RNA–Protein interactions for RNA: ENST00000475283.2

SUSD1-206, Transcript of sushi domain containing 1, humanhuman

TSL 3

Gene SUSD1, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-206ENST00000475283 TEX13AQ9BXU3 409 aaPredicted RBP18.74■□□□□ 0.59
SUSD1-206ENST00000475283 ADAMTS7Q9UKP4 1686 aa18.73■□□□□ 0.59
SUSD1-206ENST00000475283 KCNA3P22001 575 aa18.73■□□□□ 0.59
SUSD1-206ENST00000475283 ZBTB1Q9Y2K1 713 aa18.73■□□□□ 0.59
SUSD1-206ENST00000475283 COL15A1P39059 1388 aa18.72■□□□□ 0.59
SUSD1-206ENST00000475283 A0A087WZG4 1122 aa18.72■□□□□ 0.59
SUSD1-206ENST00000475283 CANXP27824 592 aaKnown RBP18.72■□□□□ 0.59
SUSD1-206ENST00000475283 DALRD3Q5D0E6 543 aaKnown RBP18.72■□□□□ 0.59
SUSD1-206ENST00000475283 ZNF790Q6PG37 636 aa18.72■□□□□ 0.59
SUSD1-206ENST00000475283 KCPQ6ZWJ8 1503 aa18.72■□□□□ 0.59
SUSD1-206ENST00000475283 N4BP2Q86UW6 1770 aaPredicted RBP18.72■□□□□ 0.59
SUSD1-206ENST00000475283 PRKAR2BP31323 418 aa18.7■□□□□ 0.58
SUSD1-206ENST00000475283 NFIXQ14938 502 aa18.7■□□□□ 0.58
SUSD1-206ENST00000475283 ZNF496Q96IT1 587 aaPredicted RBP18.7■□□□□ 0.58
SUSD1-206ENST00000475283 KIAA1551Q9HCM1 1747 aa18.7■□□□□ 0.58
SUSD1-206ENST00000475283 PPP2R1AP30153 589 aa18.69■□□□□ 0.58
SUSD1-206ENST00000475283 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
SUSD1-206ENST00000475283 PHACTR3Q96KR7 559 aa18.69■□□□□ 0.58
SUSD1-206ENST00000475283 FMNL2Q96PY5 1086 aa18.69■□□□□ 0.58
SUSD1-206ENST00000475283 RSPH6AQ9H0K4 717 aa18.69■□□□□ 0.58
SUSD1-206ENST00000475283 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
SUSD1-206ENST00000475283 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
SUSD1-206ENST00000475283 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
SUSD1-206ENST00000475283 SERPINB2P05120 415 aa18.68■□□□□ 0.58
SUSD1-206ENST00000475283 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
SUSD1-206ENST00000475283 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
SUSD1-206ENST00000475283 BCL2L12Q9HB09 334 aa18.68■□□□□ 0.58
SUSD1-206ENST00000475283 CHRNA5P30532 468 aa18.67■□□□□ 0.58
SUSD1-206ENST00000475283 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
SUSD1-206ENST00000475283 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
SUSD1-206ENST00000475283 CEMIPQ8WUJ3 1361 aa18.67■□□□□ 0.58
SUSD1-206ENST00000475283 KIF3CO14782 793 aa18.65■□□□□ 0.58
SUSD1-206ENST00000475283 IL6STP40189 918 aaPredicted RBP18.65■□□□□ 0.58
SUSD1-206ENST00000475283 C9orf131Q5VYM1 1079 aa18.65■□□□□ 0.58
SUSD1-206ENST00000475283 UBR2Q8IWV8 1755 aa18.65■□□□□ 0.58
SUSD1-206ENST00000475283 HSPA6P17066 643 aa18.64■□□□□ 0.57
SUSD1-206ENST00000475283 ZNF330Q9Y3S2 320 aaPredicted RBP18.64■□□□□ 0.57
SUSD1-206ENST00000475283 BRCA1P38398 1863 aaKnown RBP18.63■□□□□ 0.57
SUSD1-206ENST00000475283 HTATSF1O43719 755 aaKnown RBP18.63■□□□□ 0.57
SUSD1-206ENST00000475283 BICDL1Q6ZP65 573 aa18.63■□□□□ 0.57
SUSD1-206ENST00000475283 H0YIN7 160 aa18.62■□□□□ 0.57
SUSD1-206ENST00000475283 TBC1D2BQ9UPU7 963 aa18.62■□□□□ 0.57
SUSD1-206ENST00000475283 ARFGEF1Q9Y6D6 1849 aa18.62■□□□□ 0.57
SUSD1-206ENST00000475283 TOMM70O94826 608 aa18.61■□□□□ 0.57
SUSD1-206ENST00000475283 A1BGP04217 495 aa18.61■□□□□ 0.57
SUSD1-206ENST00000475283 NEFMP07197 916 aa18.61■□□□□ 0.57
SUSD1-206ENST00000475283 TTLL6Q8N841 843 aa18.61■□□□□ 0.57
SUSD1-206ENST00000475283 PDZRN3Q9UPQ7 1066 aa18.61■□□□□ 0.57
SUSD1-206ENST00000475283 KCNQ3O43525 872 aa18.6■□□□□ 0.57
SUSD1-206ENST00000475283 TBC1D9BQ66K14 1250 aa18.6■□□□□ 0.57
SUSD1-206ENST00000475283 MCM10Q7L590 875 aa18.6■□□□□ 0.57
SUSD1-206ENST00000475283 C2CD5Q86YS7 1000 aa18.6■□□□□ 0.57
SUSD1-206ENST00000475283 RNF181Q9P0P0 153 aa18.6■□□□□ 0.57
SUSD1-206ENST00000475283 KDM2BQ8NHM5 1336 aa18.59■□□□□ 0.57
SUSD1-206ENST00000475283 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
SUSD1-206ENST00000475283 PDE6BP35913 854 aa18.59■□□□□ 0.57
SUSD1-206ENST00000475283 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
SUSD1-206ENST00000475283 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
SUSD1-206ENST00000475283 SIPA1L3O60292 1781 aaPredicted RBP18.58■□□□□ 0.57
SUSD1-206ENST00000475283 NRXN2Q9P2S2 1712 aa18.58■□□□□ 0.57
SUSD1-206ENST00000475283 BRIP1Q9BX63 1249 aa18.58■□□□□ 0.56
SUSD1-206ENST00000475283 TAF7Q15545 349 aaPredicted RBP18.57■□□□□ 0.56
SUSD1-206ENST00000475283 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
SUSD1-206ENST00000475283 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
SUSD1-206ENST00000475283 NMRK2Q9NPI5 230 aa18.57■□□□□ 0.56
SUSD1-206ENST00000475283 AFDNP55196 1824 aaKnown RBP18.57■□□□□ 0.56
SUSD1-206ENST00000475283 CARMIL3Q8ND23 1372 aa18.56■□□□□ 0.56
SUSD1-206ENST00000475283 NPHP1O15259 732 aa18.56■□□□□ 0.56
SUSD1-206ENST00000475283 CAMTA2O94983 1202 aa18.56■□□□□ 0.56
SUSD1-206ENST00000475283 CLEC4GQ6UXB4 293 aa18.56■□□□□ 0.56
SUSD1-206ENST00000475283 ZC3H4Q9UPT8 1303 aaKnown RBP18.55■□□□□ 0.56
SUSD1-206ENST00000475283 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
SUSD1-206ENST00000475283 PRR5LQ6MZQ0 368 aa18.55■□□□□ 0.56
SUSD1-206ENST00000475283 ZNF622Q969S3 477 aaKnown RBP eCLIP18.55■□□□□ 0.56
SUSD1-206ENST00000475283 PNNQ9H307 717 aaKnown RBP18.55■□□□□ 0.56
SUSD1-206ENST00000475283 LMNB1P20700 586 aa18.54■□□□□ 0.56
SUSD1-206ENST00000475283 APLP1P51693 650 aa18.54■□□□□ 0.56
SUSD1-206ENST00000475283 PNISRQ8TF01 805 aaKnown RBP18.54■□□□□ 0.56
SUSD1-206ENST00000475283 ZNF652Q9Y2D9 606 aa18.54■□□□□ 0.56
SUSD1-206ENST00000475283 ST5P78524 1137 aa18.53■□□□□ 0.56
SUSD1-206ENST00000475283 CNBD1Q8NA66 436 aa18.53■□□□□ 0.56
SUSD1-206ENST00000475283 RBM46Q8TBY0 533 aaKnown RBP18.53■□□□□ 0.56
SUSD1-206ENST00000475283 PRAMEF22A3QJZ6 481 aa18.52■□□□□ 0.56
SUSD1-206ENST00000475283 RGL2O15211 777 aa18.52■□□□□ 0.56
SUSD1-206ENST00000475283 RASSF7Q02833 373 aa18.52■□□□□ 0.56
SUSD1-206ENST00000475283 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
SUSD1-206ENST00000475283 CNKSR1Q969H4 720 aa18.51■□□□□ 0.55
SUSD1-206ENST00000475283 RRAGCQ9HB90 399 aa18.51■□□□□ 0.55
SUSD1-206ENST00000475283 FSTL1Q12841 308 aa18.5■□□□□ 0.55
SUSD1-206ENST00000475283 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
SUSD1-206ENST00000475283 PLEKHF1Q96S99 279 aa18.5■□□□□ 0.55
SUSD1-206ENST00000475283 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
SUSD1-206ENST00000475283 STYK1Q6J9G0 422 aa18.49■□□□□ 0.55
SUSD1-206ENST00000475283 TPTE2Q6XPS3 522 aa18.49■□□□□ 0.55
SUSD1-206ENST00000475283 NBPF5PQ86XG9 351 aaPredicted RBP18.49■□□□□ 0.55
SUSD1-206ENST00000475283 MIS18AQ9NYP9 233 aa18.49■□□□□ 0.55
SUSD1-206ENST00000475283 DLEC1Q9Y238 1755 aa18.49■□□□□ 0.55
SUSD1-206ENST00000475283 SBF1O95248 1867 aa18.49■□□□□ 0.55
SUSD1-206ENST00000475283 GLTPD2A6NH11 291 aa18.48■□□□□ 0.55
SUSD1-206ENST00000475283 NBPF26B4DH59 902 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms