST00000476994 FKBP8Q14318 412 aa22.73■■□□□ 1.23
SREBF1-211ENST00000476994 PIM2Q9P1W9 311 aa22.73■■□□□ 1.23
SREBF1-211ENST00000476994 USP16Q9Y5T5 823 aa22.71■■□□□ 1.23
SREBF1-211ENST00000476994 CYP19A1P11511 503 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms