RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 TAF7Q15545 349 aaPredicted RBP9.54□□□□□ -0.88
LSAMP-203ENST00000474851 NFE2L2Q16236 605 aa9.54□□□□□ -0.88
LSAMP-203ENST00000474851 TTC5Q8N0Z6 440 aa9.54□□□□□ -0.88
LSAMP-203ENST00000474851 KLHL34Q8N239 644 aa9.54□□□□□ -0.88
LSAMP-203ENST00000474851 RTF1Q92541 710 aaKnown RBP9.54□□□□□ -0.88
LSAMP-203ENST00000474851 HEG1Q9ULI3 1381 aa9.53□□□□□ -0.88
LSAMP-203ENST00000474851 YBX3P16989 372 aaKnown RBP eCLIP9.53□□□□□ -0.88
LSAMP-203ENST00000474851 EIF5P55010 431 aaKnown RBP9.53□□□□□ -0.88
LSAMP-203ENST00000474851 FMNL2Q96PY5 1086 aa9.53□□□□□ -0.88
LSAMP-203ENST00000474851 TEX13AQ9BXU3 409 aaPredicted RBP9.53□□□□□ -0.88
LSAMP-203ENST00000474851 BCL2L12Q9HB09 334 aa9.53□□□□□ -0.88
LSAMP-203ENST00000474851 MIS18AQ9NYP9 233 aa9.53□□□□□ -0.88
LSAMP-203ENST00000474851 USP16Q9Y5T5 823 aa9.53□□□□□ -0.88
LSAMP-203ENST00000474851 C4BP0C0L5 1744 aa9.53□□□□□ -0.88
LSAMP-203ENST00000474851 USP42Q9H9J4 1324 aaKnown RBP9.53□□□□□ -0.88
LSAMP-203ENST00000474851 KCPQ6ZWJ8 1503 aa9.52□□□□□ -0.88
LSAMP-203ENST00000474851 PRAMEF22A3QJZ6 481 aa9.52□□□□□ -0.89
LSAMP-203ENST00000474851 A1BGP04217 495 aa9.52□□□□□ -0.89
LSAMP-203ENST00000474851 CENPBP07199 599 aaPredicted RBP9.52□□□□□ -0.89
LSAMP-203ENST00000474851 YY1P25490 414 aa9.52□□□□□ -0.89
LSAMP-203ENST00000474851 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
LSAMP-203ENST00000474851 GPR162Q16538 588 aa9.52□□□□□ -0.89
LSAMP-203ENST00000474851 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.89
LSAMP-203ENST00000474851 PNNQ9H307 717 aaKnown RBP9.52□□□□□ -0.89
LSAMP-203ENST00000474851 NARFQ9UHQ1 456 aa9.52□□□□□ -0.89
LSAMP-203ENST00000474851 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
LSAMP-203ENST00000474851 SNRPA1P09661 255 aaKnown RBP9.51□□□□□ -0.89
LSAMP-203ENST00000474851 DDR1Q08345 913 aa9.51□□□□□ -0.89
LSAMP-203ENST00000474851 POLA2Q14181 598 aa9.51□□□□□ -0.89
LSAMP-203ENST00000474851 USPL1Q5W0Q7 1092 aa9.51□□□□□ -0.89
LSAMP-203ENST00000474851 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
LSAMP-203ENST00000474851 KAT6BQ8WYB5 2073 aa9.51□□□□□ -0.89
LSAMP-203ENST00000474851 POLRMTO00411 1230 aaKnown RBP9.5□□□□□ -0.89
LSAMP-203ENST00000474851 ZPR1O75312 459 aa9.5□□□□□ -0.89
LSAMP-203ENST00000474851 KCNA3P22001 575 aa9.5□□□□□ -0.89
LSAMP-203ENST00000474851 TMPOP42166 694 aaKnown RBP9.5□□□□□ -0.89
LSAMP-203ENST00000474851 RIPK4P57078 832 aa9.5□□□□□ -0.89
LSAMP-203ENST00000474851 TGFB2P61812 414 aa9.5□□□□□ -0.89
LSAMP-203ENST00000474851 NFIXQ14938 502 aa9.5□□□□□ -0.89
LSAMP-203ENST00000474851 ADAMTS7Q9UKP4 1686 aa9.5□□□□□ -0.89
LSAMP-203ENST00000474851 ITGB4P16144 1822 aa9.49□□□□□ -0.89
LSAMP-203ENST00000474851 ZNF316A6NFI3 1004 aaPredicted RBP9.49□□□□□ -0.89
LSAMP-203ENST00000474851 NBPF26B4DH59 902 aa9.49□□□□□ -0.89
LSAMP-203ENST00000474851 NEFMP07197 916 aa9.49□□□□□ -0.89
LSAMP-203ENST00000474851 IL6STP40189 918 aaPredicted RBP9.49□□□□□ -0.89
LSAMP-203ENST00000474851 EIF4A1P60842 406 aaKnown RBP9.49□□□□□ -0.89
LSAMP-203ENST00000474851 NBPF10Q6P3W6 841 aaKnown RBP9.49□□□□□ -0.89
LSAMP-203ENST00000474851 NBPF15Q8N660 670 aa9.49□□□□□ -0.89
LSAMP-203ENST00000474851 PARP3Q9Y6F1 533 aa9.49□□□□□ -0.89
LSAMP-203ENST00000474851 C5P01031 1676 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 A0A087WZG4 1122 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 A0A0G2JLW4 131 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 GRIN3BO60391 1043 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
LSAMP-203ENST00000474851 PIP4K2AP48426 406 aaPredicted RBP9.48□□□□□ -0.89
LSAMP-203ENST00000474851 CCDC184Q52MB2 194 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 CCDC146Q8IYE0 955 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 PNISRQ8TF01 805 aaKnown RBP9.48□□□□□ -0.89
LSAMP-203ENST00000474851 RUNDC1Q96C34 613 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 TBC1D2BQ9UPU7 963 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 RRP7AQ9Y3A4 280 aaKnown RBP9.48□□□□□ -0.89
LSAMP-203ENST00000474851 MAPK8IP3Q9UPT6 1336 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 COL15A1P39059 1388 aa9.48□□□□□ -0.89
LSAMP-203ENST00000474851 CAMTA2O94983 1202 aa9.47□□□□□ -0.89
LSAMP-203ENST00000474851 DPEP1P16444 411 aa9.47□□□□□ -0.89
LSAMP-203ENST00000474851 WWC3Q9ULE0 1092 aa9.47□□□□□ -0.89
LSAMP-203ENST00000474851 QSER1Q2KHR3 1735 aa9.47□□□□□ -0.89
LSAMP-203ENST00000474851 ZNF831Q5JPB2 1677 aa9.46□□□□□ -0.89
LSAMP-203ENST00000474851 COL24A1Q17RW2 1714 aa9.46□□□□□ -0.89
LSAMP-203ENST00000474851 SERPINB2P05120 415 aa9.46□□□□□ -0.9
LSAMP-203ENST00000474851 WDR43Q15061 677 aaKnown RBP eCLIP9.46□□□□□ -0.9
LSAMP-203ENST00000474851 TBC1D9BQ66K14 1250 aa9.46□□□□□ -0.9
LSAMP-203ENST00000474851 ZNF784Q8NCA9 323 aaPredicted RBP9.46□□□□□ -0.9
LSAMP-203ENST00000474851 BABAM1Q9NWV8 329 aa9.46□□□□□ -0.9
LSAMP-203ENST00000474851 C10orf71Q711Q0 1435 aa9.46□□□□□ -0.9
LSAMP-203ENST00000474851 CHL1O00533 1208 aa9.45□□□□□ -0.9
LSAMP-203ENST00000474851 NEUROD2Q15784 382 aa9.45□□□□□ -0.9
LSAMP-203ENST00000474851 APAF1O14727 1248 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 CHRNA5P30532 468 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 CLEC4GQ6UXB4 293 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 BICDL1Q6ZP65 573 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 LRP10Q7Z4F1 713 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 DZIP3Q86Y13 1208 aaKnown RBP9.44□□□□□ -0.9
LSAMP-203ENST00000474851 TSPYL4Q9UJ04 414 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
LSAMP-203ENST00000474851 PXDNLA1KZ92 1463 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 TUBGCP6Q96RT7 1819 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 UBR3Q6ZT12 1888 aa9.44□□□□□ -0.9
LSAMP-203ENST00000474851 TAF1LQ8IZX4 1826 aa9.43□□□□□ -0.9
LSAMP-203ENST00000474851 SCN11AQ9UI33 1791 aa9.43□□□□□ -0.9
LSAMP-203ENST00000474851 LMOD3Q0VAK6 560 aa9.43□□□□□ -0.9
LSAMP-203ENST00000474851 PDIA6Q15084 440 aa9.43□□□□□ -0.9
LSAMP-203ENST00000474851 BCS1LQ9Y276 419 aa9.43□□□□□ -0.9
LSAMP-203ENST00000474851 MYH14Q7Z406 1995 aaKnown RBP9.43□□□□□ -0.9
LSAMP-203ENST00000474851 TJP1Q07157 1748 aa9.42□□□□□ -0.9
LSAMP-203ENST00000474851 CICQ96RK0 1608 aaPredicted RBP9.42□□□□□ -0.9
LSAMP-203ENST00000474851 RGL2O15211 777 aa9.42□□□□□ -0.9
LSAMP-203ENST00000474851 ZNF853P0CG23 659 aa9.42□□□□□ -0.9
LSAMP-203ENST00000474851 HLFQ16534 295 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms