RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 KSR2Q6VAB6 950 aa28.76■■■□□ 2.19
CCDC7-206ENST00000476558 UBR2Q8IWV8 1755 aa28.76■■■□□ 2.19
CCDC7-206ENST00000476558 ATP8B2P98198 1209 aa28.76■■■□□ 2.19
CCDC7-206ENST00000476558 DISP2A7MBM2 1401 aa28.75■■■□□ 2.19
CCDC7-206ENST00000476558 PAPPAQ13219 1627 aa28.75■■■□□ 2.19
CCDC7-206ENST00000476558 UBTFL1P0CB47 393 aaPredicted RBP28.73■■■□□ 2.19
CCDC7-206ENST00000476558 DDX54Q8TDD1 881 aaKnown RBP28.73■■■□□ 2.19
CCDC7-206ENST00000476558 USP16Q9Y5T5 823 aa28.73■■■□□ 2.19
CCDC7-206ENST00000476558 LRRFIP2Q9Y608 721 aaKnown RBP28.73■■■□□ 2.19
CCDC7-206ENST00000476558 PLCH1Q4KWH8 1693 aa28.73■■■□□ 2.19
CCDC7-206ENST00000476558 BMP2KLQ5H9B9 411 aa28.72■■■□□ 2.19
CCDC7-206ENST00000476558 LRP10Q7Z4F1 713 aa28.72■■■□□ 2.19
CCDC7-206ENST00000476558 MAP3K2Q9Y2U5 619 aa28.72■■■□□ 2.19
CCDC7-206ENST00000476558 LAMB4A4D0S4 1761 aa28.72■■■□□ 2.19
CCDC7-206ENST00000476558 TOGARAM1Q9Y4F4 1720 aa28.72■■■□□ 2.19
CCDC7-206ENST00000476558 ALDH1L1O75891 902 aa28.71■■■□□ 2.19
CCDC7-206ENST00000476558 USP35Q9P2H5 1018 aa28.71■■■□□ 2.19
CCDC7-206ENST00000476558 TOM1O60784 492 aa28.7■■■□□ 2.18
CCDC7-206ENST00000476558 PNMA6EA0A0J9YXQ4 647 aa28.69■■■□□ 2.18
CCDC7-206ENST00000476558 PLEKHM2Q8IWE5 1019 aa28.69■■■□□ 2.18
CCDC7-206ENST00000476558 KCPQ6ZWJ8 1503 aa28.69■■■□□ 2.18
CCDC7-206ENST00000476558 DDX58O95786 925 aaKnown RBP28.69■■■□□ 2.18
CCDC7-206ENST00000476558 TNS2Q63HR2 1409 aa28.68■■■□□ 2.18
CCDC7-206ENST00000476558 IBTKQ9P2D0 1353 aaPredicted RBP28.68■■■□□ 2.18
CCDC7-206ENST00000476558 NBPF7P0C2Y1 421 aaPredicted RBP28.68■■■□□ 2.18
CCDC7-206ENST00000476558 SSH3Q8TE77 659 aa28.66■■■□□ 2.18
CCDC7-206ENST00000476558 WNK3Q9BYP7 1800 aa28.66■■■□□ 2.18
CCDC7-206ENST00000476558 NRAPQ86VF7 1730 aa28.66■■■□□ 2.18
CCDC7-206ENST00000476558 LINS1Q8NG48 757 aa28.65■■■□□ 2.18
CCDC7-206ENST00000476558 NOP58Q9Y2X3 529 aaKnown RBP28.65■■■□□ 2.18
CCDC7-206ENST00000476558 POLA2Q14181 598 aa28.64■■■□□ 2.18
CCDC7-206ENST00000476558 C16orf71Q8IYS4 520 aaPredicted RBP28.64■■■□□ 2.18
CCDC7-206ENST00000476558 XAGE3Q8WTP9 111 aa28.64■■■□□ 2.17
CCDC7-206ENST00000476558 DDRGK1Q96HY6 314 aa28.64■■■□□ 2.17
CCDC7-206ENST00000476558 ERBB4Q15303 1308 aa28.63■■■□□ 2.17
CCDC7-206ENST00000476558 MYL6BP14649 208 aa28.63■■■□□ 2.17
CCDC7-206ENST00000476558 AIMP1Q12904 312 aaKnown RBP28.63■■■□□ 2.17
CCDC7-206ENST00000476558 ZBTB47Q9UFB7 747 aaPredicted RBP28.63■■■□□ 2.17
CCDC7-206ENST00000476558 UTYO14607 1347 aa28.63■■■□□ 2.17
CCDC7-206ENST00000476558 SMARCA5O60264 1052 aaPredicted RBP28.62■■■□□ 2.17
CCDC7-206ENST00000476558 COPS6Q7L5N1 327 aa28.62■■■□□ 2.17
CCDC7-206ENST00000476558 CWF19L2Q2TBE0 894 aaKnown RBP28.6■■■□□ 2.17
CCDC7-206ENST00000476558 OTUD7AQ8TE49 926 aaPredicted RBP28.6■■■□□ 2.17
CCDC7-206ENST00000476558 EXOC6BQ9Y2D4 811 aa28.6■■■□□ 2.17
CCDC7-206ENST00000476558 LRP6O75581 1613 aa28.6■■■□□ 2.17
CCDC7-206ENST00000476558 PIP4K2BP78356 416 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 MTX1Q13505 466 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 PPP1R42Q7Z4L9 355 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 RIC3Q7Z5B4 369 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 ADAMTS2O95450 1211 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 IGKV5-2P06315 115 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 TBC1D32Q96NH3 1257 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 ITGB4P16144 1822 aa28.59■■■□□ 2.17
CCDC7-206ENST00000476558 GSPT1P15170 499 aaKnown RBP28.58■■■□□ 2.17
CCDC7-206ENST00000476558 ANKRD13DQ6ZTN6 518 aa28.58■■■□□ 2.17
CCDC7-206ENST00000476558 METTL22Q9BUU2 404 aaPredicted RBP28.58■■■□□ 2.17
CCDC7-206ENST00000476558 TMOD3Q9NYL9 352 aa28.58■■■□□ 2.17
CCDC7-206ENST00000476558 APBB1O00213 710 aa28.57■■■□□ 2.16
CCDC7-206ENST00000476558 TTC22Q5TAA0 569 aa28.57■■■□□ 2.16
CCDC7-206ENST00000476558 UPF2Q9HAU5 1272 aaKnown RBP28.57■■■□□ 2.16
CCDC7-206ENST00000476558 NBPF26B4DH59 902 aa28.57■■■□□ 2.16
CCDC7-206ENST00000476558 NBPF14Q5TI25 921 aa28.57■■■□□ 2.16
CCDC7-206ENST00000476558 NBPF10Q6P3W6 841 aaKnown RBP28.57■■■□□ 2.16
CCDC7-206ENST00000476558 NBPF15Q8N660 670 aa28.57■■■□□ 2.16
CCDC7-206ENST00000476558 OSBPL3Q9H4L5 887 aa28.57■■■□□ 2.16
CCDC7-206ENST00000476558 C9orf78Q9NZ63 289 aaPredicted RBP28.57■■■□□ 2.16
CCDC7-206ENST00000476558 NWD2Q9ULI1 1742 aa28.57■■■□□ 2.16
CCDC7-206ENST00000476558 SPATA31A1Q5TZJ5 1347 aa28.56■■■□□ 2.16
CCDC7-206ENST00000476558 LRRCC1Q9C099 1032 aa28.56■■■□□ 2.16
CCDC7-206ENST00000476558 HDAC5Q9UQL6 1122 aa28.56■■■□□ 2.16
CCDC7-206ENST00000476558 SALL3Q9BXA9 1300 aa28.56■■■□□ 2.16
CCDC7-206ENST00000476558 GRM8O00222 908 aa28.55■■■□□ 2.16
CCDC7-206ENST00000476558 EXOC5O00471 708 aa28.55■■■□□ 2.16
CCDC7-206ENST00000476558 PIP4K2AP48426 406 aaPredicted RBP28.55■■■□□ 2.16
CCDC7-206ENST00000476558 PIGBQ92521 554 aa28.55■■■□□ 2.16
CCDC7-206ENST00000476558 CDCA7Q9BWT1 371 aaPredicted RBP28.55■■■□□ 2.16
CCDC7-206ENST00000476558 THRAP3Q9Y2W1 955 aaKnown RBP28.55■■■□□ 2.16
CCDC7-206ENST00000476558 SLIT2O94813 1529 aa28.55■■■□□ 2.16
CCDC7-206ENST00000476558 ARFGEF2Q9Y6D5 1785 aa28.54■■■□□ 2.16
CCDC7-206ENST00000476558 NEURL1BA8MQ27 555 aa28.54■■■□□ 2.16
CCDC7-206ENST00000476558 SRGAP3O43295 1099 aa28.53■■■□□ 2.16
CCDC7-206ENST00000476558 PTCD1O75127 700 aaKnown RBP28.53■■■□□ 2.16
CCDC7-206ENST00000476558 NEXNQ0ZGT2 675 aa28.53■■■□□ 2.16
CCDC7-206ENST00000476558 UBAP1LF5GYI3 381 aa28.52■■■□□ 2.16
CCDC7-206ENST00000476558 RAB11FIP3O75154 756 aa28.52■■■□□ 2.16
CCDC7-206ENST00000476558 KAZALD1Q96I82 304 aa28.52■■■□□ 2.16
CCDC7-206ENST00000476558 BCL9O00512 1426 aa28.52■■■□□ 2.16
CCDC7-206ENST00000476558 GCKRQ14397 625 aa28.51■■■□□ 2.15
CCDC7-206ENST00000476558 VSIG10Q8N0Z9 540 aa28.51■■■□□ 2.15
CCDC7-206ENST00000476558 PLBD2Q8NHP8 589 aa28.51■■■□□ 2.15
CCDC7-206ENST00000476558 PDE1AP54750 535 aa28.5■■■□□ 2.15
CCDC7-206ENST00000476558 MYD88Q99836 296 aa28.5■■■□□ 2.15
CCDC7-206ENST00000476558 ATG3Q9NT62 314 aa28.5■■■□□ 2.15
CCDC7-206ENST00000476558 ASAP1Q9ULH1 1129 aa28.5■■■□□ 2.15
CCDC7-206ENST00000476558 NUTM2BA6NNL0 878 aaPredicted RBP28.5■■■□□ 2.15
CCDC7-206ENST00000476558 NUTM2EB1AL46 878 aaPredicted RBP28.5■■■□□ 2.15
CCDC7-206ENST00000476558 TBC1D9Q6ZT07 1266 aa28.5■■■□□ 2.15
CCDC7-206ENST00000476558 NUTM2AQ8IVF1 878 aaPredicted RBP28.5■■■□□ 2.15
CCDC7-206ENST00000476558 SPATA31A5Q5VU36 1347 aa28.49■■■□□ 2.15
CCDC7-206ENST00000476558 SPATA31A7Q8IWB4 1347 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms