RNA–Protein interactions for RNA: ENST00000474945.1

SPCS1-204, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 2

Gene SPCS1, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-204ENST00000474945 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
SPCS1-204ENST00000474945 ZNF496Q96IT1 587 aaPredicted RBP18.09■□□□□ 0.49
SPCS1-204ENST00000474945 ZBTB1Q9Y2K1 713 aa18.09■□□□□ 0.49
SPCS1-204ENST00000474945 RNF216Q9NWF9 866 aaPredicted RBP18.08■□□□□ 0.48
SPCS1-204ENST00000474945 STARD3NLO95772 234 aa18.07■□□□□ 0.48
SPCS1-204ENST00000474945 DCTN1Q14203 1278 aa18.07■□□□□ 0.48
SPCS1-204ENST00000474945 FMNL2Q96PY5 1086 aa18.07■□□□□ 0.48
SPCS1-204ENST00000474945 C10orf71Q711Q0 1435 aa18.06■□□□□ 0.48
SPCS1-204ENST00000474945 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
SPCS1-204ENST00000474945 WWC3Q9ULE0 1092 aa18.06■□□□□ 0.48
SPCS1-204ENST00000474945 PARP3Q9Y6F1 533 aa18.06■□□□□ 0.48
SPCS1-204ENST00000474945 ZPR1O75312 459 aa18.05■□□□□ 0.48
SPCS1-204ENST00000474945 YBX3P16989 372 aaKnown RBP eCLIP18.05■□□□□ 0.483e-9■□□□□ 9
SPCS1-204ENST00000474945 FKBP8Q14318 412 aa18.05■□□□□ 0.48
SPCS1-204ENST00000474945 KCNQ3O43525 872 aa18.04■□□□□ 0.48
SPCS1-204ENST00000474945 HTATSF1O43719 755 aaKnown RBP18.04■□□□□ 0.48
SPCS1-204ENST00000474945 PLEKHF1Q96S99 279 aa18.04■□□□□ 0.48
SPCS1-204ENST00000474945 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
SPCS1-204ENST00000474945 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
SPCS1-204ENST00000474945 PXDNLA1KZ92 1463 aa18.03■□□□□ 0.48
SPCS1-204ENST00000474945 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
SPCS1-204ENST00000474945 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
SPCS1-204ENST00000474945 DLG5Q8TDM6 1919 aa18.02■□□□□ 0.48
SPCS1-204ENST00000474945 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
SPCS1-204ENST00000474945 TEX13AQ9BXU3 409 aaPredicted RBP18.02■□□□□ 0.48
SPCS1-204ENST00000474945 KIF13BQ9NQT8 1826 aa18.02■□□□□ 0.47
SPCS1-204ENST00000474945 SCN7AQ01118 1682 aa18.02■□□□□ 0.47
SPCS1-204ENST00000474945 GRIN3BO60391 1043 aa18.01■□□□□ 0.47
SPCS1-204ENST00000474945 DDR1Q08345 913 aa18.01■□□□□ 0.47
SPCS1-204ENST00000474945 CHD4Q14839 1912 aa18.01■□□□□ 0.47
SPCS1-204ENST00000474945 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
SPCS1-204ENST00000474945 NARFQ9UHQ1 456 aa18■□□□□ 0.47
SPCS1-204ENST00000474945 KIAA1551Q9HCM1 1747 aa18■□□□□ 0.47
SPCS1-204ENST00000474945 A0A087WZG4 1122 aa17.99■□□□□ 0.47
SPCS1-204ENST00000474945 NPM2Q86SE8 214 aaKnown RBP17.99■□□□□ 0.47
SPCS1-204ENST00000474945 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
SPCS1-204ENST00000474945 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
SPCS1-204ENST00000474945 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
SPCS1-204ENST00000474945 PRKRIP1Q9H875 184 aaPredicted RBP17.98■□□□□ 0.47
SPCS1-204ENST00000474945 MIS18AQ9NYP9 233 aa17.98■□□□□ 0.47
SPCS1-204ENST00000474945 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
SPCS1-204ENST00000474945 KDM3BQ7LBC6 1761 aa17.98■□□□□ 0.47
SPCS1-204ENST00000474945 N4BP2Q86UW6 1770 aaPredicted RBP17.98■□□□□ 0.47
SPCS1-204ENST00000474945 PRAMEF22A3QJZ6 481 aa17.97■□□□□ 0.47
SPCS1-204ENST00000474945 POLRMTO00411 1230 aaKnown RBP17.97■□□□□ 0.47
SPCS1-204ENST00000474945 A1BGP04217 495 aa17.97■□□□□ 0.47
SPCS1-204ENST00000474945 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
SPCS1-204ENST00000474945 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
SPCS1-204ENST00000474945 CCDC146Q8IYE0 955 aa17.97■□□□□ 0.47
SPCS1-204ENST00000474945 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
SPCS1-204ENST00000474945 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
SPCS1-204ENST00000474945 TGFB2P61812 414 aa17.96■□□□□ 0.47
SPCS1-204ENST00000474945 NFIXQ14938 502 aa17.96■□□□□ 0.47
SPCS1-204ENST00000474945 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.47
SPCS1-204ENST00000474945 A0A0G2JLW4 131 aa17.95■□□□□ 0.46
SPCS1-204ENST00000474945 DPEP1P16444 411 aa17.95■□□□□ 0.46
SPCS1-204ENST00000474945 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
SPCS1-204ENST00000474945 ZNF784Q8NCA9 323 aaPredicted RBP17.95■□□□□ 0.46
SPCS1-204ENST00000474945 BCORQ6W2J9 1755 aa17.94■□□□□ 0.46
SPCS1-204ENST00000474945 TM4SF1P30408 202 aa17.94■□□□□ 0.46
SPCS1-204ENST00000474945 RIPK4P57078 832 aa17.94■□□□□ 0.46
SPCS1-204ENST00000474945 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
SPCS1-204ENST00000474945 TBC1D2BQ9UPU7 963 aa17.94■□□□□ 0.46
SPCS1-204ENST00000474945 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
SPCS1-204ENST00000474945 USP16Q9Y5T5 823 aa17.94■□□□□ 0.46
SPCS1-204ENST00000474945 BCS1LQ9Y276 419 aa17.93■□□□□ 0.46
SPCS1-204ENST00000474945 TMPOP42166 694 aaKnown RBP17.92■□□□□ 0.46
SPCS1-204ENST00000474945 DZIP3Q86Y13 1208 aaKnown RBP17.92■□□□□ 0.46
SPCS1-204ENST00000474945 NRXN2Q9P2S2 1712 aa17.92■□□□□ 0.46
SPCS1-204ENST00000474945 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
SPCS1-204ENST00000474945 SERPINB2P05120 415 aa17.91■□□□□ 0.46
SPCS1-204ENST00000474945 NEUROD2Q15784 382 aa17.91■□□□□ 0.46
SPCS1-204ENST00000474945 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
SPCS1-204ENST00000474945 TSPYL4Q9UJ04 414 aa17.91■□□□□ 0.46
SPCS1-204ENST00000474945 CARMIL3Q8ND23 1372 aa17.91■□□□□ 0.46
SPCS1-204ENST00000474945 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
SPCS1-204ENST00000474945 CHRNA5P30532 468 aa17.9■□□□□ 0.46
SPCS1-204ENST00000474945 RUNDC1Q96C34 613 aa17.9■□□□□ 0.46
SPCS1-204ENST00000474945 BRCA1P38398 1863 aaKnown RBP17.9■□□□□ 0.46
SPCS1-204ENST00000474945 NPHP1O15259 732 aa17.89■□□□□ 0.45
SPCS1-204ENST00000474945 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
SPCS1-204ENST00000474945 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
SPCS1-204ENST00000474945 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
SPCS1-204ENST00000474945 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
SPCS1-204ENST00000474945 NBPF15Q8N660 670 aa17.88■□□□□ 0.45
SPCS1-204ENST00000474945 PIM2Q9P1W9 311 aa17.88■□□□□ 0.45
SPCS1-204ENST00000474945 ZNF652Q9Y2D9 606 aa17.88■□□□□ 0.45
SPCS1-204ENST00000474945 ATP10DQ9P241 1426 aa17.88■□□□□ 0.45
SPCS1-204ENST00000474945 ZNF316A6NFI3 1004 aaPredicted RBP17.87■□□□□ 0.45
SPCS1-204ENST00000474945 GIGYF1O75420 1035 aaPredicted RBP17.87■□□□□ 0.45
SPCS1-204ENST00000474945 DALRD3Q5D0E6 543 aaKnown RBP17.87■□□□□ 0.45
SPCS1-204ENST00000474945 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
SPCS1-204ENST00000474945 ADCY9O60503 1353 aa17.86■□□□□ 0.45
SPCS1-204ENST00000474945 KCNA3P22001 575 aa17.85■□□□□ 0.45
SPCS1-204ENST00000474945 CNBD1Q8NA66 436 aa17.85■□□□□ 0.45
SPCS1-204ENST00000474945 DLEC1Q9Y238 1755 aa17.85■□□□□ 0.45
SPCS1-204ENST00000474945 ARFGEF1Q9Y6D6 1849 aa17.84■□□□□ 0.45
SPCS1-204ENST00000474945 PRR5LQ6MZQ0 368 aa17.84■□□□□ 0.45
SPCS1-204ENST00000474945 ARHGAP27Q6ZUM4 889 aa17.84■□□□□ 0.45
SPCS1-204ENST00000474945 C2CD5Q86YS7 1000 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms